CV887189

Overview
NameCV887189
Unique NameCV887189
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length728
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CV887189 vs. ExPASy Swiss-Prot
Match: AIG1_ARATH (Protein AIG1 OS=Arabidopsis thaliana GN=AIG1 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.841e-15
Identity = 50/156 (32.05%), Postives = 96/156 (61.54%), Query Frame = -3 
Query:  259 NKTKDEAKRTEQVWKLLSLVNSVAVQNGGQPYTDDIFAELKKGATKLRDQQFEVDSLKGYSKREISELKEQMHKSYEDQLKRITEMVESKLKETTTRLEQQLAEEQAARLKAEEVAQLAQMKSNDEIRKLRENLERAQRETEELCKQAEKGGCAIL 726
            NKTKD+ K+T+QV +LL L++ V  QN   PYTD+++  +K+   + + +Q E++S KG+S+ +++ L +++    E  LK + EM+E  +K      +++L E+   R KA+E++   +M+  ++++++ E   RA+ E + L +Q     C+IL
Sbjct:  208 NKTKDDEKKTKQVHELLKLIDLVRKQNNNIPYTDEMYHMIKEENERHKKEQEELES-KGHSEEQLAALMKELQIMNERNLKAMAEMMEKNMK-IAMEAQEKLFEQ---REKAQEMSYQQKMEMQEKLKQM-EGRMRAEMEAQMLSRQQ----CSIL 353
The following BLAST results are available for this feature:
BLAST of CV887189 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
AIG1_ARATH7.841e-1532.05Protein AIG1 OS=Arabidopsis thaliana GN=AIG1 PE=2 ... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS04_2_029G05_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_029_T7_G05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV887189 ID=CV887189; Name=CV887189; organism=Citrus sinensis; type=EST; length=728bp
TTTTTTTTTTTTCCTAAAAGAAACTTCATTTGATGTCAATTCAATTTTTC
CATATAATACTATCTTAAGACCACACTCGAGATTGGACTGGGAACATTTA
CATAATAGAGGATACAAGCTTCTTGACTGTAGTAAAACACTGAGAATAAA
TGCAGTATTAACTTCAAATATTATCTGAAAAGGTAGGGGAGACAGCAAAA
ATATACTTTAGGTGATTTTCATGCCAATGGCATATAGTGCCAGCAGGTGA
TTAGGTCAAAGAATGGCACACCCTCCTTTTTCAGCTTGCTTACAAAGCTC
CTCTGTCTCCCTCTGAGCTCTTTCAAGATTCTCTCTAAGCTTACGAATTT
CGTCATTCGACTTCATTTGAGCTAATTGTGCGACCTCTTCTGCCTTTAAT
CGAGCAGCTTGCTCCTCTGCCAATTGCTGTTCGAGCCTAGTTGTTGTCTC
TTTGAGCTTAGACTCAACCATCTCAGTAATTCGTTTGAGTTGATCTTCAT
ATGATTTATGCATCTGCTCCTTCAGCTCTGAAATTTCTCGTTTTGAATAT
CCCTTGAGAGAATCAACCTCAAATTGTTGATCACGGAGTTTAGTAGCCCC
TTTCTTCAACTCAGCAAAGATATCATCCGTATATGGCTGCCCACCATTCT
GCACGGCCACAGAGTTAACCAGAGAAAGAAGCTTCCAAACCTGCTCAGTT
CTCTTGGCCTCATCCTTAGTCTTGTTAT
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