CV887122

Overview
NameCV887122
Unique NameCV887122
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length825
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV887122 vs. ExPASy Swiss-Prot
Match: GLO2O_ARATH (Hydroxyacylglutathione hydrolase 3, mitochondrial OS=Arabidopsis thaliana GN=GLY3 PE=1 SV=2)

HSP 1 Score: 353.599 bits (906), Expect = 7.802e-97
Identity = 170/213 (79.81%), Postives = 190/213 (89.20%), Query Frame = -1
Query:  187 LIDPVDKTVDRDLNVIKELGLKLVYAMNTHVHADHVTGTGLIKSKVPGVXXXXXXXXXXXADLHVEHGDKVSFGDLFLEVRATPGHTLGCVTYVSGEGPDQPQPRMAFTGDALLIRGCGRTDFQGGSSSQLYKSVHSQIFTLPKDTLIYPAHDYKGFTVSTVGEEIQYNPRLTKDEETFKSIMENLNLSYPKMIDIAVPANLVCGMQDLTSKA 825
            LIDPVDKTVDRDL +I ELGLKL+YAMNTHVHADHVTGTGL+K+K+PGV           ADL +E GDKVS GD++LEVRATPGHT GCVTYV+GEG DQPQPRMAFTGDA+LIRGCGRTDFQ GSS QLY+SVHSQIFTLPKDTLIYPAHDYKGF VSTVGEE+Q+NPRLTKD+ETFK+IM NLNLSYPKMID+AVPAN+VCG+QD+ S+A
Sbjct:   43 LIDPVDKTVDRDLKLIDELGLKLIYAMNTHVHADHVTGTGLLKTKLPGVKSVISKASGSKADLFLEPGDKVSIGDIYLEVRATPGHTAGCVTYVTGEGADQPQPRMAFTGDAVLIRGCGRTDFQEGSSDQLYESVHSQIFTLPKDTLIYPAHDYKGFEVSTVGEEMQHNPRLTKDKETFKTIMSNLNLSYPKMIDVAVPANMVCGLQDVPSQA 255          
BLAST of CV887122 vs. ExPASy Swiss-Prot
Match: ETHE1_HUMAN (Protein ETHE1, mitochondrial OS=Homo sapiens GN=ETHE1 PE=1 SV=2)

HSP 1 Score: 243.817 bits (621), Expect = 8.706e-64
Identity = 126/211 (59.72%), Postives = 147/211 (69.67%), Query Frame = -1
Query:  193 LIDPVDKTVDRDLNVIKELGLKLVYAMNTHVHADHVTGTGLIKSKVPGVXXXXXXXXXXXADLHVEHGDKVSFGDLFLEVRATPGHTLGCVTYVSGEGPDQPQPRMAFTGDALLIRGCGRTDFQGGSSSQLYKSVHSQIFTLPKDTLIYPAHDYKGFTVSTVGEEIQYNPRLTKDEETFKSIMENLNLSYPKMIDIAVPANLVCGMQDLTS 825
            LIDPV +T  RD  +IKELGL+L+YA+NTH HADH+TG+GL++S +PG            ADLH+E GD + FG   LE RA+PGHT GCVT+V  +        MAFTGDALLIRGCGRTDFQ G +  LY SVH +IFTLP D LIYPAHDY GFTVSTV EE   NPRLT   E F  IM NLNL  P+ ID AVPAN+ CG+Q  T+
Sbjct:   50 LIDPVLETAPRDAQLIKELGLRLLYAVNTHCHADHITGSGLLRSLLPGCQSVISRLSGAQADLHIEDGDSIRFGRFALETRASPGHTPGCVTFVLNDHS------MAFTGDALLIRGCGRTDFQQGCAKTLYHSVHEKIFTLPGDCLIYPAHDYHGFTVSTVEEERTLNPRLTLSCEEFVKIMGNLNLPKPQQIDFAVPANMRCGVQTPTA 254          
BLAST of CV887122 vs. ExPASy Swiss-Prot
Match: ETHE1_MOUSE (Protein ETHE1, mitochondrial OS=Mus musculus GN=Ethe1 PE=1 SV=2)

HSP 1 Score: 240.736 bits (613), Expect = 7.370e-63
