CV887149

Overview
NameCV887149
Unique NameCV887149
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length761
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV887149 vs. ExPASy Swiss-Prot
Match: PATL5_ARATH (Patellin-5 OS=Arabidopsis thaliana GN=PATL5 PE=1 SV=2)

HSP 1 Score: 310.842 bits (795), Expect = 5.059e-84
Identity = 146/185 (78.92%), Postives = 165/185 (89.19%), Query Frame = 1
Query:  205 SIWGVPLLKDDRTDVILLKFLRARDFKVRDAFVMIKNTIQWRKDFGIEALLNEDLGDDLEKVVFMHGFDRDGHPVCYNVYGEFQNKQLYAKTFSDEEKRMKFLRWRIQFLERSIRKLNFRPGGVSTIFQVNDLKNSPGPGKRELRIATKQALQLLQDNYPEFVAKQVFINVPWWYLAFHTMISPF 759
            SIWGVPLLKDDRTDV+LLKFLRARDFK ++A+ M+  T+QWR DF IE LL+E+LGDDL+KVVFM G D++ HPVCYNVYGEFQNK LY KTFSDEEKR +FLRWRIQFLE+SIR L+F  GGVSTI QVNDLKNSPGPGK ELR+ATKQAL LLQDNYPEFV+KQ+FINVPWWYLAF+ +ISPF
Sbjct:  326 SIWGVPLLKDDRTDVVLLKFLRARDFKPQEAYSMLNKTLQWRIDFNIEELLDENLGDDLDKVVFMQGQDKENHPVCYNVYGEFQNKDLYQKTFSDEEKRERFLRWRIQFLEKSIRNLDFVAGGVSTICQVNDLKNSPGPGKTELRLATKQALHLLQDNYPEFVSKQIFINVPWWYLAFYRIISPF 510          
BLAST of CV887149 vs. ExPASy Swiss-Prot
Match: PATL3_ARATH (Patellin-3 OS=Arabidopsis thaliana GN=PATL3 PE=1 SV=2)

HSP 1 Score: 309.686 bits (792), Expect = 1.127e-83
Identity = 144/184 (78.26%), Postives = 166/184 (90.22%), Query Frame = 1
Query:  208 IWGVPLLKDDRTDVILLKFLRARDFKVRDAFVMIKNTIQWRKDFGIEALLNEDLGDDLEKVVFMHGFDRDGHPVCYNVYGEFQNKQLYAKTFSDEEKRMKFLRWRIQFLERSIRKLNFRPGGVSTIFQVNDLKNSPGPGKRELRIATKQALQLLQDNYPEFVAKQVFINVPWWYLAFHTMISPF 759
            IWG+PLL+DDR+DV+LLKFLRAR+FKV+D+F M+KNTI+WRK+F I+ L+ EDL DDL+KVVFMHG DR+GHPVCYNVYGEFQNK+LY KTFSDEEKR  FLR RIQFLERSIRKL+F  GGVSTIFQVND+KNSPG GK+ELR ATKQA++LLQDNYPEFV KQ FINVPWWYL F+T+I PF
Sbjct:  152 IWGIPLLEDDRSDVVLLKFLRAREFKVKDSFAMLKNTIKWRKEFKIDELVEEDLVDDLDKVVFMHGHDREGHPVCYNVYGEFQNKELYNKTFSDEEKRKHFLRTRIQFLERSIRKLDFSSGGVSTIFQVNDMKNSPGLGKKELRSATKQAVELLQDNYPEFVFKQAFINVPWWYLVFYTVIGPF 335          
BLAST of CV887149 vs. ExPASy Swiss-Prot
Match: PATL6_ARATH (Patellin-6 OS=Arabidopsis thaliana GN=PATL6 PE=2 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 9.608e-59
Identity = 109/188 (57.98%), Postives = 142/188 (75.53%), Query Frame = 1
