CV887125

Overview
NameCV887125
Unique NameCV887125
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length803
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV887125 vs. ExPASy Swiss-Prot
Match: CALR_RICCO (Calreticulin OS=Ricinus communis PE=2 SV=1)

HSP 1 Score: 450.284 bits (1157), Expect = 5.818e-126
Identity = 204/223 (91.48%), Postives = 214/223 (95.96%), Query Frame = 2
Query:   92 VFFEERFDDGWESQWVKSDWKKDENTAGEWNYTAGKWNGDPNDKGIQTSEDYRFYAISAEFPEFSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTNKLIKKEVPCETDQLTHVYTFILRPDATYSILIDNAEKQSGSLYSDWDLLPPKTIKDPDAKKPEDWDDKEYIPDPEDKKPEGYDDIPKEI 760
            VFFEERF+DGWE++WVKSDWKKDENTAGEWNYT+GKWNGDPNDKGIQTSEDYRFYAISAEFPEFSNKDKTLVFQFSVKHEQKLDCGGGYMKLLS   DQKKFGGDTPYSIMFGPDICGYSTKKVHAIL YN TN LIKKEVPCETDQLTHVYT ++RPDATYSILIDN EKQ+GSLY+DWDLLPPK IKDP+AKKPEDWD+KEYIPDPEDKKPEGYDDIPKEI
Sbjct:   22 VFFEERFEDGWENRWVKSDWKKDENTAGEWNYTSGKWNGDPNDKGIQTSEDYRFYAISAEFPEFSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSSSTDQKKFGGDTPYSIMFGPDICGYSTKKVHAILNYNDTNHLIKKEVPCETDQLTHVYTLVIRPDATYSILIDNVEKQTGSLYTDWDLLPPKKIKDPEAKKPEDWDEKEYIPDPEDKKPEGYDDIPKEI 244          
BLAST of CV887125 vs. ExPASy Swiss-Prot
Match: CALR_PRUAR (Calreticulin OS=Prunus armeniaca PE=2 SV=1)

HSP 1 Score: 446.047 bits (1146), Expect = 1.097e-124
Identity = 202/224 (90.18%), Postives = 215/224 (95.98%), Query Frame = 2
Query:   92 VFFEERFDDGWESQWVKSDWKKDENTAGEWNYTAGKWNGDPNDKGIQTSEDYRFYAISAEFPEFSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTNKLIKKEVPCETDQLTHVYTFILRPDATYSILIDNAEKQSGSLYSDWDLLPPKTIKDPDAKKPEDWDDKEYIPDPEDKKPEGYDDIPKEIT 763
            VFFEERF+DGW+ +WV S+WKKDEN AGEWNYT+GKWNGDPNDKGIQTSEDYRFYAISAEFPEFSNKDKTLVFQFSVKHEQKLDCGGGY+KLLSG+VDQKKFGGDTPYSIMFGPDICGYSTKKVHAIL YN TN LIKK+VPCETDQLTHVYTFI+RPDATYSILIDN EKQ+GSLYSDWDLLP K IKDP+AKKPEDW+D+EYIPDPEDKKPEGYDDIPKEIT
Sbjct:   26 VFFEERFEDGWDKRWVTSEWKKDENLAGEWNYTSGKWNGDPNDKGIQTSEDYRFYAISAEFPEFSNKDKTLVFQFSVKHEQKLDCGGGYIKLLSGDVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILNYNNTNNLIKKDVPCETDQLTHVYTFIIRPDATYSILIDNLEKQTGSLYSDWDLLPAKKIKDPEAKKPEDWEDQEYIPDPEDKKPEGYDDIPKEIT 249          
BLAST of CV887125 vs. ExPASy Swiss-Prot
Match: CALR_NICPL (Calreticulin OS=Nicotiana plumbaginifolia GN=CAL1 PE=2 SV=1)

