CV887134

Overview
NameCV887134
Unique NameCV887134
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length862
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV887134 vs. ExPASy Swiss-Prot
Match: SY132_ARATH (Syntaxin-132 OS=Arabidopsis thaliana GN=SYP132 PE=1 SV=1)

HSP 1 Score: 285.804 bits (730), Expect = 2.126e-76
Identity = 150/202 (74.26%), Postives = 162/202 (80.20%), Query Frame = -2
Query:  256 RENLTSRQKPGCGKGTGVDRSRTATTLGLKKKFKDKMGEFQVLRENIHQXXXXXXXXXXXXXTGKRADEETIDQLIETGDSEQIFQKAIQEQGRGQIMDTLAEIQERHDAVRDLERKLLELQQIFLDMAVLVDAQGDMLDNIESQVSSAVDHVQSGNTALQKAKKLQKNSRKWMCXXXXXXXXXXXXXXXXXIKPWSSNKGA 861
            RENL +RQKPGC KG+GVDRSRTATTL LKKK KDKM EFQVLRENI Q             TG+RADE+TID+LIETG+SEQIFQKAIQEQGRGQ+MDTLAEIQERHDAVRDLE+KLL+LQQIFLDMAVLVDAQG+MLDNIESQVSSAVDHVQSGNTALQ+AK LQKNSRKWMC                 +KPW  NK A
Sbjct:  104 RENLANRQKPGCAKGSGVDRSRTATTLSLKKKLKDKMAEFQVLRENIQQEYRDVVDRRVYTVTGERADEDTIDELIETGNSEQIFQKAIQEQGRGQVMDTLAEIQERHDAVRDLEKKLLDLQQIFLDMAVLVDAQGEMLDNIESQVSSAVDHVQSGNTALQRAKSLQKNSRKWMCIAIIILLIVVAVIVVGVLKPW-KNKSA 304          
BLAST of CV887134 vs. ExPASy Swiss-Prot
Match: SY131_ARATH (Putative syntaxin-131 OS=Arabidopsis thaliana GN=SYP131 PE=2 SV=1)

HSP 1 Score: 271.166 bits (692), Expect = 5.419e-72
Identity = 139/202 (68.81%), Postives = 156/202 (77.23%), Query Frame = -2
Query:  256 RENLTSRQKPGCGKGTGVDRSRTATTLGLKKKFKDKMGEFQVLRENIHQXXXXXXXXXXXXXTGKRADEETIDQLIETGDSEQIFQKAIQEQGRGQIMDTLAEIQERHDAVRDLERKLLELQQIFLDMAVLVDAQGDMLDNIESQVSSAVDHVQSGNTALQKAKKLQKNSRKWMCXXXXXXXXXXXXXXXXXIKPWSSNKGA 861
            RENL +R KPGCGKGTGVDR+RTATT+ +KKKFKDK+ EFQ LR+NI Q             TG+RADEE ID+LIETGDSEQIFQKAI+EQGRGQIMDTLAEIQERHDAVRDLE+KLL+LQQ+FLDMAVLVDAQG+MLDNIE+ VSSAVDHVQSGN  L KA K QK+SRKWMC                 +KPW+   GA
Sbjct:  105 RENLENRTKPGCGKGTGVDRTRTATTIAVKKKFKDKISEFQTLRQNIQQEYREVVERRVFTVTGQRADEEAIDRLIETGDSEQIFQKAIREQGRGQIMDTLAEIQERHDAVRDLEKKLLDLQQVFLDMAVLVDAQGEMLDNIENMVSSAVDHVQSGNNQLTKAVKSQKSSRKWMCIAILILLIIIIITVISVLKPWTQKNGA 306          
BLAST of CV887134 vs. ExPASy Swiss-Prot
Match: SY125_ARATH (Syntaxin-125 OS=Arabidopsis thaliana GN=SYP125 PE=2 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 2.994e-46
Identity = 93/175 (53.14%), Postives = 120/175 (68.57%), Query Frame = -2
Query:  337 RENLTSRQKPGCGKGTGVDRSRTATTLGLKKKFKDKMGEFQVLRENIHQXXXXXXXXXXXXXTGKRADEETIDQLIETGDSEQIFQKAIQEQGRGQIMDTLAEIQERHDAVRDLERKLLELQQIFLDMAVLVDAQGDMLDNIESQVSSAVDHVQSGNTALQKAKKLQKNSRKWMC 861
            + N  SR  PGCG G+  DR+R++   GL KK KD M  FQ LR  ++              TG++ADE+TID LI +G+SE   QKAIQEQGRGQI+DT++EIQERHDAV+++E+ LLEL Q+FLDMA LV+AQG  L+NIES V+ A   V+ G   LQ A++ QK+SRKW C