Identity = 123/207 (59.42%), Postives = 145/207 (70.05%), Query Frame = -1
Query:  205 LIDPVDKTVDRDLNVIKELGLKLVYAMNTHVHADHVTGTGLIKSKVPGVXXXXXXXXXXXADLHVEHGDKVSFGDLFLEVRATPGHTLGCVTYVSGEGPDQPQPRMAFTGDALLIRGCGRTDFQGGSSSQLYKSVHSQIFTLPKDTLIYPAHDYKGFTVSTVGEEIQYNPRLTKDEETFKSIMENLNLSYPKMIDIAVPANLVCGMQ 825
            LIDPV +T  RD  +IKELGLKL+YA+NTH HADH+TGTG+++S +PG            ADLH+  GD + FG   LE RA+PGHT GCVT+V  +        MAFTGDALLIRGCGRTDFQ G +  LY SVH +IFTLP + LIYPAHDY G TVSTV EE   NPRLT   E F  +M+NLNL  P+ IDIAVPAN+ CG+Q
Sbjct:   50 LIDPVLETAHRDAQLIKELGLKLLYAVNTHCHADHITGTGVLRSLLPGCQSVISRLSGAQADLHIGEGDSIRFGRFALETRASPGHTPGCVTFVLND------QSMAFTGDALLIRGCGRTDFQQGCAKTLYHSVHEKIFTLPGNCLIYPAHDYHGLTVSTVEEERTLNPRLTLSCEEFIKVMDNLNLPKPQQIDIAVPANMRCGVQ 250          
BLAST of CV887122 vs. ExPASy Swiss-Prot
Match: ETHE1_BOVIN (Protein ETHE1, mitochondrial OS=Bos taurus GN=ETHE1 PE=2 SV=1)

HSP 1 Score: 235.728 bits (600), Expect = 2.371e-61
Identity = 119/207 (57.49%), Postives = 143/207 (69.08%), Query Frame = -1
Query:  205 LIDPVDKTVDRDLNVIKELGLKLVYAMNTHVHADHVTGTGLIKSKVPGVXXXXXXXXXXXADLHVEHGDKVSFGDLFLEVRATPGHTLGCVTYVSGEGPDQPQPRMAFTGDALLIRGCGRTDFQGGSSSQLYKSVHSQIFTLPKDTLIYPAHDYKGFTVSTVGEEIQYNPRLTKDEETFKSIMENLNLSYPKMIDIAVPANLVCGMQ 825
            LIDPV +T  RD  ++KELGL+L+YA+NTH HADH+TG+GL++S +PG            AD H+E GD + FG   LE RA+PGHT GCVT+V  +        MAFTGDALLIRGCGRTDFQ G +  LY SVH +IFTLP + LIYPAHDY G TVSTV EE   NPRLT   E F  +M+ LNL  P+ ID AVPAN+ CG+Q
Sbjct:   50 LIDPVLETAQRDAQLVKELGLRLLYAVNTHCHADHITGSGLLRSLLPGCQSVISRLSGAQADWHIEDGDSIQFGRFALETRASPGHTPGCVTFVLNDHS------MAFTGDALLIRGCGRTDFQQGCAETLYHSVHEKIFTLPGNCLIYPAHDYHGLTVSTVEEERTLNPRLTLSCEEFVKVMDKLNLPKPQQIDFAVPANMRCGIQ 250          
BLAST of CV887122 vs. ExPASy Swiss-Prot
Match: BLH_AGRT5 (Beta-lactamase hydrolase-like protein OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=blh PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.609e-17
Identity = 74/221 (33.48%), Postives = 99/221 (44.80%), Query Frame = -1
Query:  220 DRDLNVIKELGLKLVYAMNTHVHADHVTGTGLIK----------SKVPGVXXXXXXXXXXXA--------DLHVEHGDKVSFGDLFLEVRATPGHTLGCVTYVSGEGPDQPQPRMAFTGDALLI--RGCGRTDFQGGSSSQLYKSVHSQIFTLPKDTLIYPAHDYK-----GFTVSTVGEEIQYNPRLT-KDEETFKSIME--NLNLSYPKMIDIAVPANL 798
