CV887161
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV887161 vs. ExPASy Swiss-Prot
Match: FBK30_ARATH (F-box/kelch-repeat protein At1g80440 OS=Arabidopsis thaliana GN=At1g80440 PE=2 SV=1) HSP 1 Score: 283.493 bits (724), Expect = 8.588e-76 Identity = 137/226 (60.62%), Postives = 172/226 (76.11%), Query Frame = 2 Query: 74 MDLIPDLPNEIALECLSRVSYKQFATISSVCKGWKSEISRPEFRRSRKDTRCSEQLLFMTQARVDQSRKSGVPKRFATPVYRITVLELGSGEWSELPPIPGFPDGLPLFCQLSAVGPELVVIGGLDLATWEASSSVFVFNIISATWRRGADMPGGRRMLFGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARDEWASLPDMSRERDECKAVFHCGKLLVIGGYST 751 M+LIP+LP+++A ECL R SY+QF I+SVC+ W E+S +F RK +R S++LL ++QARVD + G K ATP YRI+VLE GSG W+ELPPIPG GLPLFC+L +VG +L+V+GGLD TW+A SVFVF+ +++ WR GA MPG RR FGCASD DRTV VAGGH+E+K AL SAM YDV+ D+W LPDM+RERDECKAVFH G+ VIGGY+T Sbjct: 1 MELIPNLPDDVARECLLRSSYQQFPVIASVCRAWNREVSLSQFLHQRKASRHSQELLILSQARVDPA---GSGKIIATPEYRISVLESGSGLWTELPPIPGQTKGLPLFCRLVSVGSDLIVLGGLDPITWQAHDSVFVFSFLTSKWRVGATMPGVRRSFFGCASDSDRTVLVAGGHNEEKCALTSAMVYDVSEDKWTFLPDMARERDECKAVFHAGRFHVIGGYAT 223
BLAST of CV887161 vs. ExPASy Swiss-Prot
Match: FBK46_ARATH (F-box/kelch-repeat protein At2g44130 OS=Arabidopsis thaliana GN=At2g44130 PE=2 SV=2) HSP 1 Score: 144.436 bits (363), Expect = 6.226e-34 Identity = 94/262 (35.88%), Postives = 136/262 (51.91%), Query Frame = 2 Query: 47 TKKK--KFDSVMDLIPDLPNEIALECLSRVSYKQFATISSVCKGWKSEISRPEFRRSRKDTRCSEQLLFMTQA---------------RVDQ--SRKSGVPKRFATPVYRITVLELGSGEWSELPPIPGFPDG--LPLFCQLSAV--GPELVVIGGLDLATWEASSSVFVFNIISATWRRGADMPGGRRMLFGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARDEWASLPDMSRERDECK--AVFHCGKLLVIGGYSTNA 757 +KKK F +LIP LP+E+ALECL RV ++ + + SVC+ W+S +S F + R+ +E LL + Q VD+ S P+ F TP + ++V W + FP+ +PLFC+ + ++++IGG D T + + V+V WRRGA M R F CAS VYVAGGHD+ KNAL+SA YDV +DEW+S+ M+ RDEC+ AV + V+ GY T + Sbjct: 6 SKKKGGDFQQCHELIPGLPSELALECLVRVPFQFQSAMRSVCRSWRSLLSDSSFIQERRRCGKTELLLCLVQPLTPPIPASKSVDETLMVDEKKSEDESHPRVFCTPRFGLSVYNAAMSTWHRV----AFPEEEQIPLFCECVVLQDAGKILLIGGWDPETLQPTRDVYVLEFAGRKWRRGAPMKESRSF-FACASVSPTKVYVAGGHDDQKNALRSAEVYDVEKDEWSSVTPMTEGRDECQGFAVGMGLRFCVLSGYGTES 262
BLAST of CV887161 vs. ExPASy Swiss-Prot
Match: SKI20_ARATH (F-box/kelch-repeat protein SKIP20 OS=Arabidopsis thaliana GN=SKIP20 PE=1 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 1.534e-32 Identity = 94/271 (34.69%), Postives = 130/271 (47.97%), Query Frame = 2 Query: 44 GTKKKKFDSVM-DLIPDLPNEIALECLSRVSYKQFATISSVCKGWKSEISRPEFRRSRKDTRCSEQLLFMTQ-------------ARVDQSRKSGV------------PKRFATPVYRITVLELGSGEWSELPPIPGFPDGLPLFCQLSAV--GPELVVIGGLDLATWEASSSVFVFNIISAT-----WRRGADMPGGRRMLFGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARDEWASLPDMSRERDECKAVFHCGK--LLVIGGYST 751 G KKK + DLIP LP E+A+ECL RV ++ ++I SVC+ WK IS F + R +E LL + Q + Q +K P+ TP+Y ++V W + P+ +PLFC+ A+ ++++IGG D T + VFV + + +RRG M R F CAS G VYVAGGHD+ KNAL+SA YDV +DEW+ LP M+ RDEC V+ GY T Sbjct: 2 GVSKKKSGEIRGDLIPGLPEELAIECLVRVPFQFHSSIKSVCRSWKCVISSRSFIKERIGFGKAESLLCLVQPLTSPPSPAMMEGGEMSQKKKEEEEGESQMTQQLLQPRITGTPLYGLSVYNATLDTWHRV----AIPERIPLFCECVAIQDAGKVLLIGGWDPETLQPVRDVFVLDFFAGEGSGRRFRRGRPMSAARSF-FACASVGSTKVYVAGGHDDQKNALRSAEVYDVEKDEWSMLPPMTEGRDECHGFSMATDPGFCVLSGYGT 267