HSP 1 Score: 444.891 bits (1143), Expect = 2.444e-124
Identity = 205/224 (91.52%), Postives = 214/224 (95.54%), Query Frame = 2
Query:   92 VFFEERFDDGWESQWVKSDWKKDENTAGEWNYTAGKWNGDPNDKGIQTSEDYRFYAISAEFPEFSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTNKLIKKEVPCETDQLTHVYTFILRPDATYSILIDNAEKQSGSLYSDWDLLPPKTIKDPDAKKPEDWDDKEYIPDPEDKKPEGYDDIPKEIT 763
            VFFEE F+DGWES+WVKS+WKKDEN AGEWN+T+GKWNGD NDKGIQTSEDYRFYAISAEFPEFSNK K LVFQFSVKHEQKLDCGGGYMKLLSG+VDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYN TN LIKKEVPCETDQLTHVYTFILRPDATYSILIDN EKQSGSLYSDWDLLPPKTIKDP AKKPEDWD+KE+I DPEDKKPEGYDDIP+EIT
Sbjct:   29 VFFEESFNDGWESRWVKSEWKKDENMAGEWNHTSGKWNGDANDKGIQTSEDYRFYAISAEFPEFSNKGKNLVFQFSVKHEQKLDCGGGYMKLLSGDVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNDTNHLIKKEVPCETDQLTHVYTFILRPDATYSILIDNVEKQSGSLYSDWDLLPPKTIKDPSAKKPEDWDEKEFIDDPEDKKPEGYDDIPEEIT 252          
BLAST of CV887125 vs. ExPASy Swiss-Prot
Match: CALR_BETVU (Calreticulin OS=Beta vulgaris PE=2 SV=1)

HSP 1 Score: 441.81 bits (1135), Expect = 2.069e-123
Identity = 202/224 (90.18%), Postives = 212/224 (94.64%), Query Frame = 2
Query:   92 VFFEERFDDGWESQWVKSDWKKDENTAGEWNYTAGKWNGDPNDKGIQTSEDYRFYAISAEFPEFSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTNKLIKKEVPCETDQLTHVYTFILRPDATYSILIDNAEKQSGSLYSDWDLLPPKTIKDPDAKKPEDWDDKEYIPDPEDKKPEGYDDIPKEIT 763
            VFFEERF+DGWE +WVKS+WKKDE+ AGEWNYT+GKWNGD NDKGIQTSEDYRFYAISAEFPEFSNKD TLVFQFSVKHEQKLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPDICGYSTKKVHAI  YN TN LIKK+VPCETDQLTHVYTFILRPDATYSILIDN EKQ+GSLY+DWDLLP K IKDP+AKKPEDWDDKE+IPDPEDKKPEGYDDIP EIT
Sbjct:   27 VFFEERFEDGWEKRWVKSEWKKDESMAGEWNYTSGKWNGDANDKGIQTSEDYRFYAISAEFPEFSNKDNTLVFQFSVKHEQKLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPDICGYSTKKVHAIFNYNDTNHLIKKDVPCETDQLTHVYTFILRPDATYSILIDNQEKQTGSLYTDWDLLPAKKIKDPEAKKPEDWDDKEFIPDPEDKKPEGYDDIPAEIT 250          
BLAST of CV887125 vs. ExPASy Swiss-Prot
Match: CALR_BERST (Calreticulin OS=Berberis stolonifera PE=2 SV=1)

HSP 1 Score: 440.654 bits (1132), Expect = 4.610e-123
Identity = 201/224 (89.73%), Postives = 214/224 (95.54%), Query Frame = 2
Query:   92 VFFEERFDDGWESQWVKSDWKKDENTAGEWNYTAGKWNGDPNDKGIQTSEDYRFYAISAEFPEFSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTNKLIKKEVPCETDQLTHVYTFILRPDATYSILIDNAEKQSGSLYSDWDLLPPKTIKDPDAKKPEDWDDKEYIPDPEDKKPEGYDDIPKEIT 763
            VFFEERF+DGWES+WVKSDWK+DEN AGEWN+T+GKWNGD NDKGIQTSEDYRFYAISA FPEFSNK KTLVFQFSVKHEQKLDCGGGYMKLLSG+VDQKKFGGDTPYSIMFGPDICGYSTKKVHAILT   TN LIKK+VPCETDQLTHVYTFILRPDA+YSILIDN EKQSGS+Y+DWD+LPPK IKDP+AKKPEDW+DKEYIPDPEDKKPEGYDDIPKEIT
Sbjct:   24 VFFEERFEDGWESKWVKSDWKRDENMAGEWNFTSGKWNGDANDKGIQTSEDYRFYAISAAFPEFSNKGKTLVFQFSVKHEQKLDCGGGYMKLLSGDVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTKGETNHLIKKDVPCETDQLTHVYTFILRPDASYSILIDNVEKQSGSVYTDWDILPPKQIKDPEAKKPEDWEDKEYIPDPEDKKPEGYDDIPKEIT 247          
BLAST of CV887125 vs. ExPASy Swiss-Prot
Match: CALR2_ARATH (Calreticulin-2 OS=Arabidopsis thaliana GN=CRT2 PE=1 SV=3)