            D  L+ +K  GL + + ++TH HADH +    +K          +KV GV                    D   E GD+ S G L   V  +PGHTL  VTYV G          AF  D L +   G  R DF GGS+ QL+ S+   I  LP DT ++  HDY+         STVGE+ + NP L    EE F  + E  +  L  PK+I  A+  N+
Sbjct:  192 DAILDYVKRHGLSVEWILDTHPHADHFSAADYLKQKTGAKTAIGAKVTGVQKLWQEKYNWSDFKTDGSQWDQLFEAGDRFSIGSLEARVLFSPGHTLASVTYVVGNA--------AFVHDTLFMPDSGTARADFPGGSAKQLWASI-QDILALPDDTRLFTGHDYQPGGRAPKWESTVGEQTRSNPHLAGMTEEDFVRLREARDRTLPMPKLILHALQVNI 403          
BLAST of CV887122 vs. ExPASy Swiss-Prot
Match: GLO2_BOVIN (Hydroxyacylglutathione hydrolase, mitochondrial OS=Bos taurus GN=HAGH PE=2 SV=3)

HSP 1 Score: 82.0333 bits (201), Expect = 4.381e-15
Identity = 46/154 (29.87%), Postives = 75/154 (48.70%), Query Frame = -1
Query:  364 LIDPVDKTVDRDLNVIKELGLKLVYAMNTHVHADHVTGTGLIKSKVPGVXXXXXXXXXXXADLHVEHGDKVSFGDLFLEVRATPGHTLGCVTYVSGEGPDQPQPRMAFTGDALLIRGCGRTDFQGGSSSQLYKSVHSQIFTLPKDTLIYPAHDY 825
            ++DPV     + +   ++ G+KL   + TH H DH  G   +    PG+               V H   +  G L ++  +TP HT G + Y   + P+ P+P   FTGD L + GCG+  F  G++ ++YK++   +  LP DT +Y  H+Y
Sbjct:   75 IVDPVQP--QKVVETARKHGVKLTTVLTTHHHWDHAGGNEKLVKLEPGLKVYGGDDRIGALTHKVTHLSTLQVGSLHVKCLSTPCHTSGHICYFVTK-PNSPEPPAVFTGDTLFVAGCGK--FYEGTADEMYKALLEVLGRLPADTRVYCGHEY 223          
BLAST of CV887122 vs. ExPASy Swiss-Prot
Match: HAGHL_HUMAN (Hydroxyacylglutathione hydrolase-like protein OS=Homo sapiens GN=HAGHL PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 4.844e-14
Identity = 45/144 (31.25%), Postives = 73/144 (50.69%), Query Frame = -1
Query:  364 RDLNVIKELGLKLVYAMNTHVHADHVTGTGLIKSKVPGVXXXXXXXXXXXADLHVEHGDKVSFGDLFLEVRATPGHTLGCVTYVSGEGPDQPQPRMAFTGDALLIRGCGRTDFQGGSSSQLYKSVHSQIFTLPKDTLIYPAHDY 795
            R L ++   G+ L   + TH H DH  G   +    PG+               + HG+++ FG + +    TPGHT G ++Y   E  D P P   F+GDAL + GCG      GS+ Q+Y+S+ +++ TLP +T ++  H++
Sbjct:   35 RLLEIVGREGVSLTAVLTTHHHWDHARGNPELARLRPGLAVLGADERIFSLTRRLAHGEELRFGAIHVRCLLTPGHTAGHMSYFLWE-DDCPDPPALFSGDALSVAGCG--SCLEGSAQQMYQSL-AELGTLPPETKVFCGHEH 174          
BLAST of CV887122 vs. ExPASy Swiss-Prot
Match: HAGHL_MOUSE (Hydroxyacylglutathione hydrolase-like protein OS=Mus musculus GN=Haghl PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 6.327e-14
Identity = 53/204 (25.98%), Postives = 87/204 (42.65%), Query Frame = -1
