CV887202

Overview
NameCV887202
Unique NameCV887202
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length879
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV887202 vs. ExPASy Swiss-Prot
Match: MCFW_DICDI (Mitochondrial substrate carrier family protein W OS=Dictyostelium discoideum GN=mcfW PE=3 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 3.415e-37
Identity = 92/250 (36.80%), Postives = 134/250 (53.60%), Query Frame = 2
Query:  140 FMCPLDVIKTRLQVHGLPEGTHXXXXXXXXXXXLQNILKNEG-LKGLYRGLSPTLLALLPNWAVYFAVYERLKGLLRTHGDGNSQLSVGKN---MXXXXXXXXXXXXXXNPLWVVKTRLQTQGMRSNVVPYKSILSALRRISHEEGMRGLYSGILPSLAGVSHVAIQFPAYERIKHYMAKKDDTDVDKLNPGSVMIASSIAKVLASVMTYPHEVVRSRLQEQGQNRKVDVQYAGVVDCVKKVFQKEGFPG 877
            F  PLDVIKT LQV      T            +++IL  +G +K LY GL PTL+  +P+WAVYF+ Y   K L     D +S L        M              +P+W++KTR  TQ M      Y+ I+ ++  I HEEG RGLY G+ PSL GV HV +QFP YE+ K  + +K+     +L    +MIASS++K++ASV+ YPHEV+R+R Q+   +         ++   K++ ++EG+ G
Sbjct:   53 FTTPLDVIKTTLQVDNSSNKT--------IMSTVKSILDRKGGVKNLYLGLKPTLVGQIPSWAVYFSTYTFCKELFTKENDKHSLLEKESPLIFMTSAIIAGAATSICTSPIWLIKTRFITQEMVGRQKKYRGIVHSMVSIYHEEGFRGLYKGLGPSLLGVLHVGVQFPLYEKFKSILKEKNKN--KELGIVEIMIASSVSKIIASVVAYPHEVLRARSQDSSPDSPNRTYRGNIIQMFKQIVREEGWRG 292          
BLAST of CV887202 vs. ExPASy Swiss-Prot
Match: YEA6_YEAST (Probable mitochondrial carrier YEL006W OS=Saccharomyces cerevisiae GN=YEL006W PE=1 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 5.453e-35
Identity = 89/250 (35.60%), Postives = 133/250 (53.20%), Query Frame = 2
Query:  143 MCPLDVIKTRLQVHGLPEGTHXXXXXXXXXXXLQNILKNEGLKGLYRGLSPTLLALLPNWAVYFAVYERLKGLLRTHGDGNSQLSVGKNMXXXXXXXXXXXXXXNPLWVVKTRLQTQ-GMRSNVVPYKSILSALRRISHEEGMRGLYSGILPSLAGVSHVAIQFPAYERIK---HYMAKKD-DTDVDKLNPGSVMIASSIAKVLASVMTYPHEVVRSRLQEQGQNRKVDVQYAGVVDCVKKVFQKEGFPG 877
            +CP DV KTRLQ  GL   TH              I K+EG  GLY+GL PT+L  +P   +YF+VY+  +         +  LS   N               NP+WVVKTRL  Q G+      YK  +   R+I  +EG + LY+G++P+L G+ +VAIQFP YE +K    Y    D  TDV   N   +++AS ++K++AS +TYPHE++R+R+Q +        ++  ++  +K  +++EGF G
Sbjct:   56 VCPFDVAKTRLQAQGLQNMTHQSQHYKGFFGTFATIFKDEGAAGLYKGLQPTVLGYIPTLMIYFSVYDFCRKYSVDIFPHSPFLS---NASSAITAGAISTVATNPIWVVKTRLMLQTGIGKYSTHYKGTIDTFRKIIQQEGAKALYAGLVPALLGMLNVAIQFPLYENLKIRFGYSESTDVSTDVTSSNFQKLILASMLSKMVASTVTYPHEILRTRMQLKSDLPNTVQRH--LLPLIKITYRQEGFAG 300          
BLAST of CV887202 vs. ExPASy Swiss-Prot
Match: YIA6_YEAST (Uncharacterized mitochondrial carrier YIL006W OS=Saccharomyces cerevisiae GN=YIL006W PE=1 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 3.534e-34
Identity = 88/249 (35.34%), Postives = 135/249 (54.22%), Query Frame = 2
