EY665667

Overview
NameEY665667
Unique NameEY665667
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length944
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY665667_ssr355 microsatellite EY665667_ssr355:355..369. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY665667 vs. ExPASy Swiss-Prot
Match: DNJH_CUCSA (DnaJ protein homolog OS=Cucumis sativus GN=DNAJ1 PE=2 SV=1)

HSP 1 Score: 237.269 bits (604), Expect = 9.948e-62
Identity = 151/273 (55.31%), Postives = 165/273 (60.44%), Query Frame = 1
Query:  109 MFGRAPKKSDNTKYYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPFDI-XXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMEVSIRHPWPLYDSTNAASLAMRARVLEKTIMDKGPCPQWKGGKRPSRKKNSWRVIG*KRGCKRDKKINFPLKKIKETPPTCSQGEFGFFFHKQKKPPKILR 924
            MFGR PKKSDNTKYYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKE        HDPFDI                        EDVIHPLKVSLEDLYNGTSKKLSLSRNVI                    QGSGM+VSIRH  P              +   +TI DK  C Q KG K    KK    ++  ++G +  +KI FP  +  E P T + G+  F   +QK+ PK  R
Sbjct:    1 MFGR-PKKSDNTKYYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKE-GMGGGGGHDPFDIFQSFFGGSPFGGGGSSRGRRQRRGEDVIHPLKVSLEDLYNGTSKKLSLSRNVICSKCKGKGSKSGASMKCPGCQGSGMKVSIRHLGPSM-IQQMQHPCNECKGTGETINDKDRCSQCKGEKVVQEKKVLEVIV--EKGMQNAQKITFP-GEADEAPDTVT-GDIVFVL-QQKEHPKFKR 265          
BLAST of EY665667 vs. ExPASy Swiss-Prot
Match: DNJH2_ALLPO (DnaJ protein homolog 2 OS=Allium porrum GN=LDJ2 PE=2 SV=1)

HSP 1 Score: 231.491 bits (589), Expect = 5.459e-60
Identity = 140/275 (50.91%), Postives = 165/275 (60.00%), Query Frame = 1
Query:  109 MFGRAPKKSDNTKYYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPFDI-XXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMEVSIRH--PWPLYDSTNAASLAMRARVLEKTIMDKGPCPQWKGGKRPSRKKNSWRVIG*KRGCKRDKKINFPLKKIKETPPTCSQGEFGFFFHKQKKPPKILR 924
            MFGRAPKKSDNTKYYE+LGVSKNA+ +DLKKAYRKAAIKNHPDKGGDPEKFKE+ QAYEVL+DPEKREIYDQYGE+ LKE        HDPFDI                        EDV+HPLKVSLEDLYNGTSKKLSLSRNV+                    QGSGM+VSIR   P  +    +  +     +   + I DK  CPQ KG K   +KK     +  ++G +  +KI FP  +  E P T + G+  F   +QK+ PK  R
Sbjct:    1 MFGRAPKKSDNTKYYEVLGVSKNATPEDLKKAYRKAAIKNHPDKGGDPEKFKEIGQAYEVLNDPEKREIYDQYGEEGLKEGMGGGGGVHDPFDIFQSFFGGGGFGGGGSSRGRRQRRGEDVVHPLKVSLEDLYNGTSKKLSLSRNVLCTKCKGKGSKSGASMNCASCQGSGMKVSIRQLGPGMIQQMQHPCN---ECKGTGEMISDKDRCPQCKGEKVVQQKK--VLEVHVEKGMQNGQKITFP-GEADEAPDTVT-GDIVFVL-QQKEHPKFKR 267          
BLAST of EY665667 vs. ExPASy Swiss-Prot
Match: DNJH_ATRNU (DnaJ protein homolog ANJ1 OS=Atriplex nummularia PE=2 SV=1)

HSP 1 Score: 230.72 bits (587), Expect = 9.311e-60
Identity = 141/273 (51.65%), Postives = 163/273 (59.71%), Query Frame = 1
Query:  109 MFGRAPKKSDNTKYYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPFDI-XXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMEVSIRHPWPLYDSTNAASLAMRARVLEKTIMDKGPCPQWKGGKRPSRKKNSWRVIG*KRGCKRDKKINFPLKKIKETPPTCSQGEFGFFFHKQKKPPKILR 924
