CV887150
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV887150 vs. ExPASy Swiss-Prot
Match: PATL3_ARATH (Patellin-3 OS=Arabidopsis thaliana GN=PATL3 PE=1 SV=2) HSP 1 Score: 291.197 bits (744), Expect = 4.844e-78 Identity = 133/175 (76.00%), Postives = 153/175 (87.43%), Query Frame = -3 Query: 311 KQVFINVPWWYLAFHTMISPFMTQRTKSKFVFAGPSKSTETLFKYISPEHVPIQYGGLSVDYCDCNPEFTIDDPATEITVKPATKQNVEIIIYEKCTVVWEIRVVGWEVSYGAEFVPEAKDKYTIIIQKPTKLSPTDEPVVCQRFKVDELGKILLTVDNPTSKKKKLLYRFKVEP 835 KQ FINVPWWYL F+T+I PFMT R+KSK VFAGPS+S ETLFKYISPE VP+QYGGLSVD CDCNP+F+++D A+EITVKP TKQ VEIIIYEKC +VWEIRV GWEVSY AEFVPE KD YT++IQKP K+ P+DEPV+ FKV+ELGK+LLTVDNPTSKKKKL+YRF V+P Sbjct: 315 KQAFINVPWWYLVFYTVIGPFMTPRSKSKLVFAGPSRSAETLFKYISPEQVPVQYGGLSVDPCDCNPDFSLEDSASEITVKPGTKQTVEIIIYEKCELVWEIRVTGWEVSYKAEFVPEEKDAYTVVIQKPRKMRPSDEPVLTHSFKVNELGKVLLTVDNPTSKKKKLVYRFNVKP 489
BLAST of CV887150 vs. ExPASy Swiss-Prot
Match: PATL5_ARATH (Patellin-5 OS=Arabidopsis thaliana GN=PATL5 PE=1 SV=2) HSP 1 Score: 285.419 bits (729), Expect = 2.658e-76 Identity = 135/179 (75.42%), Postives = 155/179 (86.59%), Query Frame = -3 Query: 299 KQVFINVPWWYLAFHTMISPFMTQRTKSKFVFAGPSKSTETLFKYISPEHVPIQYGGLSVDYCDCNPEFTIDDPATEITVKPATKQNVEIIIYEKCTVVWEIRVVGWEVSYGAEFVPEAKDKYTIIIQKPTKLSPTDEPVVCQRFKVDELGKILLTVDNPTSKKKKLLYRFKVEPF*AC 835 KQ+FINVPWWYLAF+ +ISPFM+QR+KSK VFAGPS+S ETL KYISPEHVP+QYGGLSVD C+CN +FT DD ATEITVKP TKQ VEII+YEKCT+VWEIRVVGWEVSYGAEFVPE K+ YT+IIQKP K++ +E VV FKV E+G+ILLTVDNPTS KK L+YRFKV+P AC Sbjct: 490 KQIFINVPWWYLAFYRIISPFMSQRSKSKLVFAGPSRSAETLLKYISPEHVPVQYGGLSVDNCECNSDFTHDDIATEITVKPTTKQTVEIIVYEKCTIVWEIRVVGWEVSYGAEFVPENKEGYTVIIQKPRKMTAKNELVVSHSFKVGEVGRILLTVDNPTSTKKMLIYRFKVKPL-AC 667
BLAST of CV887150 vs. ExPASy Swiss-Prot
Match: PATL1_ARATH (Patellin-1 OS=Arabidopsis thaliana GN=PATL1 PE=1 SV=2) HSP 1 Score: 185.267 bits (469), Expect = 3.744e-46 Identity = 89/175 (50.86%), Postives = 120/175 (68.57%), Query Frame = -3 Query: 314 KQVFINVPWWYLAFHTMISPFMTQ-RTKSKFVFAGPSKSTETLFKYISPEHVPIQYGGLSVDYCDCNPEFTIDDPATEITVKPATKQNVEIIIYEKCTVVWEIRVVGWEVSYGAEFVPEAKDKYTIIIQKPTKLSPTDEPVVCQRFKVDELGKILLTVDNPTSKKKKLLYRFKVE 835 K++FINVPWWY+ ++ +T RT+SK V AGPSKS +T+FKYI+PE VP++YGGLS D P ++ TE VKPA +E+ E CT+ WE+RV+G +VSYGA+F P + Y +I+ K K+ TDEPV+ FKV E GKI++T+DN TSKKKK+LYRFK + Sbjct: 405 KELFINVPWWYIPYYKTFGSIITSPRTRSKMVLAGPSKSADTIFKYIAPEQVPVKYGGLSKD----TP--LTEETITEAIVKPAANYTIELPASEACTLSWELRVLGADVSYGAQFEPTTEGSYAVIVSKTRKIGSTDEPVITDSFKVGEPGKIVITIDNQTSKKKKVLYRFKTQ 573
BLAST of CV887150 vs. ExPASy Swiss-Prot