Sbjct:   98 KANANSRNVPGCGPGSSTDRTRSSVVSGLGKKLKDLMDSFQGLRARMNNEYKETVERRYFTITGEKADEQTIDNLIASGESENFLQKAIQEQGRGQILDTISEIQERHDAVKEIEKNLLELHQVFLDMAALVEAQGQQLNNIESHVAKASSFVRRGTDQLQDAREYQKSSRKWTC 272          
BLAST of CV887134 vs. ExPASy Swiss-Prot
Match: SY123_ARATH (Syntaxin-123 OS=Arabidopsis thaliana GN=SYP123 PE=2 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 5.108e-46
Identity = 93/175 (53.14%), Postives = 120/175 (68.57%), Query Frame = -2
Query:  337 RENLTSRQKPGCGKGTGVDRSRTATTLGLKKKFKDKMGEFQVLRENIHQXXXXXXXXXXXXXTGKRADEETIDQLIETGDSEQIFQKAIQEQGRGQIMDTLAEIQERHDAVRDLERKLLELQQIFLDMAVLVDAQGDMLDNIESQVSSAVDHVQSGNTALQKAKKLQKNSRKWMC 861
            + N   R+  GCG G+  DR+RT+   GL KK KD M +FQ LR  +               TG++ADEET+++LI +G+SE+  QKAIQEQGRGQ+MDTL+EIQERHD V+++ER LLEL Q+FLDMA LV+AQG+ML++IES VS A   V  G   L  AK LQ+N+RKW C
Sbjct:  106 KSNAAQRKVAGCGPGSSADRTRTSVVSGLGKKLKDMMDDFQRLRTKMATEYKETVERRYFTVTGQKADEETVEKLISSGESERFLQKAIQEQGRGQVMDTLSEIQERHDTVKEIERSLLELHQVFLDMAALVEAQGNMLNDIESNVSKASSFVMRGTDQLHGAKVLQRNNRKWAC 280          
BLAST of CV887134 vs. ExPASy Swiss-Prot
Match: SY121_ARATH (Syntaxin-121 OS=Arabidopsis thaliana GN=SYP121 PE=1 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 2.535e-45
Identity = 94/201 (46.77%), Postives = 122/201 (60.70%), Query Frame = -2
Query:  259 RENLTSRQKPGCGKGTGVDRSRTATTLGLKKKFKDKMGEFQVLRENIHQXXXXXXXXXXXXXTGKRADEETIDQLIETGDSEQIFQKAIQEQGRGQIMDTLAEIQERHDAVRDLERKLLELQQIFLDMAVLVDAQGDMLDNIESQVSSAVDHVQSGNTALQKAKKLQKNSRKWMCXXXXXXXXXXXXXXXXXIKPWSSNKG 861
            R N  +R  PGCG G+  DR+RT+   GL+KK  D M  F  LRE I               TG+  DE T+D+LI TG+SE+  QKAIQEQGRG+++DT+ EIQERHDAV+D+E+ L EL Q+FLDMAVLV+ QG  LD+IES V  A   ++ G   LQ A+  QKN+RKW C                 +KPW+++ G
Sbjct:  114 RANAANRSLPGCGPGSSSDRTRTSVLNGLRKKLMDSMDSFNRLRELISSEYRETVQRRYFTVTGENPDERTLDRLISTGESERFLQKAIQEQGRGRVLDTINEIQERHDAVKDIEKNLRELHQVFLDMAVLVEHQGAQLDDIESHVGRASSFIRGGTDQLQTARVYQKNTRKWTCIAIIILIIIITVVVLAVLKPWNNSSG 314          
BLAST of CV887134 vs. ExPASy Swiss-Prot
Match: SY124_ARATH (Syntaxin-124 OS=Arabidopsis thaliana GN=SYP124 PE=2 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 2.146e-44
Identity = 90/175 (51.43%), Postives = 119/175 (68.00%), Query Frame = -2
Query:  337 RENLTSRQKPGCGKGTGVDRSRTATTLGLKKKFKDKMGEFQVLRENIHQXXXXXXXXXXXXXTGKRADEETIDQLIETGDSEQIFQKAIQEQGRGQIMDTLAEIQERHDAVRDLERKLLELQQIFLDMAVLVDAQGDMLDNIESQVSSAVDHVQSGNTALQKAKKLQKNSRKWMC 861
            + N  SR   GCG G+  DR+RT+   GL KK KD M  FQ LR  ++              TG++ADE+TI+ LI +G+SE   QKAIQEQGRGQI+DT++EIQERHDAV+++E+ L+EL Q+FLDMA LV++QG  L++IES VS A   V+ G   LQ A++ QK+SRKW C
Sbjct:  103 KANANSRNVSGCGPGSSTDRTRTSVVSGLGKKLKDLMDSFQGLRARMNAEYKETVERRYFTITGEQADEQTIENLISSGESENFLQKAIQEQGRGQILDTISEIQERHDAVKEIEKNLIELHQVFLDMAALVESQGQQLNDIESHVSKASSFVRRGTDQLQDAREYQKSSRKWTC 277          
BLAST of CV887134 vs. ExPASy Swiss-Prot