            MFGRAPKKSD+T+YYEILGV K+AS +DLKKAY+KAAIKNHPDKGGDPEKFKELA AYEVLSDPEKREIYDQYGEDALKE        HDPFDI                        EDV+HPLKVSLEDL+ GT+KKLSLSRNVI                    QG+GM+VSIRH  P              +   +TI DK  CPQ KG K    KK    V+  ++G +  +KI FP  +  E P T + G+  F   +QK+ PK  R
Sbjct:    1 MFGRAPKKSDSTRYYEILGVPKDASPEDLKKAYKKAAIKNHPDKGGDPEKFKELAHAYEVLSDPEKREIYDQYGEDALKEGMGGGGGMHDPFDIFQSFFGGSPFGGVGSSRGRRQRRGEDVVHPLKVSLEDLFTGTTKKLSLSRNVICSKCTGKGSKSGASMKCSGCQGTGMKVSIRHLGPSM-IQQMQHPCNECKGTGETINDKDRCPQCKGEKVVQEKKVLEVVV--EKGMQHGQKITFP-GEADEAPDTVT-GDIVFVL-QQKEHPKFKR 267          
BLAST of EY665667 vs. ExPASy Swiss-Prot
Match: DNAJ3_ARATH (Chaperone protein dnaJ 3 OS=Arabidopsis thaliana GN=ATJ3 PE=1 SV=2)

HSP 1 Score: 223.402 bits (568), Expect = 1.487e-57
Identity = 138/275 (50.18%), Postives = 162/275 (58.91%), Query Frame = 1
Query:  109 MFGRAP-KKSDNTKYYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMEVSIRH--PWPLYDSTNAASLAMRARVLEKTIMDKGPCPQWKGGKRPSRKKNSWRVIG*KRGCKRDKKINFPLKKIKETPPTCSQGEFGFFFHKQKKPPKILR 924
            MFGR P KKSDNTK+YEILGV K+AS +DLKKAY+KAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKE        HDPFDI                       EDV+HPLKVSLED+Y GT KKLSLSRN +                    QGSGM+VSIR   P  +    +A +     +   +TI D+  CPQ KG K    KK     +  ++G +  +KI F   +  E P T + G+  F   +QK+ PK  R
Sbjct:    1 MFGRGPSKKSDNTKFYEILGVPKSASPEDLKKAYKKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGGGGHDPFDIFSSFFGGGPFGGNTSRQRRQRRGEDVVHPLKVSLEDVYLGTMKKLSLSRNALCSKCNGKGSKSGASLKCGGCQGSGMKVSIRQLGPGMIQQMQHACN---ECKGTGETINDRDRCPQCKGDKVIPEKK--VLEVNVEKGMQHSQKITFE-GQADEAPDTVT-GDIVFVL-QQKEHPKFKR 267          
BLAST of EY665667 vs. ExPASy Swiss-Prot
Match: DNAJ2_ARATH (Chaperone protein dnaJ 2 OS=Arabidopsis thaliana GN=ATJ2 PE=1 SV=2)

HSP 1 Score: 215.312 bits (547), Expect = 4.048e-55
Identity = 135/276 (48.91%), Postives = 163/276 (59.06%), Query Frame = 1
Query:  109 MFGRAP-KKSDNTKYYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPFDI-XXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMEVSIRH--PWPLYDSTNAASLAMRARVLEKTIMDKGPCPQWKGGKRPSRKKNSWRVIG*KRGCKRDKKINFPLKKIKETPPTCSQGEFGFFFHKQKKPPKILR 924
            MFGR P +KSDNTK+YEILGV K A+ +DLKKAY+KAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKE        HDPFDI                        EDV+HPLKVSLED+Y GT+KKLSLSR  +                    QGSGM++SIR   P  +    +A +     +   +TI D+  CPQ KG K  S KK     +  ++G + ++KI F   +  E P T + G+  F   +QK+ PK  R
Sbjct:    1 MFGRGPSRKSDNTKFYEILGVPKTAAPEDLKKAYKKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGGGGHDPFDIFSSFFGSGGHPFGSHSRGRRQRRGEDVVHPLKVSLEDVYLGTTKKLSLSRKALCSKCNGKGSKSGASMKCGGCQGSGMKISIRQFGPGMMQQVQHACN---DCKGTGETINDRDRCPQCKGEKVVSEKK--VLEVNVEKGMQHNQKITFS-GQADEAPDTVT-GDIVFVI-QQKEHPKFKR 268          
BLAST of EY665667 vs. ExPASy Swiss-Prot
Match: DNJH1_ALLPO (DnaJ protein homolog 1 (Fragment) OS=Allium porrum GN=DNAJ1 PE=2 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 1.068e-47
Identity = 124/254 (48.82%), Postives = 144/254 (56.69%), Query Frame = 1
Query:  172 KNASQDDLKKAYRKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPFDI-XXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMEVSIRH--PWPLYDSTNAASLAMRARVLEKTIMDKGPCPQWKGGKRPSRKKNSWRVIG*KRGCKRDKKINFPLKKIKETPPTCSQGEFGFFFHKQKKPPKILR 924
