CV887139

Overview
NameCV887139
Unique NameCV887139
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length836
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV887139 vs. ExPASy Swiss-Prot
Match: NAC98_ARATH (Protein CUP-SHAPED COTYLEDON 2 OS=Arabidopsis thaliana GN=NAC098 PE=1 SV=1)

HSP 1 Score: 235.728 bits (600), Expect = 2.415e-61
Identity = 130/230 (56.52%), Postives = 153/230 (66.52%), Query Frame = 1
Query:    1 LTPKVFDGCFSARAIGEVDLNKCEPWDLPRRAKMGEKEWYFFCVRDRKYPTGLRTNRATEAGYWKATGKDKEIYKAK--ALVGMKKTLVFYRGRAPKGQKTNWVMHEYRLEGKYSAYDHPKTAKNEWVICRVFQKS----------GGG---------------KKTHIQGMVKLG--SFGNGIGSSALPPLMD----------SSPYNS-ETRTTINE---TSHVTCFS 561
            L  KV DGCFS+RAI EVDLNKCEPW LP RAKMGEKEWYFF +RDRKYPTGLRTNRATEAGYWKATGKD+EI+ +K  ALVGMKKTLVFY+GRAPKG+K+NWVMHEYRLEGK+S +   +++K+EWVI RVFQK+          GGG               KKT +   +        +   S +LPPL+D          S  Y+S  T TT+     T HV+CFS
Sbjct:   35 LLRKVLDGCFSSRAIAEVDLNKCEPWQLPGRAKMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIFSSKTCALVGMKKTLVFYKGRAPKGEKSNWVMHEYRLEGKFSYHFISRSSKDEWVISRVFQKTTLASTGAVSEGGGGGGATVSVSSGTGPSKKTKVPSTISRNYQEQPSSPSSVSLPPLLDPTTTLGYTDSSCSYDSRSTNTTVTASAITEHVSCFS 264          
BLAST of CV887139 vs. ExPASy Swiss-Prot
Match: NAC54_ARATH (Protein CUP-SHAPED COTYLEDON 1 OS=Arabidopsis thaliana GN=NAC054 PE=1 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 8.321e-54
Identity = 109/195 (55.90%), Postives = 138/195 (70.77%), Query Frame = 1
Query:    1 LTPKVFDGCFSARAIGEVDLNKCEPWDLPRRAKMGEKEWYFFCVRDRKYPTGLRTNRATEAGYWKATGKDKEI--YKAKALVGMKKTLVFYRGRAPKGQKTNWVMHEYRLEGKYSAYDHPKTAKNEWVICRVFQKSG-GGKKTHI----QGMVKLGSFGNGIGSSALPPLMDSSPYNSETRTTINETSHVTCFSD 564
            L  KV D  FS  AI +VDLNK EPW+LP +AKMGEKEWYFF +RDRKYPTGLRTNRATEAGYWKATGKD+EI   K K+L+GMKKTLVFY+GRAPKG+K+ WVMHEYRL+GK+S +    +AK+EWV+C+V  KSG   ++T++          G F +    SA+ P++++             T HV+CFS+
Sbjct:   38 LLKKVLDSNFSCAAISQVDLNKSEPWELPEKAKMGEKEWYFFTLRDRKYPTGLRTNRATEAGYWKATGKDREIKSSKTKSLLGMKKTLVFYKGRAPKGEKSCWVMHEYRLDGKFSYHYISSSAKDEWVLCKVCLKSGVVSRETNLISSSSSSAVTGEFSS--AGSAIAPIINTF-----------ATEHVSCFSN 219          
BLAST of CV887139 vs. ExPASy Swiss-Prot
Match: NAC31_ARATH (Protein CUP-SHAPED COTYLEDON 3 OS=Arabidopsis thaliana GN=NAC031 PE=2 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 1.125e-50
Identity = 95/140 (67.86%), Postives = 107/140 (76.43%), Query Frame = 1
Query:    1 LTPKVFDGCFSARAIGEVDLNKCEPWDLPRRAKMGEKEWYFFCVRDRKYPTGLRTNRATEAGYWKATGKDKEIYKAKA--LVGMKKTLVFYRGRAPKGQKTNWVMHEYRLEGKYSAYDHPKTAKNEWVICRVFQKSGGGK 414
            L  K+F G  S   I EVDLN+CEPW+LP  AKMGE+EWYF+ +RDRKYPTGLRTNRAT AGYWKATGKDKE++      LVGMKKTLVFY+GRAP+G KT WVMHEYRLE  +S   H  T K EWVICRVF K+G  K