BLAST of CV887161 vs. ExPASy Swiss-Prot
Match: FBK28_ARATH (F-box/kelch-repeat protein At1g67480 OS=Arabidopsis thaliana GN=At1g67480 PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.628e-16 Identity = 69/225 (30.67%), Postives = 106/225 (47.11%), Query Frame = 2 Query: 80 LIPDLPNEIALECLSRVSYKQFATISSVCKGWKSEISRPEFRRSRKDTRCSEQLLFMTQARVDQSRKSGVPKRFATPVYRITVLELGSGEWSELPPIPGFPDGLPLFCQLSAVGPELVVIGGLDL--ATWEASSSVFVFNIISATWRRGADMPGGRRMLFGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARDEWASLPDMSRERDECKAVFHCGKLLVIGGYS 748 LIP LP+++A +CL+ V +F ++ SVCK W+ + EF R+ E+ L++ G R+ V++ + S LPP+PG ++ V +L+VI G + + AS+ V+ ++ +W R AD+ R F CA + + VYV GGH D +L SA YD W + + R R C A GKL V+GG S Sbjct: 39 LIPGLPDDVAKQCLALVPRARFPSMGSVCKKWRFVVQSKEFITVRRLAGMLEEWLYVLTMNA-----GGKDNRW-------EVMDCLGQKLSSLPPMPG---PAKTGFKVVVVDGKLLVIAGCCMINGSLVASADVYQYDTCLNSWSRLADLEVA-RYDFACA-EVNGHVYVVGGHGVDGESLSSAEVYDPETCTWTFIESLRRPRWGCFASAFNGKLYVMGGRS 246
BLAST of CV887161 vs. ExPASy Swiss-Prot
Match: SKI11_ARATH (F-box/kelch-repeat protein SKIP11 OS=Arabidopsis thaliana GN=SKIP11 PE=1 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 5.480e-14 Identity = 58/221 (26.24%), Postives = 102/221 (46.15%), Query Frame = 2 Query: 80 LIPDLPNEIALECLSRVSYKQFATISSVCKGWKSEISRPEFRRSRKDTRCSEQLLFMTQARVDQSRKSGVPKRFATPVYRITVLELGSGEWSELPPIPGFPDGLPLFCQLSAVGPELVVIGGLDLATWEASSSVFVFNIISATWRRGADMPGGRRMLFGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARDEWASLPDMSRERDECKAVFHCGKLLVIGG 742 LI ++ + +++CL R S + +I+S+ + ++S + E R R+ E ++ + ++ V +R W +LP +P + + AVG +L+V+G D + S ++ +++++ +W G M R LFG AS G+ ++ AGG D L A Y+ W +LP M++ R C VF GK VIGG Sbjct: 117 LINEIGRDNSIDCLIRCSRSDYGSIASLNRNFRSLVKSGEIYRLRRQNGFVEHWVYFSCQLLEWVAFDPVERR-----------------WMQLPTMPSSVTFMCADKESLAVGTDLLVLGKDDFS----SHVIYRYSLLTNSWSSGMKM-NSPRCLFGSASLGEIAIF-AGGCDSQGKILDFAEMYNSELQTWITLPRMNKPRKMCSGVFMDGKFYVIGG 314
BLAST of CV887161 vs. ExPASy Swiss-Prot
Match: FBK15_ARATH (F-box/kelch-repeat protein At1g26930 OS=Arabidopsis thaliana GN=At1g26930 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.639e-13 Identity = 66/224 (29.46%), Postives = 99/224 (44.20%), Query Frame = 2 Query: 80 LIPDLPNEIALECLSRVSYKQFATISSVCKGWKSEISRPEFRRSRKDTRCSEQLLFMTQARVDQSRKSGVPKRFATPVYRITVLELGSGEWSELPPIPGFPDGLPLFCQLSAVGPELVVIGGLDLATWEASSSV-FVFNIISATW--RRGADMPGGRRMLFGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARDEWASLPDMSRERDECKAVFHCGKLLVIGG 742 LIP + + +L CL R S + +I+SV + +S I E R R+ E ++ F+ + + S W LP +P + AVG +L+V G WE SS V + +++++ +W + +MP R LFG AS G+ V +AGG D L +A Y+ W LP M++ R C VF GK VIGG Sbjct: 71 LIPGMNRDDSLSCLIRCSRADYCSIASVNRSLRSLIRSGEIYRLRRLQGTLEHWVY-----------------FSCHLNEWEAFDPRSKRWMHLPSMPQNECFRYADKESLAVGTDLLVFG------WEVSSYVIYRYSLLTNSWSTAKSMNMP---RCLFGSASYGEIAV-LAGGCDSSGRILDTAELYNYEDQTWLVLPGMNKRRKMCSGVFMDGKFYVIGG 267