Query:  283 DRDLNVIKELGLKLVYAMNTHVHADHVTGTGLIKSKVPGVXXXXXXXXXXXADLHVEHGDKVSFGDLFLEVRATPGHTLGCVTYVSGEGPDQPQPRMAFTGDALLIRGCGRTDFQGGSSSQLYKSVHSQIFTLPKDTLIYPAHDYKGFTV--------------------------------STVGEEIQYNPRLTKDEETFKS 798
            +R L +    G+ L   ++TH H DH  G   +   +PG+               +EHG+ + FG + +    TPGHT G ++Y   E  D P     F+GDAL + GCG       ++ Q+Y+S+   + TLP +T ++  H++    +                                ST+GEE+ YNP L   E+  ++
Sbjct:   34 ERLLEIAGREGVSLTMVLSTHHHWDHTRGNAELAHILPGLAVLGADERICALTRRLEHGEGLQFGAIHVRCLLTPGHTSGHMSYFLWE-DDCPDSPALFSGDALSVAGCGW--HLEDTAQQMYQSLAKTLGTLPPETKVFCGHEHTLSNLEFAQKVEPCNEHVQAKLSWAQERDDEDIPTVPSTLGEELMYNPFLRVTEDAVRA 234          
BLAST of CV887122 vs. ExPASy Swiss-Prot
Match: GLO2_MOUSE (Hydroxyacylglutathione hydrolase, mitochondrial OS=Mus musculus GN=Hagh PE=2 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 1.079e-13
Identity = 45/154 (29.22%), Postives = 72/154 (46.75%), Query Frame = -1
Query:  364 LIDPVDKTVDRDLNVIKELGLKLVYAMNTHVHADHVTGTGLIKSKVPGVXXXXXXXXXXXADLHVEHGDKVSFGDLFLEVRATPGHTLGCVTYVSGEGPDQPQPRMAFTGDALLIRGCGRTDFQGGSSSQLYKSVHSQIFTLPKDTLIYPAHDY 825
            ++DPV     + +   K+  +KL   + TH H DH  G   +    PG+               V H   +  G L ++  +TP HT G + Y   + P   +P   FTGD L + GCG+  F  G++ ++YK++   +  LP DT +Y  H+Y
Sbjct:   76 IVDPVQP--QKVIEAAKKHHVKLTTVLTTHHHWDHAGGNEKLVKLEPGLKVYGGDDRIGALTHKVTHLSTLQVGSLSVKCLSTPCHTSGHICYFVSK-PGSSEPSAVFTGDTLFVAGCGK--FYEGTADEMYKALLEVLGRLPPDTKVYCGHEY 224          
BLAST of CV887122 vs. ExPASy Swiss-Prot
Match: BLH_XYLFA (Beta-lactamase hydrolase-like protein OS=Xylella fastidiosa GN=blh PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.409e-13
Identity = 65/224 (29.02%), Postives = 99/224 (44.20%), Query Frame = -1
Query:  211 DRDLNVIKELGLKLVYAMNTHVHADHVTGTGLIKSKVPG------------------VXXXXXXXXXXXADLHVEHGDKVSFGDLFLEVRATPGHTLGCVTYVSGEGPDQPQPRMAFTGDALLI--RGCGRTDFQGGSSSQLYKSVHSQIFTLPKDTLIYPAHDYKGF-----TVSTVGEEIQYNPRLT-KDEETFKSIME--NLNLSYPKMIDIAVPANLVCG 798
            D  L  +++ GL + + ++TH HADH +    +K +                                  D     GD  + G +   V  +PGHTL  VTYV G+         AF  D + +   G  R DF GGS+  L+ S+ + I +LP +T ++  HDY+         STVGE+ + NP L   DE TF ++ E  +  L  PK+I  A+  N++ G
Sbjct:  192 DAILAHVEQQGLTVEWILDTHPHADHFSAAQYLKQRTGAPTAIGTHVTEVQRLWREIYNWPTLSANGSQWDHLFADGDVFNVGSIKGRVMFSPGHTLASVTYVIGD--------TAFVHDTIFMPDAGTARADFPGGSARALWSSIQT-ILSLPDETRLFTGHDYQPSGRHPRWESTVGEQKKANPHLAGVDETTFVALREARDKTLPMPKLILHALQVNVLGG 406          