Sbjct:   40 LASKIFHGGLSGIHISEVDLNRCEPWELPEMAKMGEREWYFYSLRDRKYPTGLRTNRATTAGYWKATGKDKEVFSGGGGQLVGMKKTLVFYKGRAPRGLKTKWVMHEYRLENDHS---HRHTCKEEWVICRVFNKTGDRK 176          
BLAST of CV887139 vs. ExPASy Swiss-Prot
Match: NAC22_ARATH (NAC domain-containing protein 21/22 OS=Arabidopsis thaliana GN=NAC021 PE=1 SV=2)

HSP 1 Score: 189.504 bits (480), Expect = 1.985e-47
Identity = 96/193 (49.74%), Postives = 129/193 (66.84%), Query Frame = 1
Query:   49 EVDLNKCEPWDLPRRAKMGEKEWYFFCVRDRKYPTGLRTNRATEAGYWKATGKDKEIYKAKALVGMKKTLVFYRGRAPKGQKTNWVMHEYRLEGKYSAYDHP-KTAKNEWVICRVFQKSGGGKKTHIQGMVKLGSFGNGIGSSALPPLMD---------SSPYNSETRTTINETSHVTCFSDALEDQKAQEDM 597
            +VDLNKCEPWD+P+ A +G K+WYF+  RDRKY TGLRTNRAT  GYWKATGKD+ I +   LVGM+KTLVFY+GRAP+G+KT+WVMHE+RL+G +   +H   + K +WV+CRVF K+  G    +     +GS  +   S++LPPLMD         SS  + +    INE  HV CFS+  ++Q    ++
Sbjct:   54 QVDLNKCEPWDIPKMACVGGKDWYFYSQRDRKYATGLRTNRATATGYWKATGKDRTILRKGKLVGMRKTLVFYQGRAPRGRKTDWVMHEFRLQGSHHPPNHSLSSPKEDWVLCRVFHKNTEG----VICRDNMGSCFDETASASLPPLMDPYINFDQEPSSYLSDDHHYIINE--HVPCFSNLSQNQTLNSNL 240          
BLAST of CV887139 vs. ExPASy Swiss-Prot
Match: NAC77_ORYSJ (NAC domain-containing protein 77 OS=Oryza sativa subsp. japonica GN=NAC77 PE=2 SV=2)

HSP 1 Score: 187.193 bits (474), Expect = 9.852e-47
Identity = 93/162 (57.41%), Postives = 110/162 (67.90%), Query Frame = 1
Query:    1 LTPKVFDGCFSARAIGEVDLNKCEPWDLPRRAKMGEKEWYFFCVRDRKYPTGLRTNRATEAGYWKATGKDKEIY----------------KAKALVGMKKTLVFYRGRAPKGQKTNWVMHEYRLEGKYSAYDHPK---TAKNEWVICRVFQKSGGGKKTHIQ 429
            L  K+ +  F++  IGEVDLNKCEPWDLP +AKMGEKEWYFF  +D KYPTG+RTNRAT+ GYWKATGKD+EI+                K K LVGMKKTLVFY GRAPKG KTNWVMHE+RL      + HP      K+EWV+C+VF K  G +  + Q
Sbjct:   37 LLQKLLNPSFTSLPIGEVDLNKCEPWDLPSKAKMGEKEWYFFSHKDMKYPTGMRTNRATKEGYWKATGKDREIFRQPAAVNTSSYGGSSNKKKQLVGMKKTLVFYMGRAPKGTKTNWVMHEFRLHANLHNH-HPNLRLNPKDEWVVCKVFHKKQGDEAINNQ 197          
BLAST of CV887139 vs. ExPASy Swiss-Prot
Match: NAC72_ARATH (NAC domain-containing protein 72 OS=Arabidopsis thaliana GN=NAC072 PE=2 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 2.200e-38
Identity = 83/173 (47.98%), Postives = 108/173 (62.43%), Query Frame = 1
Query:    1 LTPKVFDGCFSARAIGEVDLNKCEPWDLPRRAKMGEKEWYFFCVRDRKYPTGLRTNRATEAGYWKATGKDKEIYKAKALVGMKKTLVFYRGRAPKGQKTNWVMHEYRLEGKYSAYDHPKTAKNEWVICRVFQKSGGGKK---THIQGMVKLGSFGNGIGSSA--LPPLMDSSP 504
            L  KV    FS + IG++DL K +PWDLP +A  GEKEWYFF  RDRKYP G R NR   +GYWKATG DK I      VG+KK LVFY G+APKG KTNW+MHEYRL     +  H  +  ++WV+CR+++K+ G ++   T +Q   +  S      SS+  L  ++DS P
Sbjct:   32 LCRKVAGYHFSLQVIGDIDLYKFDPWDLPSKALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITADGRRVGIKKALVFYAGKAPKGTKTNWIMHEYRL--IEHSRSHGSSKLDDWVLCRIYKKTSGSQRQAVTPVQACREEHSTNGSSSSSSSQLDDVLDSFP 202          