Query:  205 SIWGVPLLK-DDRTDVILLKFLRARDFKVRDAFVMIKNTIQWRKDFGIEALLNEDLG-DDLE-KVVFMHGFDRDGHPVCYNVYGEFQNKQLYAKTFSDEEKRMKFLRWRIQFLERSIRKLNFRPGGVSTIFQVNDLKNSPGPGKRELRIATKQALQLLQDNYPEFVAKQVFINVPWWYLAFHTMISPF 759
            S+WGV LL  DD+ DVILLKFLRARDFKV D+  M++  ++WR++F  E L  EDLG  DLE KV +M G+D++GHPVCYN YG F+ K++Y + F DEEK  KFLRWR+Q LER ++ L+F+PGGV++I QV DLK+ P   KRELR+A+ Q L L QDNYPE VA ++FINVPW++   ++M SPF
Sbjct:   68 SMWGVSLLGGDDKADVILLKFLRARDFKVADSLRMLEKCLEWREEFKAEKLTEEDLGFKDLEGKVAYMRGYDKEGHPVCYNAYGVFKEKEMYERVFGDEEKLNKFLRWRVQVLERGVKMLHFKPGGVNSIIQVTDLKDMP---KRELRVASNQILSLFQDNYPELVATKIFINVPWYFSVIYSMFSPF 252          
BLAST of CV887149 vs. ExPASy Swiss-Prot
Match: PATL2_ARATH (Patellin-2 OS=Arabidopsis thaliana GN=PATL2 PE=1 SV=2)

HSP 1 Score: 222.631 bits (566), Expect = 1.812e-57
Identity = 104/180 (57.78%), Postives = 141/180 (78.33%), Query Frame = 1
Query:  205 SIWGVPLLKDDRTDVILLKFLRARDFKVRDAFVMIKNTIQWRKDFGIEALLNEDL-GDDLEKVVFMHGFDRDGHPVCYNVYGEFQNKQLYAKTFSDEEKRMKFLRWRIQFLERSIRKLNFRPGGVSTIFQVNDLKNSPGPGKRELRIATKQALQLLQDNYPEFVAKQVFINVPWWYLAFH 741
            SIWG+PLL+D+R+DVILLKFLRARDFKV++AF M+KNT+QWRK+  I+ L++EDL G + EK+VF HG D+ GH V Y+ YGEFQNK++    FSD+EK  KFL+WRIQF E+ +R L+F P   S+   V+D +N+PG G+R L    K+A++  +DNYPEFVAK++FINVPWWY+ ++
Sbjct:  352 SIWGIPLLEDERSDVILLKFLRARDFKVKEAFTMLKNTVQWRKENKIDDLVSEDLEGSEFEKLVFTHGVDKQGHVVIYSSYGEFQNKEI----FSDKEKLSKFLKWRIQFQEKCVRSLDFSPEAKSSFVFVSDFRNAPGLGQRALWQFIKRAVKQFEDNYPEFVAKELFINVPWWYIPYY 527          
BLAST of CV887149 vs. ExPASy Swiss-Prot
Match: PATL4_ARATH (Patellin-4 OS=Arabidopsis thaliana GN=PATL4 PE=1 SV=2)

HSP 1 Score: 213.001 bits (541), Expect = 1.436e-54
Identity = 97/187 (51.87%), Postives = 138/187 (73.80%), Query Frame = 1
Query:  208 IWGVPLLKD---DRTDVILLKFLRARDFKVRDAFVMIKNTIQWRKDFGIEALLNEDLGDDLEKVVFMHGFDRDGHPVCYNVYGEFQNKQLYAKTFSDEEKRMKFLRWRIQFLERSIRKLNFRPGGVSTIFQVNDLKNSPGPGKRELRIATKQALQLLQDNYPEFVAKQVFINVPWWYLAFHTMISPF 759
            +WGVPLL     + TDVILLKFLRARDFKV +AF M+K T++WRK   I+++L E+ G+DL    +M+G DR+ HPVCYNV+ E    +LY +T   E+ R KFLRWR Q +E+ I+KLN +PGGV+++ Q++DLKN+PG  + E+ +  K+ ++ LQDNYPEFV++ +FINVP+W+ A   ++SPF
Sbjct:  205 LWGVPLLPSKGAESTDVILLKFLRARDFKVNEAFEMLKKTLKWRKQNKIDSILGEEFGEDLATAAYMNGVDRESHPVCYNVHSE----ELY-QTIGSEKNREKFLRWRFQLMEKGIQKLNLKPGGVTSLLQIHDLKNAPGVSRTEIWVGIKKVIETLQDNYPEFVSRNIFINVPFWFYAMRAVLSPF 386          