Match: SY122_ARATH (Syntaxin-122 OS=Arabidopsis thaliana GN=SYP122 PE=1 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.538e-42
Identity = 95/201 (47.26%), Postives = 120/201 (59.70%), Query Frame = -2
Query:  259 RENLTSRQKPGCGKGTGVDRSRTATTLGLKKKFKDKMGEFQVLRENIHQXXXXXXXXXXXXXTGKRADEETIDQLIETGDSEQIFQKAIQEQGRGQIMDTLAEIQERHDAVRDLERKLLELQQIFLDMAVLVDAQGDMLDNIESQVSSAVDHVQSGNTALQKAKKLQKNSRKWMCXXXXXXXXXXXXXXXXXIKPWSSNKG 861
            R N  +R  P  G G+  DR RT+   GL+KK KD+M +F  +RE I               TG+  DE T+++LI TG+SE   QKAIQEQGRG+I+DT+ EIQERHDAV+D+E+ L EL Q+FLDMAVLV+ QG  LD+IE  V  A   V+SG   L KA+  QKN+RKW C                 +KPW SN G
Sbjct:  113 RANEVNRSLPESGPGSSSDRQRTSVVNGLRKKLKDEMEKFSRVRETITNEYKETVGRMCFTVTGEYPDEATLERLISTGESETFLQKAIQEQGRGRILDTINEIQERHDAVKDIEKSLNELHQVFLDMAVLVEHQGAQLDDIEGNVKRANSLVRSGADRLVKARFYQKNTRKWTCFAILLLLIIVVLIVVFTVKPWESNGG 313          
BLAST of CV887134 vs. ExPASy Swiss-Prot
Match: SY111_ARATH (Syntaxin-related protein KNOLLE OS=Arabidopsis thaliana GN=KN PE=1 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 2.226e-33
Identity = 73/162 (45.06%), Postives = 108/162 (66.67%), Query Frame = -2
Query:  337 GTGVDRSRTATTLGLKKKFKDKMGEFQVLRENIHQXXXXXXXXXXXXXTGKRADEETIDQLI-ETGDSEQIFQKAIQEQGRGQIMDTLAEIQERHDAVRDLERKLLELQQIFLDMAVLVDAQGDMLDNIESQVSSAVDHVQSGNTALQKAKKLQKNSRKWMC 819
            GT V RSRTA T GL+KK K+ M EFQ LR+ +               TG+ A++E I+++I +    E+   +AIQE G+G++++T+ EIQ+R+DA +++E+ LLEL Q+FLDMAV+V++QG+ +D IE  V +A  +V  G   L+ AK  Q+NSRKWMC
Sbjct:  125 GTPVYRSRTAVTNGLRKKLKEVMMEFQGLRQKMMSEYKETVERRYFTVTGEHANDEMIEKIITDNAGGEEFLTRAIQEHGKGKVLETVVEIQDRYDAAKEIEKSLLELHQVFLDMAVMVESQGEQMDEIEHHVINASHYVADGANELKTAKSHQRNSRKWMC 286          
BLAST of CV887134 vs. ExPASy Swiss-Prot
Match: SY112_ARATH (Syntaxin-112 OS=Arabidopsis thaliana GN=SYP112 PE=2 SV=2)

HSP 1 Score: 100.523 bits (249), Expect = 1.267e-20
Identity = 56/161 (34.78%), Postives = 90/161 (55.90%), Query Frame = -2
Query:  340 KGTGVDRSRTATTLGLKKKFKDKMGEFQVLRENIHQXXXXXXXXXXXXXTGKRADEETIDQLIETGDSEQIFQKAIQEQGRGQIMDTLAEIQERHDAVRDLERKLLELQQIFLDMAVLVDAQGDMLDNIESQVSSAVDHVQSGNTALQKAKKLQKNSRKWM 822
            +G+ VDR+RT+ T G++KK +D M EF  LRE I               TG+    E ++++I    S     K  + +    +     + +ERH+AV D++R L  L Q+FLDMAVLV+ QGD +D+IE+ V++A   V  G  +L  A +++K ++ W+
Sbjct:  128 EGSCVDRTRTSITNGVRKKLRDTMSEFHRLRERIFADYREDLKRKYFLATGEEPSNEDMEKMISGSGSCSDLVKTFEVKPEMDL-----KTKERHEAVNDIKRSLNRLHQVFLDMAVLVETQGDRIDDIEANVANAGSFVSGGTNSLYYANQMKKKTKSWV 283          
BLAST of CV887134 vs. ExPASy Swiss-Prot
Match: STX12_MOUSE (Syntaxin-12 OS=Mus musculus GN=Stx12 PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.357e-14
Identity = 46/147 (31.29%), Postives = 72/147 (48.98%), Query Frame = -2