BLAST of CV887139 vs. ExPASy Swiss-Prot
Match: NAC7_ARATH (NAC domain-containing protein 7 OS=Arabidopsis thaliana GN=NAC007 PE=2 SV=2)

HSP 1 Score: 154.451 bits (389), Expect = 7.077e-37
Identity = 73/123 (59.35%), Postives = 92/123 (74.80%), Query Frame = 1
Query:   43 IGEVDLNKCEPWDLPRRAKMGEKE---WYFFCVRDRKYPTGLRTNRATEAGYWKATGKDKEIYKAKALVGMKKTLVFYRGRAPKGQKTNWVMHEYRLEGKYSAYDHPKTAKNE-WVICRVFQK 399
            I ++DL K EPWDL    K+G +E   WYFF  +D+KYPTG RTNRAT+AG+WKATG+DK IY   +L+GM+KTLVFY+GRAP GQK++W+MHEYRLE      D   T + E WV+CRVF+K
Sbjct:   39 IKDIDLYKIEPWDLQELCKIGHEEQSDWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYLRHSLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLE-----TDENGTPQEEGWVVCRVFKK 156          
BLAST of CV887139 vs. ExPASy Swiss-Prot
Match: NAC48_ORYSJ (NAC domain-containing protein 48 OS=Oryza sativa subsp. japonica GN=NAC48 PE=2 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 7.077e-37
Identity = 76/148 (51.35%), Postives = 93/148 (62.84%), Query Frame = 1
Query:   43 IGEVDLNKCEPWDLPRRAKMGEKEWYFFCVRDRKYPTGLRTNRATEAGYWKATGKDKEIYKAKALVGMKKTLVFYRGRAPKGQKTNWVMHEYRL-EGKYSAYDHPKTAKNEWVICRVFQKSGGGKKTHIQGMVKLGSFGNGIGSSALP 483
            I E+DL K +PW LPR A  GEKEWYFF  RDRKYP G R NRA  +GYWKATG DK +   K  V +KK LVFY G+APKG+KTNW+MHEYRL +   SA        ++WV+CR++ K GG +K     +   G   +G G    P
Sbjct:   41 IAEIDLYKFDPWQLPRMALYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPVGSPKP-VAIKKALVFYAGKAPKGEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNKKGGLEKPPAAAVAAAGMVSSGGGVQRKP 187          
BLAST of CV887139 vs. ExPASy Swiss-Prot
Match: NAC76_ORYSJ (NAC domain-containing protein 76 OS=Oryza sativa subsp. japonica GN=NAC76 PE=2 SV=2)

HSP 1 Score: 152.525 bits (384), Expect = 2.689e-36
Identity = 75/137 (54.74%), Postives = 94/137 (68.61%), Query Frame = 1
Query:    1 LTPKVFDGCFSARAIGEVDLNKCEPWDLPRRAKMG---EKEWYFFCVRDRKYPTGLRTNRATEAGYWKATGKDKEIYKAKAL-VGMKKTLVFYRGRAPKGQKTNWVMHEYRLEGKYSAYDHPKTAKNEWVICRVFQK 399
            L  KV         I E+DLNK EPWDL  R ++G   + EWYFF  +D+KYPTG RTNRAT AG+WKATG+DK I+ A A  +GM+KTLVFY GRAP G+KT+W+MHEYRL+      D+    ++ WV+CRVF K
Sbjct:   28 LRKKVAYEAIDLDVIREIDLNKLEPWDLKDRCRIGTGPQNEWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKAIFLANACRIGMRKTLVFYVGRAPHGKKTDWIMHEYRLD-----QDNVDVQEDGWVVCRVFMK 159          
BLAST of CV887139 vs. ExPASy Swiss-Prot
Match: NAC29_ARATH (NAC domain-containing protein 29 OS=Arabidopsis thaliana GN=NAC029 PE=2 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 3.512e-36
Identity = 76/172 (44.19%), Postives = 98/172 (56.98%), Query Frame = 1