BLAST of CV887161 vs. ExPASy Swiss-Prot
Match: FBK22_ARATH (F-box/kelch-repeat protein At1g55270 OS=Arabidopsis thaliana GN=At1g55270 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.927e-12 Identity = 58/217 (26.73%), Postives = 100/217 (46.08%), Query Frame = 2 Query: 38 KRGTKKKKFDSVMDLIPDLPNEIALECLSRVSYKQFATISSVCKGWKSEISRPEFRRSRKDTRCSEQLLFMTQARVDQSRKSGVPKRFATPVYRITVLELGSGEWSELPPIP-GFPDGLPLFCQLSAVGPELVVIGGLDLATWEASSSVFVFNIISATWRRGADMPGGRRMLFGCASDGDRTVYVAGGHDED-KNALKSAMAYDVARDEWASLPDMS 682 ++ +K+++ L+P LP+++A+ CL RV + + VCK W S F RK SE+ +++ + + R + P+ ++ W LPP+P + + + C + + G L + GG D +F +N + W R DM +R FGC + +YVAGG E + L+SA YD ++ W+ + DMS Sbjct: 64 RKNSKRERTRIQPPLLPGLPDDLAVACLIRVPRAEHRKLRLVCKRWYRLASGNFFYSQRKLLGMSEEWVYVFK----RDRDGKISWNTFDPISQL---------WQPLPPVPREYSEAVGFGCAVLS-GCHLYLFGGKDPLRGSMRRVIF-YNARTNKWHRAPDML-RKRHFFGCCVI-NNCLYVAGGECEGIQRTLRSAEVYDPNKNRWSFIADMS 263
BLAST of CV887161 vs. ExPASy Swiss-Prot
Match: FBK85_ARATH (F-box/kelch-repeat protein At4g19870 OS=Arabidopsis thaliana GN=At4g19870 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.324e-11 Identity = 61/213 (28.64%), Postives = 95/213 (44.60%), Query Frame = 2 Query: 83 IPDLPNEIALECLSRVSYKQFATISSVCKGWKSEISRPEFRRSRKDTRCSEQLLFMTQARVDQSRKSGVPKRF---ATPVYRITVLELGSGEWSE----LPPIPGFPDGLPLFCQLSAVGPELVVIGGLDLATWEASSSVFVFNIISATWRRGADMPGGRRMLFGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARDEWASLPDMSRERDEC 700 + LP+EI CL+R+S + T+S V K ++S IS E +R R +E+ +++ + + PK F P +++E + L PIP + P+ AVG E+ VIGG SS+V + + S TWR M R+ F C DG +YV GG+++ + A +D+ W L D E C Sbjct: 30 LSSLPDEIVENCLARISRSYYPTLSIVSKSFRSIISSTELYVARSHLRNTEECVYVCLS----DKSFEFPKWFTLWVNPNQANSMVEKKRKKKKTIGKLLVPIPS-SNLSPVSKSAIAVGSEIYVIGG--KVDGALSSAVRILDCRSNTWRDAPSMTVARKRPFICLYDG--KIYVIGGYNKLSESEPWAEVFDIKTQTWECLSDPGTEIRNC 233
BLAST of CV887161 vs. ExPASy Swiss-Prot
Match: SKI30_ARATH (F-box/kelch-repeat protein SKIP30 OS=Arabidopsis thaliana GN=SKIP30 PE=1 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 9.673e-11 Identity = 57/233 (24.46%), Postives = 91/233 (39.06%), Query Frame = 2 Query: 65 DSVMDLIPDLPNEIALECLSRVSYKQFATISSVCKGWKSEISRPEFRRSRKDTRCSEQLLFMTQARVDQSRKSGVPKRFATPVYRITVLELGSGEWSELPPIPGFPDGLPLFCQLSAVGPELVVIGGLDLAT--------WEASSSVFVFNIISATWRRGADMPGGRRMLFGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARDEWASLPDMSRERDE-CKAVFHCGKLLVI 736 +++ L+ +P +AL CL+ V + V + W++ I E R RK+ R SE LL + P V W LP +P L F ++ G V+ GG D + A+ V+ ++ + W A M R M C G + VAGG + ++ A YD D W S+PD+ + + C + GK+ V+ Sbjct: 6 ETMSGLLDGIPEAVALRCLAHVPLHLHPNLELVSRSWRAAIRSHELFRVRKELRSSEHLLCVCA---------------FDPENIWQVYSPNCDRWLTLPLLPSRIRHLAHFGAVTTAGMLFVLGGGSDAVSPVTGDHDGTFATDQVWSYDFVQRQWTPRASMLVPRAMFACCVLQG--KIVVAGGFTTCRKSISGAEMYDPENDVWTSIPDLHQTHNSACSGLVVNGKVHVL 221 The following BLAST results are available for this feature:
BLAST of CV887161 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CV887161 ID=CV887161; Name=CV887161; organism=Citrus sinensis; type=EST; length=757bpback to top |