Query:  143 MCPLDVIKTRLQVHGLPEGTHXXXXXXXXXXXLQNILKNEGLKGLYRGLSPTLLALLPNWAVYFAVYERLKGLLRTHGDGNSQLSVGKNMXXXXXXXXXXXXXXNPLWVVKTRLQTQG-MRSNVVPYKSILSALRRISHEEGMRGLYSGILPSLAGVSHVAIQFPAYERIK---HYMAKKDDTDVDKLNPGSVMIASSIAKVLASVMTYPHEVVRSRLQEQGQNRKVDVQYAGVVDCVKKVFQKEGFPG 877
            +CPLDV KTRLQ  GL +              L  I+++EG +GLY+GL P +L   P W +YF+VYE  K     HG    Q                     NP+WVVKTRL  Q  +  +   YK    A R++ ++EG + LY+G++PSL G+ HVAI FP YE +K   H  +++++T  + +N   +++ASS++K++AS +TYPHE++R+R+Q +      D     +   +K  + +EG  G
Sbjct:   95 VCPLDVAKTRLQAQGL-QTRFENPYYRGIMGTLSTIVRDEGPRGLYKGLVPIVLGYFPTWMIYFSVYEFSKKFF--HGIF-PQFDFVAQSCAAITAGAASTTLTNPIWVVKTRLMLQSNLGEHPTHYKGTFDAFRKLFYQEGFKALYAGLVPSLLGLFHVAIHFPIYEDLKVRFHCYSRENNT--NSINLQRLIMASSVSKMIASAVTYPHEILRTRMQLKSD--IPDSIQRRLFPLIKATYAQEGLKG 335          
BLAST of CV887202 vs. ExPASy Swiss-Prot
Match: MCFM_DICDI (Mitochondrial substrate carrier family protein M OS=Dictyostelium discoideum GN=mcfM PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 8.148e-31
Identity = 84/249 (33.73%), Postives = 125/249 (50.20%), Query Frame = 2
Query:  140 FMCPLDVIKTRLQVHGLPEGTHXXXXXXXXXXXL-QNILKNEGLKGLYRGLSPTLLALLPNWAVYFAVYERLKGLLRTHGDGNSQLSVGKNMXXXXXXXXXXXXXXNPLWVVKTRLQTQGMRSNVVPYKSILSALRRISHEEGMRGLYSGILPSLAGVSHVAIQFPAYERIKHYMAKKDDTDVDKLNPGSVMIASSIAKVLASVMTYPHEVVRSRLQEQGQ--NRKVDVQYAGVVDCVKKVFQKEGFPG 877
            F+ P D +K RLQ  G   G               +N+LKNEG+K  +RG SPT++A    W  Y   YE  K +L++  +  +QL+   +               NP++++KTR+Q Q   S    Y  I   +++    EG +GLY G++PSL    H  IQ  +YE IK Y +      +D LN   + IASSI+K LAS + YP +VV++RLQ++    N+     Y G  D + K+ + EG  G
Sbjct:   24 FLQPFDFLKIRLQGSGFASGGDLNKFKRVGVIDTCKNVLKNEGIKQFWRGSSPTIVASGIAWGTYMHFYEAYKNILKSKYNV-TQLNTFDHFICAVGASATQVFITNPIFLIKTRMQLQTPGSANY-YTGIFDGIKKTVKVEGFKGLYKGVIPSLWLTFHGGIQMSSYEHIKFYFSSNSGKSLDSLNASEIFIASSISKFLASTILYPFQVVKTRLQDERNIPNQNNVRVYNGTKDVIFKILKNEGIIG 270          
BLAST of CV887202 vs. ExPASy Swiss-Prot
Match: MFTC_MOUSE (Mitochondrial folate transporter/carrier OS=Mus musculus GN=Slc25a32 PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.301e-28
Identity = 86/247 (34.82%), Postives = 125/247 (50.61%), Query Frame = 2
Query:  149 PLDVIKTRLQVHGLPEGTHXXXXXXXXXXXLQNILKNEGLKGLYRGLSPTLLALLPNWAVYFAVYERLKGLLRTHGDGNSQLSVGKNMXXXXXXXXXXXXXXNPLWVVKTRLQTQ--GMRS-NVVPYKSILSALRRISHEEGMRGLYSGILPSLAGVSHVAIQFPAYERIK-HYMAKKDDTDVDKLNPGSVMIASSIAKVLASVMTYPHEVVRSRLQEQGQNRKVDVQYAGVVDCVKKVFQKEGFPG 877
            PLD++K R  V    +G             L  I K +GL+GLY+G++P +     +W +YF  Y  +K   +T G    QL   + +              NPLWV KTRL  Q  G+ S +   YK +  AL +I   EG+RGLY G +P L G SH A+QF AYE +K  Y    +     +L+    +  ++++K+ A   TYP++VVR+RLQ+Q       V Y GV D + K ++KEG  G