Match: PATL2_ARATH (Patellin-2 OS=Arabidopsis thaliana GN=PATL2 PE=1 SV=2) HSP 1 Score: 178.718 bits (452), Expect = 3.504e-44 Identity = 84/175 (48.00%), Postives = 119/175 (68.00%), Query Frame = -3 Query: 314 KQVFINVPWWYLAFHTMISPFMTQ-RTKSKFVFAGPSKSTETLFKYISPEHVPIQYGGLSVDYCDCNPEFTIDDPATEITVKPATKQNVEIIIYEKCTVVWEIRVVGWEVSYGAEFVPEAKDKYTIIIQKPTKLSPTDEPVVCQRFKVDELGKILLTVDNPTSKKKKLLYRFKVE 835 K++FINVPWWY+ ++ +T RT+SK V +GPSKS ET+FKY++PE VP++YGGLS D FT++D TE VK +K +++ E T+ WE+RV+G +VSYGA+F P + YT+I+ K K+ TDEPV+ FK E GK+++T+DN T KKKK+LYR K + Sbjct: 513 KELFINVPWWYIPYYKTFGSIITSPRTRSKMVLSGPSKSAETIFKYVAPEVVPVKYGGLSKD-----SPFTVEDGVTEAVVKSTSKYTIDLPATEGSTLSWELRVLGADVSYGAQFEPSNEASYTVIVSKNRKVGLTDEPVITDSFKASEAGKVVITIDNQTFKKKKVLYRSKTQ 682
BLAST of CV887150 vs. ExPASy Swiss-Prot
Match: PATL4_ARATH (Patellin-4 OS=Arabidopsis thaliana GN=PATL4 PE=1 SV=2) HSP 1 Score: 160.229 bits (404), Expect = 1.290e-38 Identity = 82/176 (46.59%), Postives = 121/176 (68.75%), Query Frame = -3 Query: 314 KQVFINVPWWYLAFHTMISPFMTQRTKSKFVFAGPSKSTETLFKYISPEHVPIQYGGL-SVDYCDCNPEFTIDDPATEITVKPATKQNVEIIIYE-KCTVVWEIRVVGWEVSYGAEFVPEAKDKYTIIIQKPTKLSPTDEPVVCQRFKVDELGKILLTVDNPTSKKKKLLYRFKVE 835 + +FINVP+W+ A ++SPF+TQRTKSKFV A P+K ETL KYI + +P+QYGG +VD + EF+ ++ +E+ VKP + + +EI E + T+VW+I V+GWEV+Y EFVP + YT+I+QK K+ + P + FK + GKI+LTVDN + KKKK+LYR++ + Sbjct: 366 RNIFINVPFWFYAMRAVLSPFLTQRTKSKFVVARPAKVRETLLKYIPADELPVQYGGFKTVD----DTEFS-NETVSEVVVKPGSSETIEIPAPETEGTLVWDIAVLGWEVNYKEEFVPTEEGAYTVIVQKVKKMGANEGP-IRNSFKNSQAGKIVLTVDNVSGKKKKVLYRYRTK 535
BLAST of CV887150 vs. ExPASy Swiss-Prot
Match: PATL6_ARATH (Patellin-6 OS=Arabidopsis thaliana GN=PATL6 PE=2 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 2.873e-38 Identity = 81/176 (46.02%), Postives = 117/176 (66.48%), Query Frame = -3 Query: 317 QVFINVPWWYLAFHTMISPFMTQRTKSKFVFAGPSKSTETLFKYISPEHVPIQYGGLS--VDYCDCNPEFTIDDPATEITVKPATKQNVEII-IYEKCTVVWEIRVVGWEVSYGAEFVPEAKDKYTIIIQKPTKLSPTDEPVVCQRFKVDELGKILLTVDNPTSKKKKL-LYRFKV 832 ++FINVPW++ ++M SPF+TQRTKSKFV + + ETL+K+I PE +P+QYGGLS D + P+ PA+E ++K K N++I I T+ W+I V GW++ Y AEFVP A++ Y I+++KP K+ TDE VC F E GK++L+VDN S+KKK+ YR+ V Sbjct: 233 KIFINVPWYFSVIYSMFSPFLTQRTKSKFVMSKEGNAAETLYKFIRPEDIPVQYGGLSRPTDSQNGPPK-----PASEFSIKGGEKVNIQIEGIEGGATITWDIVVGGWDLEYSAEFVPNAEESYAIVVEKPKKMKATDE-AVCNSFTTVEAGKLILSVDNTLSRKKKVAAYRYTV 402 The following BLAST results are available for this feature:
BLAST of CV887150 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CV887150 ID=CV887150; Name=CV887150; organism=Citrus sinensis; type=EST; length=837bpback to top |