HSP 1 Score: 437.958 bits (1125), Expect = 2.988e-122
Identity = 200/223 (89.69%), Postives = 212/223 (95.07%), Query Frame = 2
Query:   92 VFFEERFDDGWESQWVKSDWKKDENTAGEWNYTAGKWNGDPNDKGIQTSEDYRFYAISAEFPEFSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTNKLIKKEVPCETDQLTHVYTFILRPDATYSILIDNAEKQSGSLYSDWDLLPPKTIKDPDAKKPEDWDDKEYIPDPEDKKPEGYDDIPKEI 760
            V FEERFDDGWE++WVKS+WKKD+NTAGEW +TAG W+GD NDKGIQTSEDYRFYAISAEFPEFSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSG+VDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYN  N LIKK+VPCETDQLTHVYTFILRPDATYSILIDN EKQ+GSLYSDWDLLPPK IKDP AKKPEDWD++EYI DPEDKKP+GYDDIPKEI
Sbjct:   24 VIFEERFDDGWENRWVKSEWKKDDNTAGEWKHTAGNWSGDANDKGIQTSEDYRFYAISAEFPEFSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSGDVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNEANHLIKKDVPCETDQLTHVYTFILRPDATYSILIDNVEKQTGSLYSDWDLLPPKKIKDPSAKKPEDWDEQEYISDPEDKKPDGYDDIPKEI 246          
BLAST of CV887125 vs. ExPASy Swiss-Prot
Match: CALR1_ARATH (Calreticulin-1 OS=Arabidopsis thaliana GN=CRT1 PE=1 SV=1)

HSP 1 Score: 437.958 bits (1125), Expect = 2.988e-122
Identity = 206/247 (83.40%), Postives = 215/247 (87.04%), Query Frame = 2
Query:   20 MAKLNPXXXXXXXXXXXXXXXXXHVFFEERFDDGWESQWVKSDWKKDENTAGEWNYTAGKWNGDPNDKGIQTSEDYRFYAISAEFPEFSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTNKLIKKEVPCETDQLTHVYTFILRPDATYSILIDNAEKQSGSLYSDWDLLPPKTIKDPDAKKPEDWDDKEYIPDPEDKKPEGYDDIPKEI 760
            MAKLNP                  V FEE+F+DGWE +WVKSDWKKD+NTAGEW +TAG W+GD NDKGIQTSEDYRFYAISAEFPEFSNKDKTLVFQFSVKHEQKLDCGGGYMKLLS +VDQ KFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTN LIKKEVPCETDQLTHVYTF+LRPDATYSILIDN EKQ+GSLYSDWDLLP K IKDP AKKPEDWDDKEYIPDPED KP GYDDIPKEI
Sbjct:    1 MAKLNPKFISLILFALVVIVSA-EVIFEEKFEDGWEKRWVKSDWKKDDNTAGEWKHTAGNWSGDANDKGIQTSEDYRFYAISAEFPEFSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSDDVDQTKFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTNHLIKKEVPCETDQLTHVYTFVLRPDATYSILIDNVEKQTGSLYSDWDLLPAKKIKDPSAKKPEDWDDKEYIPDPEDTKPAGYDDIPKEI 246          
BLAST of CV887125 vs. ExPASy Swiss-Prot
Match: CALR_ORYSJ (Calreticulin OS=Oryza sativa subsp. japonica GN=Os07g0246200 PE=1 SV=2)