BLAST of CV887149 vs. ExPASy Swiss-Prot
Match: PATL1_ARATH (Patellin-1 OS=Arabidopsis thaliana GN=PATL1 PE=1 SV=2)

HSP 1 Score: 200.29 bits (508), Expect = 9.630e-51
Identity = 97/181 (53.59%), Postives = 133/181 (73.48%), Query Frame = 1
Query:  205 SIWGVPLLKDDRTDVILLKFLRARDFKVRDAFVMIKNTIQWRKDFGIEALLNE-DLGDDLEKVVFMHGFDRDGHPVCYNVYGEFQNKQLYAKTFSDEEKRMKFLRWRIQFLERSIRKLNF-RPGGVSTIFQVNDLKNSPGPGKRELRIATKQALQLLQDNYPEFVAKQVFINVPWWYLAFH 741
            SIWGVPLL+D+R+DVIL KFLRARDFKV++A  M+KNT+QWRK+  I+ L+   +   + EK+VF HG D++GH V Y+ YGEFQNK+L    FSD+EK  KFL WRIQ  E+ +R ++F  P   S+   V+D +N+PG GKR L    ++A++  +DNYPEF AK++FINVPWWY+ ++
Sbjct:  243 SIWGVPLLQDERSDVILTKFLRARDFKVKEALTMLKNTVQWRKENKIDELVESGEEVSEFEKMVFAHGVDKEGHVVIYSSYGEFQNKEL----FSDKEKLNKFLSWRIQLQEKCVRAIDFSNPEAKSSFVFVSDFRNAPGLGKRALWQFIRRAVKQFEDNYPEFAAKELFINVPWWYIPYY 419          
BLAST of CV887149 vs. ExPASy Swiss-Prot
Match: SFH5_PICGU (Phosphatidylinositol transfer protein SFH5 OS=Pichia guilliermondii GN=SFH5 PE=3 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 1.500e-19
Identity = 63/194 (32.47%), Postives = 103/194 (53.09%), Query Frame = 1
Query:  214 GVPLLKDDRTDVILLKFLRARDFKVRDAFVMIKNTIQWRKDFG-IEALLNEDLG---DDLEKVVFMHGFDRDGHPVCYNVYGEFQNKQLYAKTFSDEEKRMK----FLRWRIQFLERSIRKLNFRPGGVSTIFQVNDLKNSP----GPGKRELRIATKQALQLLQDNYPEFVAKQVFINVP----WWYLAFHTM 747
            G+  + D+  + I+LKFL A ++K  +A   + NT +WRK F  + A  +E      DDL  +    G + + H V +N+YG  ++ +   + F  ++K  K    FLRWRI  +ER++  ++F     S I QV+D  N       PG   ++ ATK+ +++  DNYPE ++ + FINVP    W +  F T+
Sbjct:   78 GLEHVHDEIRNEIVLKFLIAEEYKFEEARTRLINTFKWRKKFQPLSAAYSETFDKELDDLGVITKYDGTNENLHVVTWNLYGNLKSPKKLFQKFGQDDKAEKEGSPFLRWRIGLMERALSLIDFTDKSNSKIAQVHDYNNVSMFRMDPG---MKAATKEIIKIFGDNYPELLSTKFFINVPTIMSWVFTFFRTI 268          
BLAST of CV887149 vs. ExPASy Swiss-Prot
Match: SFH5_YARLI (Phosphatidylinositol transfer protein SFH5 OS=Yarrowia lipolytica GN=SFH5 PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.515e-16
Identity = 55/165 (33.33%), Postives = 91/165 (55.15%), Query Frame = 1