            KNAS DDLKKAYRKAAIKNHPDKGGDPEKFKELAQAY+VLSDPEKREIYDQYGEDALKE        HDPFDI                        EDV+HPLKVSLE+LYNGTSKKLSLSRNVI                    QGSGM+VSIR   P  +    +  +     +   + I DK  CP  KG K    KK     +  ++G +  ++I FP  +  E P T + G+  F   +QK+ PK  R
Sbjct:    1 KNASPDDLKKAYRKAAIKNHPDKGGDPEKFKELAQAYDVLSDPEKREIYDQYGEDALKEGMGGGGGDHDPFDIFQSFFGGGGFGGGGSSRGRRQRRGEDVVHPLKVSLEELYNGTSKKLSLSRNVICSKCNGKGSKSGASMRCASCQGSGMKVSIRQLGPGMIQQMQHPCN---DCKGTGEMINDKDRCPLCKGEKVVQEKK--VLEVHVEKGMQNGQRITFP-GEADEAPDTVT-GDIVFVL-QQKEHPKFQR 246          
BLAST of EY665667 vs. ExPASy Swiss-Prot
Match: DNJA4_MOUSE (DnaJ homolog subfamily A member 4 OS=Mus musculus GN=Dnaja4 PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 2.473e-28
Identity = 80/210 (38.10%), Postives = 107/210 (50.95%), Query Frame = 1
Query:  142 TKYYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGDP-EKFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMEVSIRHPWPLYDSTNAASLAMRARVLEKTIMDKGPCPQWKGGKRPSRKK 768
            T+YY+ILGV  +AS +++KKAYRK A+K HPDK  D  EKFK ++QAYEVLSDP+KR+IYDQ GE A+KE          P DI                       ++V+H L V+LEDLYNG +KKL+L +NVI                    +G GM+V I+   P        ++ +  +   + I  K  C    G K    KK
Sbjct:    5 TQYYDILGVKPSASPEEIKKAYRKLALKYHPDKNPDEGEKFKLISQAYEVLSDPKKRDIYDQGGEQAIKEGGSGSPSFSSPMDI------FDMFFGGGGRMTRERRGKNVVHQLSVTLEDLYNGITKKLALQKNVICEKCEGIGGKKGSVEKCPLCKGRGMQVHIQQIGPGM-VQQIQTVCIECKGQGERINPKDRCENCSGAKVTREKK 207          
BLAST of EY665667 vs. ExPASy Swiss-Prot
Match: DNJA4_HUMAN (DnaJ homolog subfamily A member 4 OS=Homo sapiens GN=DNAJA4 PE=1 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 4.219e-28
Identity = 71/170 (41.76%), Postives = 95/170 (55.88%), Query Frame = 1
Query:  142 TKYYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGDP-EKFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMEVSIRHPWP 648
            T+YY+ILGV  +AS +++KKAYRK A+K HPDK  D  EKFK ++QAYEVLSDP+KR++YDQ GE A+KE          P DI                       ++V+H L V+LEDLYNG +KKL+L +NVI                    +G GM++ I+   P
Sbjct:    5 TQYYDILGVKPSASPEEIKKAYRKLALKYHPDKNPDEGEKFKLISQAYEVLSDPKKRDVYDQGGEQAIKEGGSGSPSFSSPMDI------FDMFFGGGGRMARERRGKNVVHQLSVTLEDLYNGVTKKLALQKNVICEKCEGVGGKKGSVEKCPLCKGRGMQIHIQQIGP 168          
BLAST of EY665667 vs. ExPASy Swiss-Prot
Match: DNJA2_RAT (DnaJ homolog subfamily A member 2 OS=Rattus norvegicus GN=Dnaja2 PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 1.227e-27
Identity = 71/171 (41.52%), Postives = 93/171 (54.39%), Query Frame = 1
Query:  139 NTKYYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGDP-EKFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMEVSIRHPWP 648
            +TK Y+ILGV   AS+++LKKAYRK A + HPDK  +  +KFKE++ AYEVLS+PEKRE+YD+YGE  L+E         D F                         ED++HPLKVSLEDLYNG + KL LS+NV+                    +G G+ + IR   P
Sbjct:    6 DTKLYDILGVPPGASENELKKAYRKLAKEYHPDKNPNAGDKFKEISFAYEVLSNPEKRELYDRYGEQGLREGSGGGGGMDDIFSHIFGGGLFGFMGNQSRSRNGRRRGEDMMHPLKVSLEDLYNGKTTKLQLSKNVLCSACSGQGGKSGAVQKCSACRGRGVRIMIRQLAP 176          