HSP 1 Score: 424.861 bits (1091), Expect = 2.618e-118
Identity = 190/223 (85.20%), Postives = 207/223 (92.83%), Query Frame = 2
Query:   92 VFFEERFDDGWESQWVKSDWKKDENTAGEWNYTAGKWNGDPNDKGIQTSEDYRFYAISAEFPEFSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTNKLIKKEVPCETDQLTHVYTFILRPDATYSILIDNAEKQSGSLYSDWDLLPPKTIKDPDAKKPEDWDDKEYIPDPEDKKPEGYDDIPKEI 760
            VFF+E+F+DGWES+WVKS+WKKDEN AGEWN+T+GKWNGDP DKGIQTSEDYRFYAISAE+PEFSNKDKTLV QFSVKHEQKLDCGGGY+KLL G+VDQKKFGGDTPYSIMFGPDICGYSTKKVH I T N  N LIKK+VPCETDQL+HVYT I+ PDATY+ILIDN EKQSGS+Y  WD+LPPK IKDP+AKKPEDWDDKEYIPDPEDKKPEGYDDIPKEI
Sbjct:   31 VFFQEKFEDGWESRWVKSEWKKDENMAGEWNHTSGKWNGDPEDKGIQTSEDYRFYAISAEYPEFSNKDKTLVLQFSVKHEQKLDCGGGYVKLLGGDVDQKKFGGDTPYSIMFGPDICGYSTKKVHTIFTKNDKNHLIKKDVPCETDQLSHVYTLIIHPDATYTILIDNVEKQSGSIYEHWDILPPKQIKDPEAKKPEDWDDKEYIPDPEDKKPEGYDDIPKEI 253          
BLAST of CV887125 vs. ExPASy Swiss-Prot
Match: CALR_MAIZE (Calreticulin OS=Zea mays GN=CRT PE=2 SV=1)

HSP 1 Score: 404.06 bits (1037), Expect = 4.782e-112
Identity = 183/223 (82.06%), Postives = 202/223 (90.58%), Query Frame = 2
Query:   92 VFFEERFDDGWESQWVKSDWKKDENTAGEWNYTAGKWNGDPNDKGIQTSEDYRFYAISAEFPEFSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTNKLIKKEVPCETDQLTHVYTFILRPDATYSILIDNAEKQSGSLYSDWDLLPPKTIKDPDAKKPEDWDDKEYIPDPEDKKPEGYDDIPKEI 760
            VFF+E+F+DGWES+WVKS+WKKDEN AGEWN+T+GKWNGD  DKGIQTSEDYRFYAISAE+PEFSNKDKTLV QFSVKHEQKLDCGGGY+KLL G+VDQK  GGDT YSI+  PDI  YSTKKVH ILT +G N LIKK+VPC+TDQLTHVYTFI+RPDATYSILIDN EK +GS+Y  WD+LPPK IKDP+AKKPEDWDDKEYIPDPEDKKPEGYDDIPKEI
Sbjct:   27 VFFQEKFEDGWESRWVKSEWKKDENMAGEWNHTSGKWNGDAEDKGIQTSEDYRFYAISAEYPEFSNKDKTLVLQFSVKHEQKLDCGGGYVKLLGGDVDQKTLGGDTSYSIISRPDISRYSTKKVHTILTKDGKNHLIKKDVPCQTDQLTHVYTFIIRPDATYSILIDNEEKHTGSIYEHWDILPPKKIKDPEAKKPEDWDDKEYIPDPEDKKPEGYDDIPKEI 249          
BLAST of CV887125 vs. ExPASy Swiss-Prot
Match: CALR3_ARATH (Calreticulin-3 OS=Arabidopsis thaliana GN=CRT3 PE=2 SV=2)