Query:  238 RTDVILLKFLRARDFKVRDAFVMIKNTIQWRKDFGIE--ALLNEDLGDDLEKVVFMHGFDRDGHPVCYNVYGEFQNKQLYAKTFSDEEKRMKFLRWRIQFLERSIRKLNF-RPGGVSTIFQVNDLKN-SPGPGKRELRIATKQALQLLQDNYPEFVAKQVFINVP 720
            + D+ILLKFL+ARD+ +     M+ + ++WRK+F     A    D   D   V+   G   +     +N+YG   N++   + F D +    FLRWR+  +ERS+  L+F +PG  S + Q++D KN S      E + A+K+ +++ Q  YPE + ++ F+NVP
Sbjct:   57 KRDIILLKFLKARDYDIAQTKDMLTDALKWRKEFDPLDCASAKHDSKFDKLGVITDKGAGGEPQVTNWNLYGAVSNRK---EIFGDLK---GFLRWRVGIMERSLALLDFTKPGAGSMLLQIHDYKNVSFLRLDAETKAASKETIRVFQSYYPETLERKFFVNVP 215          
BLAST of CV887149 vs. ExPASy Swiss-Prot
Match: SFH5_PICST (Phosphatidylinositol transfer protein SFH5 OS=Pichia stipitis GN=SFH5 PE=3 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 2.927e-15
Identity = 59/182 (32.42%), Postives = 96/182 (52.75%), Query Frame = 1
Query:  250 ILLKFLRARDFKVRDAFVMIKNTIQWRKDFG-IEALLNEDLG---DDLEKVVFMHGFDRDG-HPVCYNVYGEFQNKQLY------AKTFSDEEKRMKFLRWRIQFLERSIRKLNFRPGGVSTIFQVNDLKN-SPGPGKRELRIATKQALQLLQDNYPEFVAKQVFINVP----WWYLAFHTM 747
            ILLKFL A ++ V  A   + +T+ WR  F  + A  +E+     +DL  +    G   D  + V +N YG    K+L+      A T +++    +FLRWRI  +E+S++ ++F     + I QV+D  N S     + +R ATK+ +++  DNYPE ++ + FINVP    W +  F T+
Sbjct:   73 ILLKFLAADEYDVELATKRLIDTLNWRNKFHPLSAAFDENFNKALNDLGAITNFVGLKSDNLNVVTWNFYGATTPKKLFEEYGDNAGTTTNQRPGSQFLRWRIGLMEKSLQLVDFTDPKNNKIAQVHDYNNVSMFKVDKGMRAATKEIIKIFGDNYPELLSTKFFINVPSLMSWVFTFFKTI 254          
BLAST of CV887149 vs. ExPASy Swiss-Prot
Match: SFH5_DEBHA (Phosphatidylinositol transfer protein SFH5 OS=Debaryomyces hansenii GN=SFH5 PE=3 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 7.209e-14
Identity = 56/179 (31.28%), Postives = 96/179 (53.63%), Query Frame = 1
Query:  250 ILLKFLRARDFKVRDAFVMIKNTIQWRKDFG-IEALLNEDLGDDLEKVVFMHGFDRDGHP----VCYNVYGEFQN-KQLYAKTFSDEEKRM------KFLRWRIQFLERSIRKLNFRPGGVSTIFQVNDLKN-SPGPGKRELRIATKQALQLLQDNYPEFVAKQVFINVP---WWYLAF 738
            ILLKFL A ++ V  A   + NT+ WR  F  + A   E+   +L+++  + G + DG+     V +N+YG+ +N K+++ +   + E ++      +FLRWRI  +E+S+   +F     + I QV+D  N S       ++ +TKQ + +   NYPE ++ + FINVP    W  +F
Sbjct:   84 ILLKFLVADEYDVETAKTRLVNTLNWRNKFQPLSAAYEEEFDQELDQLGVITG-NPDGNSNMKYVTWNLYGKLKNPKKVFQQYGGEGESKVGAKEGTQFLRWRIGIMEKSLSFADFTDPSNNKIAQVHDYNNVSMLRMDPNVKASTKQIISIFGANYPELLSVKFFINVPVFMGWVFSF 261          