Sbjct:   42 PLDLVKIRFAVS---DGLEVRPKYKGILHCLATIWKVDGLRGLYQGVTPNVWGAGLSWGLYFFFYNAIKSY-KTEGRAE-QLEPLEYLVSAAEAGAMTLCITNPLWVTKTRLMLQYGGVASPSQRQYKGMFDALVKIYKYEGVRGLYKGFVPGLFGTSHGALQFMAYELLKLKYNKHINRLPEAQLSTAEYISVAALSKIFAVAATYPYQVVRARLQDQ------HVSYGGVTDVITKTWRKEGIGG 277          
BLAST of CV887202 vs. ExPASy Swiss-Prot
Match: MFTC_MACFA (Mitochondrial folate transporter/carrier OS=Macaca fascicularis GN=SLC25A32 PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.878e-27
Identity = 82/247 (33.20%), Postives = 124/247 (50.20%), Query Frame = 2
Query:  149 PLDVIKTRLQVHGLPEGTHXXXXXXXXXXXLQNILKNEGLKGLYRGLSPTLLALLPNWAVYFAVYERLKGLLRTHGDGNSQLSVGKNMXXXXXXXXXXXXXXNPLWVVKTRLQTQG---MRSNVVPYKSILSALRRISHEEGMRGLYSGILPSLAGVSHVAIQFPAYERIK-HYMAKKDDTDVDKLNPGSVMIASSIAKVLASVMTYPHEVVRSRLQEQGQNRKVDVQYAGVVDCVKKVFQKEGFPG 877
            PLD++K R  V    +G             L  I K +GL+GLY+G++P +     +W +YF  Y  +K   +T G    +L   + +              NPLWV KTRL  Q    + S    YK +   L +I   EG+RGLY G +P L G SH A+QF AYE +K  Y    +     +L+    +  ++++K+ A   TYP++VVR+RLQ+Q       + Y+GV+D + K ++KEG  G
Sbjct:   42 PLDLVKIRFAVS---DGLELRPKYNGILHCLTTIWKLDGLRGLYQGVTPNVWGAGLSWGLYFFFYNAIKSY-KTEGRAE-RLEATEYLVSAAEAGAMTLCITNPLWVTKTRLMLQYDAVINSPHRQYKGMFDTLVKIYKYEGVRGLYKGFVPGLFGTSHGALQFMAYELLKLKYNQHINRLPEAQLSTVEYISVAALSKIFAVAATYPYQVVRARLQDQ------HMFYSGVIDVITKTWRKEGIGG 277          
BLAST of CV887202 vs. ExPASy Swiss-Prot
Match: MFTC_HUMAN (Mitochondrial folate transporter/carrier OS=Homo sapiens GN=SLC25A32 PE=1 SV=2)

HSP 1 Score: 123.25 bits (308), Expect = 1.878e-27
Identity = 82/247 (33.20%), Postives = 124/247 (50.20%), Query Frame = 2
Query:  149 PLDVIKTRLQVHGLPEGTHXXXXXXXXXXXLQNILKNEGLKGLYRGLSPTLLALLPNWAVYFAVYERLKGLLRTHGDGNSQLSVGKNMXXXXXXXXXXXXXXNPLWVVKTRLQTQG---MRSNVVPYKSILSALRRISHEEGMRGLYSGILPSLAGVSHVAIQFPAYERIK-HYMAKKDDTDVDKLNPGSVMIASSIAKVLASVMTYPHEVVRSRLQEQGQNRKVDVQYAGVVDCVKKVFQKEGFPG 877
            PLD++K R  V    +G             L  I K +GL+GLY+G++P +     +W +YF  Y  +K   +T G    +L   + +              NPLWV KTRL  Q    + S    YK +   L +I   EG+RGLY G +P L G SH A+QF AYE +K  Y    +     +L+    +  ++++K+ A   TYP++VVR+RLQ+Q       + Y+GV+D + K ++KEG  G
Sbjct:   42 PLDLVKIRFAVS---DGLELRPKYNGILHCLTTIWKLDGLRGLYQGVTPNIWGAGLSWGLYFFFYNAIKSY-KTEGRAE-RLEATEYLVSAAEAGAMTLCITNPLWVTKTRLMLQYDAVVNSPHRQYKGMFDTLVKIYKYEGVRGLYKGFVPGLFGTSHGALQFMAYELLKLKYNQHINRLPEAQLSTVEYISVAALSKIFAVAATYPYQVVRARLQDQ------HMFYSGVIDVITKTWRKEGVGG 277          
BLAST of CV887202 vs. ExPASy Swiss-Prot
Match: S2533_DANRE (Solute carrier family 25 member 33 OS=Danio rerio GN=slc25a33 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 7.138e-27
Identity = 87/251 (34.66%), Postives = 123/251 (49.00%), Query Frame = 2