HSP 1 Score: 330.872 bits (847), Expect = 5.145e-90
Identity = 145/223 (65.02%), Postives = 185/223 (82.96%), Query Frame = 2
Query:   92 VFFEERFDDGWESQWVKSDWKKDENTAGEWNYTAGKWNGDPNDKGIQTSEDYRFYAISAEFPEFSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSGEVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTNKLIKKEVPCETDQLTHVYTFILRPDATYSILIDNAEKQSGSLYSDWDLLPPKTIKDPDAKKPEDWDDKEYIPDPEDKKPEGYDDIPKEI 760
            +F EE F+ GW+S+WV SDWK++E  AG + +TAGKW GDP++KGIQT  D + YAISA+ PEFSNK++TLV Q+SVK EQ ++CGG Y+KLLSG V+QK+FGGDTPYS+MFGPDICG  TKK+H I++Y G N  IKK++ CETD+L H YTFILRPDA+YS+L+DN E++ GS+Y+DWD+LPP+ IK  +AKKPEDWDD+EYI DP D KPEG+D IP+EI
Sbjct:   30 IFLEEHFEGGWKSRWVLSDWKRNEGKAGTFKHTAGKWPGDPDNKGIQTYNDAKHYAISAKIPEFSNKNRTLVVQYSVKIEQDIECGGAYIKLLSGYVNQKQFGGDTPYSLMFGPDICGTQTKKLHVIVSYQGQNYPIKKDLQCETDKLNHFYTFILRPDASYSVLVDNKEREFGSMYTDWDILPPRKIKVKNAKKPEDWDDREYIDDPNDVKPEGFDSIPREI 252          
The following BLAST results are available for this feature:
BLAST of CV887125 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 49
Match NameE-valueIdentityDescription
CALR_RICCO5.818e-12691.48Calreticulin OS=Ricinus communis PE=2 SV=1[more]
CALR_PRUAR1.097e-12490.18Calreticulin OS=Prunus armeniaca PE=2 SV=1[more]
CALR_NICPL2.444e-12491.52Calreticulin OS=Nicotiana plumbaginifolia GN=CAL1 ... [more]
CALR_BETVU2.069e-12390.18Calreticulin OS=Beta vulgaris PE=2 SV=1[more]
CALR_BERST4.610e-12389.73Calreticulin OS=Berberis stolonifera PE=2 SV=1[more]
CALR2_ARATH2.988e-12289.69Calreticulin-2 OS=Arabidopsis thaliana GN=CRT2 PE=... [more]
CALR1_ARATH2.988e-12283.40Calreticulin-1 OS=Arabidopsis thaliana GN=CRT1 PE=... [more]
CALR_ORYSJ2.618e-11885.20Calreticulin OS=Oryza sativa subsp. japonica GN=Os... [more]
CALR_MAIZE4.782e-11282.06Calreticulin OS=Zea mays GN=CRT PE=2 SV=1[more]
CALR3_ARATH5.145e-9065.02Calreticulin-3 OS=Arabidopsis thaliana GN=CRT3 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_029C09_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_029_T3_C09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV887125 ID=CV887125; Name=CV887125; organism=Citrus sinensis; type=EST; length=803bp
CCTCTCTCTCGCTCTAAAAATGGCGAAATTAAACCCTAGCTCTCTCTCTC
TAACTCTCCTCATTATCTTCCTGACAATTGCCTCTGCTCACGTCTTCTTC
GAAGAACGCTTTGACGATGGATGGGAAAGCCAGTGGGTTAAATCTGATTG
GAAGAAAGATGAGAACACGGCTGGAGAATGGAACTACACTGCCGGGAAAT
GGAATGGGGACCCGAATGATAAAGGTATTCAAACTAGTGAAGACTACAGG
TTCTATGCTATTTCAGCTGAATTCCCTGAATTCAGCAACAAGGACAAGAC
ACTCGTGTTCCAGTTTTCTGTTAAGCATGAACAGAAGCTTGACTGTGGTG
GTGGCTACATGAAGTTGCTTAGTGGCGAAGTTGATCAGAAGAAATTTGGT
GGTGATACCCCTTACAGTATCATGTTTGGACCAGATATCTGTGGTTATAG
CACCAAGAAAGTGCATGCCATTCTTACCTACAATGGGACAAACAAATTGA
TCAAGAAGGAAGTACCATGTGAGACTGACCAACTCACTCATGTTTATACT
TTCATCCTCCGTCCAGATGCTACTTACAGCATCCTCATTGACAATGCGGA
GAAACAATCTGGTAGCTTGTACTCTGATTGGGATCTCCTCCCTCCAAAGA
CCATCAAGGATCCTGACGCCAAGAAACCTGAAGACTGGGATGACAAAGAA
TATATTCCCGATCCTGAAGACAAGAAGCCAGAGGGCTATGATGACATTCC
AAAGGAGATAACAGATCCTGATGCCCAGAAGCCTGATGATTGGGATGATG
AGG
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