Query:   43 IGEVDLNKCEPWDLPRRAKMGEKEWYFFCVRDRKYPTGLRTNRATEAGYWKATGKDKEIYKAKALVGMKKTLVFYRGRAPKGQKTNWVMHEYRLEG--KYSAYDHPKTAKNEWVICRVFQKSGGGKKTHIQGMVKLGSFGNGIGSSALPPLMDSSPYNSETRTTINETSHVT 552
            I EVD+ K +PW LP + + GE EWYFF  R+RKYP G+R NRA  +GYWKATG DK I+   + VG+KK LVFY+GR PKG KT+W+MHEYRL    K S   +     +EWV+CR+++K G  K  + Q                    MD      ET+  +NE    T
Sbjct:   41 IPEVDIYKFDPWQLPEKTEFGENEWYFFSPRERKYPNGVRPNRAAVSGYWKATGTDKAIHSGSSNVGVKKALVFYKGRPPKGIKTDWIMHEYRLHDSRKASTKRNGSMRLDEWVLCRIYKKRGASKLLNEQ-----------------EGFMDEVLMEDETKVVVNEAERRT 195          
The following BLAST results are available for this feature:
BLAST of CV887139 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
NAC98_ARATH2.415e-6156.52Protein CUP-SHAPED COTYLEDON 2 OS=Arabidopsis thal... [more]
NAC54_ARATH8.321e-5455.90Protein CUP-SHAPED COTYLEDON 1 OS=Arabidopsis thal... [more]
NAC31_ARATH1.125e-5067.86Protein CUP-SHAPED COTYLEDON 3 OS=Arabidopsis thal... [more]
NAC22_ARATH1.985e-4749.74NAC domain-containing protein 21/22 OS=Arabidopsis... [more]
NAC77_ORYSJ9.852e-4757.41NAC domain-containing protein 77 OS=Oryza sativa s... [more]
NAC72_ARATH2.200e-3847.98NAC domain-containing protein 72 OS=Arabidopsis th... [more]
NAC7_ARATH7.077e-3759.35NAC domain-containing protein 7 OS=Arabidopsis tha... [more]
NAC48_ORYSJ7.077e-3751.35NAC domain-containing protein 48 OS=Oryza sativa s... [more]
NAC76_ORYSJ2.689e-3654.74NAC domain-containing protein 76 OS=Oryza sativa s... [more]
NAC29_ARATH3.512e-3644.19NAC domain-containing protein 29 OS=Arabidopsis th... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_029D05_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_029_T3_D05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV887139 ID=CV887139; Name=CV887139; organism=Citrus sinensis; type=EST; length=836bp
CTTACACCAAAGGTTTTTGATGGTTGTTTTTCAGCTAGAGCTATCGGTGA
AGTTGATTTGAACAAGTGTGAGCCCTGGGATTTGCCTCGGAGAGCTAAAA
TGGGTGAAAAGGAATGGTATTTTTTTTGTGTTAGGGACAGAAAGTACCCA
ACTGGATTGAGAACAAATAGAGCTACTGAAGCAGGTTACTGGAAAGCCAC
AGGCAAAGATAAGGAGATTTACAAAGCAAAAGCACTTGTGGGGATGAAGA
AAACTTTGGTTTTTTACAGAGGAAGAGCCCCGAAAGGTCAAAAAACCAAC
TGGGTCATGCATGAATATCGTTTAGAAGGCAAATATTCTGCCTACGACCA
CCCCAAAACAGCCAAAAATGAGTGGGTGATTTGTAGGGTGTTTCAAAAGA
GTGGTGGAGGAAAGAAAACACATATTCAAGGGATGGTGAAATTAGGCTCA
TTCGGGAACGGCATCGGCTCTTCTGCGTTGCCTCCATTGATGGATTCATC
TCCTTACAATAGTGAAACGAGAACCACCATTAATGAAACCTCTCACGTGA
CCTGCTTCTCCGATGCCCTGGAGGACCAGAAAGCTCAGGAAGACATGATC
GATAGCTTTAACAACTCTCTTTTAGCTTCTTCATCTTCCTCAAACCCTCA
CTCCGAAATCTCCCCTGCCTCAATTTTCTTTTCCAAATCCTCTTTTTCAA
ACTCACTCTACGCCGATCAAATCCTCCCACGTATTGCAAATATGCAATAC
CCAGATTCTTTTTTGATGCAAGACCAATCCATTTTGAAGATGTTGCTGGA
GAATCATGGACCCAGCACGAAGAAAAATTCAAAAGC
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