Query:  146 CPLDVIKTRLQVHGL--------PEGT-------HXXXXXXXXXXXLQNILKNEGLKGLYRGLSPTLLALLPNWAVYFAVYERLKGLLRTHGDGNSQLSVGKNMXXXXXXXXXXXXXXNPLWVVKTRLQTQGMRSNVVPYKSILSALRRISHEEGMRGLYSGILPSLAGVSHVAIQFPAYERIKHYMAKK----DDTDVDKLNPG--SVMIASSIAKVLASVMTYPHEVVRSRLQEQGQNRKVDVQYAGVV 835
            CPL+V+KTRLQ  GL          GT                   L++IL+ EG + L+RGL P L+ + P+ A+YFA Y + K         NS +    +M              NP+W+VKTR+Q +  ++      + L   R +   EGMRG Y G+  S AG+S   I F  YE +K Y+A+      DTD DK       +M A++ AK  AS + YPHEV+R+RL+E+G   K   Q A +V
Sbjct:   25 CPLEVLKTRLQSSGLTLRPVFQVQLGTLNGAGVIRPGSVTPGLLQVLRSILEKEGPRSLFRGLGPNLVGVAPSRAIYFAAYSKSKETFNGIFVPNSGV---VHMSSAGFAAFITNSLMNPIWMVKTRMQLE-KKARGEKKMNALQCARYVYKTEGMRGFYRGLTASYAGISETMICFLIYETLKKYLAQSRFTTPDTDNDKGASDFLGLMFAAAFAKGCASCIAYPHEVIRTRLREEGSKYKYFFQTARLV 271          
BLAST of CV887202 vs. ExPASy Swiss-Prot
Match: S2533_BOVIN (Solute carrier family 25 member 33 OS=Bos taurus GN=SLC25A33 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 7.138e-27
Identity = 86/267 (32.21%), Postives = 129/267 (48.31%), Query Frame = 2
Query:  140 FMCPLDVIKTRLQ-------------VH-GLPEGTHXXXXXXXXXXXLQ---NILKNEGLKGLYRGLSPTLLALLPNWAVYFAVYERLKGLLRTHGDGNSQLSVGKNMXXXXXXXXXXXXXXNPLWVVKTRLQTQGMRSNVVPYKSILSALRRISHEEGMRGLYSGILPSLAGVSHVAIQFPAYERIKHYM------AKKDDTDVDKLNPGSVMIASSIAKVLASVMTYPHEVVRSRLQEQGQNRKVDVQYAGVVDCVKKVFQKEGF 871
            F CPL+VIKTRLQ             VH G   G             LQ   +IL+ EG + L+RGL P L+ + P+ AVYFA Y + K         NS +    ++              NP+W+VKTR+Q +  +       + L   R +   EG+RG Y G+  S AG+S   I F  YE +K Y+      +  + T+ +  N   +M A++++K  AS + YPHEV+R+RL+E+G       +Y   V   + VF++EG+
Sbjct:   28 FTCPLEVIKTRLQSSRLALRTVYYPQVHLGTISGAGVVRQTSVTPGLLQVLKSILEKEGPRSLFRGLGPNLVGVAPSRAVYFACYSKAKEQFNGVFVPNSNIV---HVFSAGSAAFVTNSLMNPIWMVKTRMQLE-RKVRGSKQMNTLQCARYVYQTEGIRGFYRGLTASYAGISETIICFAIYESLKKYLKEAPLASSTNGTEKNSTNFFGLMAAAALSKGCASCVAYPHEVIRTRLREEGS------KYKSFVQTARLVFREEGY 284          
BLAST of CV887202 vs. ExPASy Swiss-Prot
Match: S2533_MOUSE (Solute carrier family 25 member 33 OS=Mus musculus GN=Slc25a33 PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.218e-26
Identity = 91/271 (33.58%), Postives = 131/271 (48.34%), Query Frame = 2
Query:  140 FMCPLDVIKTRLQ-------------VH-GLPEGTHXXXXXXXXXXXLQ---NILKNEGLKGLYRGLSPTLLALLPNWAVYFAVY----ERLKGLLRTHGDGNSQLSVGKNMXXXXXXXXXXXXXXNPLWVVKTRLQTQGMRSNVVPYKSILSALRRISHEEGMRGLYSGILPSLAGVSHVAIQFPAYERIKHYMAKK---DDTD-VDKLNPG--SVMIASSIAKVLASVMTYPHEVVRSRLQEQGQNRKVDVQYAGVVDCVKKVFQKEGF 871
            F CPL+VIKTRLQ             VH G   G             LQ   +IL+ EG K L+RGL P L+ + P+ AVYFA Y    E+  G+   + +    LS G                 NP+W+VKTR+Q +  +       + L   RR+   EG+RG Y G+  S AG+S   I F  YE +K  +        TD  +K + G   +M A++++K  AS + YPHEV+R+RL+E+G       +Y   V   + VF++EG+