The following BLAST results are available for this feature:
BLAST of CV887122 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 54
Match NameE-valueIdentityDescription
GLO2O_ARATH7.802e-9779.81Hydroxyacylglutathione hydrolase 3, mitochondrial ... [more]
ETHE1_HUMAN8.706e-6459.72Protein ETHE1, mitochondrial OS=Homo sapiens GN=ET... [more]
ETHE1_MOUSE7.370e-6359.42Protein ETHE1, mitochondrial OS=Mus musculus GN=Et... [more]
ETHE1_BOVIN2.371e-6157.49Protein ETHE1, mitochondrial OS=Bos taurus GN=ETHE... [more]
BLH_AGRT51.609e-1733.48Beta-lactamase hydrolase-like protein OS=Agrobacte... [more]
GLO2_BOVIN4.381e-1529.87Hydroxyacylglutathione hydrolase, mitochondrial OS... [more]
HAGHL_HUMAN4.844e-1431.25Hydroxyacylglutathione hydrolase-like protein OS=H... [more]
HAGHL_MOUSE6.327e-1425.98Hydroxyacylglutathione hydrolase-like protein OS=M... [more]
GLO2_MOUSE1.079e-1329.22Hydroxyacylglutathione hydrolase, mitochondrial OS... [more]
BLH_XYLFA1.409e-1329.02Beta-lactamase hydrolase-like protein OS=Xylella f... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_029C07_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_029_T7_C07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV887122 ID=CV887122; Name=CV887122; organism=Citrus sinensis; type=EST; length=825bp
TATTCATTATATCTTATTTTCATCATTTCACTGATCCATACATTATGTAG
GTGCTTAACAACTTTTTCTTTGTTATTGTTTTGTATTATCCCAATTAAGA
GCCATTGTATATCATTTGTACAGAGTAACTTGAACAGCAGGTACCGAGGT
TATCACCATTTGGGCGTCGCCCAAGGAAGCTCATCAGGCTTTGGAGGTCA
GATCTTGCATTCCACAAACCAAATTTGCCGGAACTGCTATGTCTATCATC
TTTGGATATGACAGGTTTAAATTTTCCATTATGGATTTGAATGTTTCCTC
ATCTTTCGTTAGGCGAGGATTGTACTGAATCTCCTCTCCCACTGTGCTTA
CTGTGAATCCCTTGTAATCATGAGCCGGGTAGATTAATGTGTCCTTCGGC
AAAGTAAATATCTGTGAATGCACTGACTTGTAGAGCTGACTTGAACTTCC
ACCCTGAAAATCAGTCCTCCCGCATCCACGTATCAGTAAGGCATCTCCAG
TGAATGCCATCCTTGGTTGAGGCTGATCAGGTCCTTCACCAGAAACATAG
GTAACACAACCCAACGTATGGCCAGGAGTAGCACGAACCTCAAGGAAGAG
ATCACCGAAAGAGACTTTATCCCCATGTTCAACATGAAGATCAGCCTTGG
AACCACTTGCTTTTGATATAATAGATTTCACTCCCGGAACCTTACTCTTA
ATGAGACCCGTTCCAGTGACATGATCAGCATGTACATGGGTGTTCATGGC
ATATACAAGCTTCAATCCCAGTTCTTTAATAACATTCAGGTCTCTATCAA
CGGTCTTGTCGACAGGGTCAATCAA
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