BLAST of EY665667 vs. ExPASy Swiss-Prot
Match: DNJA2_MOUSE (DnaJ homolog subfamily A member 2 OS=Mus musculus GN=Dnaja2 PE=1 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 1.227e-27
Identity = 71/171 (41.52%), Postives = 93/171 (54.39%), Query Frame = 1
Query:  139 NTKYYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGDP-EKFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMEVSIRHPWP 648
            +TK Y+ILGV   AS+++LKKAYRK A + HPDK  +  +KFKE++ AYEVLS+PEKRE+YD+YGE  L+E         D F                         ED++HPLKVSLEDLYNG + KL LS+NV+                    +G G+ + IR   P
Sbjct:    6 DTKLYDILGVPPGASENELKKAYRKLAKEYHPDKNPNAGDKFKEISFAYEVLSNPEKRELYDRYGEQGLREGSGGGGGMDDIFSHIFGGGLFGFMGNQSRSRNGRRRGEDMMHPLKVSLEDLYNGKTTKLQLSKNVLCSACSGQGGKSGAVQKCSACRGRGVRIMIRQLAP 176          
The following BLAST results are available for this feature:
BLAST of EY665667 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNJH_CUCSA9.948e-6255.31DnaJ protein homolog OS=Cucumis sativus GN=DNAJ1 P... [more]
DNJH2_ALLPO5.459e-6050.91DnaJ protein homolog 2 OS=Allium porrum GN=LDJ2 PE... [more]
DNJH_ATRNU9.311e-6051.65DnaJ protein homolog ANJ1 OS=Atriplex nummularia P... [more]
DNAJ3_ARATH1.487e-5750.18Chaperone protein dnaJ 3 OS=Arabidopsis thaliana G... [more]
DNAJ2_ARATH4.048e-5548.91Chaperone protein dnaJ 2 OS=Arabidopsis thaliana G... [more]
DNJH1_ALLPO1.068e-4748.82DnaJ protein homolog 1 (Fragment) OS=Allium porrum... [more]
DNJA4_MOUSE2.473e-2838.10DnaJ homolog subfamily A member 4 OS=Mus musculus ... [more]
DNJA4_HUMAN4.219e-2841.76DnaJ homolog subfamily A member 4 OS=Homo sapiens ... [more]
DNJA2_RAT1.227e-2741.52DnaJ homolog subfamily A member 2 OS=Rattus norveg... [more]
DNJA2_MOUSE1.227e-2741.52DnaJ homolog subfamily A member 2 OS=Mus musculus ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-102-092-C06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665667 ID=EY665667; Name=EY665667; organism=Citrus sinensis; type=EST; length=944bp
TAATAGGAGGAAGGCGAAGCTGCAGTACGGTCGGATTCCGGGTCGACCCA
CGCGTCCGCGCTCGCCGTCTCGCGTCTACTCTGAAGATCTGAAATTTTTT
AGTACAAGATGTTCGGAAGAGCGCCAAAGAAAAGCGATAACACAAAGTAC
TATGAGATTCTCGGAGTCTCAAAAAACGCTTCGCAAGATGATCTGAAGAA
GGCTTATAGGAAAGCCGCCATCAAAAACCATCCTGACAAGGGCGGTGATC
CTGAGAAGTTTAAAGAGTTGGCACAAGCGTATGAGGTTCTGAGTGACCCA
GAGAAGCGTGAAATATATGATCAATACGGCGAGGATGCGCTTAAAGAGGG
AATGGGTGGTGGTGGTGGTGCCCATGACCCATTCGACATATTCCAATCCT
TCTTCGGTGGCAGCCCATTTGGTGGTGGGAGCAGCAGAGGAAGAAGGCAA
AGGAGGGGAGAGGATGTAATCCATCCCCTCAAGGTTTCTTTGGAGGATCT
CTACAATGGGACATCTAAGAAGCTCTCGCTCTCCCGCAATGTAATCTGCA
CCAAGTGCAAAGGGAAGGGGTCTAAGTCAGGTGCATCAATGAAATGTTCT
GGCTGCCAGGGATCTGGAATGGAAGTTTCAATAAGACACCCTTGGCCCCT
CTATGATTCAACAAATGCAGCATCCCTTGCAATGAGGGCCAGGGTACTGG
AGAAAACAATAATGGACAAGGGACCCTGCCCCCAATGGAAAGGGGGAAAA
AGGCCTTCCAGGAAAAAAAATTCTTGGAGGGTTATTGGTTGAAAAAGGGG
ATGCAAAAGGGACAAAAAAATTAACTTCCCCTTGAAAAAAATTAAGGAAA
CCCCCCCAACCTGTTCCCAGGGGGAATTTGGATTTTTTTTCCACAAACAA
AAAAAACCCCCCAAAATTTTAAGGGGAAGGGGGGGGGGACCCTT
back to top