Sbjct:   28 FTCPLEVIKTRLQSSRLALRTVYYPQVHLGTISGAGMVRPTSVTPGLLQVLKSILEKEGPKSLFRGLGPNLVGVAPSRAVYFACYSKAKEQFNGIFVPNSNTVHILSAGS-------AAFVTNTLMNPIWMVKTRMQLE-RKVRGCKQMNTLQCARRVYQTEGVRGFYRGLTASYAGISETIICFAIYESLKKCLKDAPIVSSTDGAEKSSSGFFGLMAAAAVSKGCASCIAYPHEVIRTRLREEGS------KYRSFVQTARLVFREEGY 284          
The following BLAST results are available for this feature:
BLAST of CV887202 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 148
Match NameE-valueIdentityDescription
MCFW_DICDI3.415e-3736.80Mitochondrial substrate carrier family protein W O... [more]
YEA6_YEAST5.453e-3535.60Probable mitochondrial carrier YEL006W OS=Saccharo... [more]
YIA6_YEAST3.534e-3435.34Uncharacterized mitochondrial carrier YIL006W OS=S... [more]
MCFM_DICDI8.148e-3133.73Mitochondrial substrate carrier family protein M O... [more]
MFTC_MOUSE1.301e-2834.82Mitochondrial folate transporter/carrier OS=Mus mu... [more]
MFTC_MACFA1.878e-2733.20Mitochondrial folate transporter/carrier OS=Macaca... [more]
MFTC_HUMAN1.878e-2733.20Mitochondrial folate transporter/carrier OS=Homo s... [more]
S2533_DANRE7.138e-2734.66Solute carrier family 25 member 33 OS=Danio rerio ... [more]
S2533_BOVIN7.138e-2732.21Solute carrier family 25 member 33 OS=Bos taurus G... [more]
S2533_MOUSE1.218e-2633.58Solute carrier family 25 member 33 OS=Mus musculus... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_029H01_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_029_T3_H01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV887202 ID=CV887202; Name=CV887202; organism=Citrus sinensis; type=EST; length=879bp
CTCTTTCGAAATTGTAGAAGACATGGTGAGTGAAAAAGGAGGTGGAGACG
CCGATGGAGAATCTTTACAAGCTCTAACACGCAGGGTCTTACTTTCCCAC
GCGGCAGCTGGAGCTGCTGCTGGTGCAATTGCGGCAACATTTATGTGCCC
GTTGGATGTGATCAAGACAAGGTTACAGGTACATGGCCTTCCCGAAGGCA
CTCACTCTGGACGCAGAGGTAGTATCATTATAATAAGTTTACAGAACATA
TTGAAGAATGAAGGTCTGAAGGGATTGTATCGTGGTCTTTCACCGACATT
ACTAGCATTACTTCCAAATTGGGCTGTATACTTCGCAGTTTATGAGCGAT
TAAAAGGTCTTCTCCGAACACATGGGGATGGCAATAGTCAACTCTCAGTT
GGGAAAAATATGATAGCTGCAGCTGGTGCTGGGGCTGCTACAGCCATCAC
AACTAATCCACTGTGGGTTGTGAAGACCAGACTCCAAACTCAGGGAATGA
GATCAAATGTGGTTCCCTACAAAAGCATACTTTCTGCTCTGAGAAGGATT
TCTCATGAAGAAGGCATGCGAGGGTTATATAGTGGCATTCTGCCTTCGTT
GGCCGGAGTTAGTCATGTTGCTATTCAGTTTCCTGCATATGAGAGAATCA
AGCATTACATGGCCAAAAAGGATGACACAGATGTTGATAAGCTAAATCCT
GGAAGTGTTATGATTGCTTCTTCAATAGCAAAAGTACTTGCCTCTGTAAT
GACTTACCCACATGAGGTTGTACGTTCAAGGCTTCAAGAGCAAGGGCAGA
ACAGAAAGGTTGATGTACAATATGCAGGCGTTGTTGATTGTGTCAAGAAG
GTATTCCAAAAGGAAGGTTTCCCTGGCTT
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