Query:  337 LKKKFKDKMGEFQVLRENIHQXXXXXXXXXXXXXTGKRADEETIDQLIETGDSEQIFQKAIQEQGRGQIMDTLAEIQERHDAVRDLERKLLELQQIFLDMAVLVDAQGDMLDNIESQVSSAVDHVQSGNTALQKAKKLQKNSRKWMC 777
            L   F   +  FQV++  + +                  D +  +QL+     E+  Q   QE+        L  I+ER  A+R LE  +L++ QIF D+A+++  QGD++D+IE+ V S+  HV+     LQ+A   QK SRK MC
Sbjct:  106 LMNDFSSALNNFQVVQRKVSEKEKESIARARAGSRLSAEDRQREEQLVSFDSHEEWNQMQSQEEEAAITEQDLELIKERETAIRQLEADILDVNQIFKDLAMMIHDQGDLIDSIEANVESSEVHVERATDQLQRAAYYQKKSRKKMC 252          
The following BLAST results are available for this feature:
BLAST of CV887134 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 38
Match NameE-valueIdentityDescription
SY132_ARATH2.126e-7674.26Syntaxin-132 OS=Arabidopsis thaliana GN=SYP132 PE=... [more]
SY131_ARATH5.419e-7268.81Putative syntaxin-131 OS=Arabidopsis thaliana GN=S... [more]
SY125_ARATH2.994e-4653.14Syntaxin-125 OS=Arabidopsis thaliana GN=SYP125 PE=... [more]
SY123_ARATH5.108e-4653.14Syntaxin-123 OS=Arabidopsis thaliana GN=SYP123 PE=... [more]
SY121_ARATH2.535e-4546.77Syntaxin-121 OS=Arabidopsis thaliana GN=SYP121 PE=... [more]
SY124_ARATH2.146e-4451.43Syntaxin-124 OS=Arabidopsis thaliana GN=SYP124 PE=... [more]
SY122_ARATH1.538e-4247.26Syntaxin-122 OS=Arabidopsis thaliana GN=SYP122 PE=... [more]
SY111_ARATH2.226e-3345.06Syntaxin-related protein KNOLLE OS=Arabidopsis tha... [more]
SY112_ARATH1.267e-2034.78Syntaxin-112 OS=Arabidopsis thaliana GN=SYP112 PE=... [more]
STX12_MOUSE1.357e-1431.29Syntaxin-12 OS=Mus musculus GN=Stx12 PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_029D02_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_029_T7_D02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV887134 ID=CV887134; Name=CV887134; organism=Citrus sinensis; type=EST; length=862bp
TTTTTTTTTTAAAGCCAACAAATTCAAATGTTACATAAAGTATGTCAAAG
AATATAGAAATATATACTTCAGTTAAAATCGCATGACACAGAGTTGACTT
GATCAGAAAAGGGTGAGGGAGGGAAGGAAAGAGCTACAGGATTGGAATAT
GGAACTCAAATGACAGAAATTGGCGGGAAGGGTTAAAAAAAAGGAAAATG
ACCATTGACGGATTGACCAAAACACATATCTATACAAACAAATGTCGAGC
AGCTAAGCACCTTTGTTGCTACTCCATGGCTTGATTACCGCAACAACTAT
GATTGCAACAATGATGAGAAGGATGATGATGGCAATGCACATCCATTTCC
TGGAGTTCTTCTGTAGCTTTTTCGCCTTTTGGAGGGCAGTATTGCCTGAC
TGCACGTGATCTACAGCACTTGACACCTGAGATTCTATATTGTCCAGCAT
GTCTCCCTGTGCATCTACCAACACCGCCATATCCAGAAAGATCTGTTGTA
ACTCAAGAAGCTTCCTTTCCAAATCTCTAACGGCATCATGGCGTTCTTGA
ATTTCAGCCAGAGTGTCCATTATCTGGCCTCGACCTTGTTCTTGGATTGC
TTTCTGGAATATCTGTTCACTGTCCCCGGTCTCAATCAATTGGTCAATTG
TCTCTTCATCAGCCCTTTTGCCGGTTACTGTATAAACTCGCCTCTCCACC
ACCTCTCGATACTCTTGATGGATGTTTTCCCTTAGAACCTGAAATTCACC
CATTTTGTCTTTGAACTTCTTTTTCAAGCCAAGAGTTGTTGCTGTTCTTG
ATCGATCTACTCCTGTTCCTTTTCCACAGCCAGGCTTCTGCCTACTTGTT
AAATTCTCTCTA
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