The following BLAST results are available for this feature:
BLAST of CV887149 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 20
Match NameE-valueIdentityDescription
PATL5_ARATH5.059e-8478.92Patellin-5 OS=Arabidopsis thaliana GN=PATL5 PE=1 S... [more]
PATL3_ARATH1.127e-8378.26Patellin-3 OS=Arabidopsis thaliana GN=PATL3 PE=1 S... [more]
PATL6_ARATH9.608e-5957.98Patellin-6 OS=Arabidopsis thaliana GN=PATL6 PE=2 S... [more]
PATL2_ARATH1.812e-5757.78Patellin-2 OS=Arabidopsis thaliana GN=PATL2 PE=1 S... [more]
PATL4_ARATH1.436e-5451.87Patellin-4 OS=Arabidopsis thaliana GN=PATL4 PE=1 S... [more]
PATL1_ARATH9.630e-5153.59Patellin-1 OS=Arabidopsis thaliana GN=PATL1 PE=1 S... [more]
SFH5_PICGU1.500e-1932.47Phosphatidylinositol transfer protein SFH5 OS=Pich... [more]
SFH5_YARLI4.515e-1633.33Phosphatidylinositol transfer protein SFH5 OS=Yarr... [more]
SFH5_PICST2.927e-1532.42Phosphatidylinositol transfer protein SFH5 OS=Pich... [more]
SFH5_DEBHA7.209e-1431.28Phosphatidylinositol transfer protein SFH5 OS=Deba... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_029D12_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_029_T3_D12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV887149 ID=CV887149; Name=CV887149; organism=Citrus sinensis; type=EST; length=761bp
CAAGAAGCTCTCAATAATCGCCATTTCACTTCCCCTAAAGAAGAAGAGAA
AGAGAAACAACCACCACCCAGTTCAGATGCTCCAAAAACCGATGGACCCT
CTTCAGAATCTGACAAAAGCACCGAAATTAAGCCACCCCAGGAGCAGCAA
GCACCAGCTGAAGTAGCACCGCCGCCGCCGCAGCCGCCAGCAGAAGAGGA
GGTGTCCATATGGGGGGTGCCTCTGCTTAAAGATGATAGAACTGATGTGA
TTCTGTTGAAATTTCTGAGGGCAAGGGATTTCAAAGTCAGGGACGCTTTT
GTAATGATCAAGAACACAATTCAGTGGAGGAAAGATTTCGGCATTGAAGC
TCTTCTGAATGAAGATCTTGGTGATGATTTGGAGAAAGTTGTATTTATGC
ATGGGTTTGATAGGGACGGCCATCCTGTGTGTTACAATGTTTACGGAGAG
TTCCAGAATAAGCAGTTGTATGCCAAGACTTTTTCAGATGAGGAGAAGAG
GATGAAATTTCTGAGGTGGAGAATTCAGTTCTTGGAGAGGAGTATTAGGA
AGCTTAATTTTAGGCCTGGCGGAGTTTCCACTATCTTTCAGGTTAATGAT
CTTAAGAATTCACCAGGCCCTGGTAAGCGCGAGCTTAGGATTGCTACTAA
ACAGGCTCTTCAGTTGCTTCAAGATAATTATCCCGAATTCGTTGCCAAGC
AGGTGTTTATCAATGTTCCATGGTGGTATCTTGCATTCCACACGATGATT
AGTCCTTTTAT
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