CV887120
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV887120 vs. ExPASy Swiss-Prot
Match: RK15_ARATH (50S ribosomal protein L15, chloroplastic OS=Arabidopsis thaliana GN=RPL15 PE=1 SV=2) HSP 1 Score: 296.204 bits (757), Expect = 1.404e-79 Identity = 147/179 (82.12%), Postives = 158/179 (88.27%), Query Frame = -3 Query: 267 NNLGPQPGSXXXXXXXXXGIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVLPGRKKWVKPSVAKNLARAEEYFAKKR 803 +NLGPQPGS GI+AGQG SCGFGMRGQKSRSGPG+ +GFEGGQ LYRR+PKLRGIAGGM +GLPKY+PVN+KDIE AGF EGDEVSLETLK+KGLINPSGRERKLPLKILG GELS KL FKARAFST AKEKLEA+GCTLTVLPGRKKWVKPSVAKN ARA+EYFAKKR Sbjct: 84 DNLGPQPGSRKKQKRKGRGISAGQGASCGFGMRGQKSRSGPGIMRGFEGGQTALYRRLPKLRGIAGGMRSGLPKYLPVNIKDIETAGFQEGDEVSLETLKQKGLINPSGRERKLPLKILGTGELSMKLTFKARAFSTQAKEKLEASGCTLTVLPGRKKWVKPSVAKNQARADEYFAKKR 262
BLAST of CV887120 vs. ExPASy Swiss-Prot
Match: RK15_PEA (50S ribosomal protein L15, chloroplastic (Fragment) OS=Pisum sativum GN=RPL15 PE=1 SV=1) HSP 1 Score: 292.352 bits (747), Expect = 2.028e-78 Identity = 148/179 (82.68%), Postives = 156/179 (87.15%), Query Frame = -3 Query: 267 NNLGPQPGSXXXXXXXXXGIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVLPGRKKWVKPSVAKNLARAEEYFAKKR 803 +NLGPQPGS GIAAGQG SCGFGMRGQKSRSGPG+ +GFEGGQMPLYRR+PKLRGIAGGMHAGLPKYV VNL DIE AGF +G+EVSLETLK K +INPSGRERKLPLKIL DGELSKKL KA AFSTSAKEKLE AGC+L VLPGRKKWVKPSVAKNLARAEEYFAKKR Sbjct: 69 DNLGPQPGSRKRPKRKGRGIAAGQGASCGFGMRGQKSRSGPGIMRGFEGGQMPLYRRLPKLRGIAGGMHAGLPKYVNVNLTDIENAGFQDGEEVSLETLKAKRVINPSGRERKLPLKILADGELSKKLTIKAGAFSTSAKEKLEYAGCSLIVLPGRKKWVKPSVAKNLARAEEYFAKKR 247
BLAST of CV887120 vs. ExPASy Swiss-Prot
Match: RL15_SYNP6 (50S ribosomal protein L15 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=rplO PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.333e-29 Identity = 78/156 (50.00%), Postives = 99/156 (63.46%), Query Frame = -3 Query: 345 NNLGPQPGSXXXXXXXXXGIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPK---YVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 803 +NL PQPG+ GIAAGQG SCGFGMRGQKSRSG R GFEGGQMPLYRR+PKL+ H L Y VN+ + AG G EV+LE+L G++ + PLKILGDGELS L+ A AF+ +A++K+EAAG ++ ++ Sbjct: 4 DNLAPQPGAKKRKRRVGRGIAAGQGASCGFGMRGQKSRSGRPTRPGFEGGQMPLYRRVPKLK------HFPLINRKFYTVVNVGAL--AGLAAGTEVTLESLMAVGIVT----QNDGPLKILGDGELSVSLSVSAAAFTATAQQKIEAAGGSIALV 147
BLAST of CV887120 vs. ExPASy Swiss-Prot
Match: RL15_SYNE7 (50S ribosomal protein L15 OS=Synechococcus elongatus (strain PCC 7942) GN=rplO PE=3 SV=2) HSP 1 Score: 130.183 bits (326), Expect = 1.333e-29 Identity = 78/156 (50.00%), Postives = 99/156 (63.46%), Query Frame = -3 Query: 345 NNLGPQPGSXXXXXXXXXGIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPK---YVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 803 +NL PQPG+ GIAAGQG SCGFGMRGQKSRSG R GFEGGQMPLYRR+PKL+ H L Y VN+ + AG G EV+LE+L G++ + PLKILGDGELS L+ A AF+ +A++K+EAAG ++ ++ Sbjct: 4 DNLAPQPGAKKRKRRVGRGIAAGQGASCGFGMRGQKSRSGRPTRPGFEGGQMPLYRRVPKLK------HFPLINRKFYTVVNVGAL--AGLAAGTEVTLESLMAVGIVT----QNDGPLKILGDGELSVSLSVSAAAFTATAQQKIEAAGGSIALV 147
BLAST of CV887120 vs. ExPASy Swiss-Prot
Match: RL15_MICAN (50S ribosomal protein L15 OS=Microcystis aeruginosa (strain NIES-843) GN=rplO PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.629e-27 Identity = 72/146 (49.32%), Postives = 90/146 (61.64%), Query Frame = -3 Query: 366 NNLGPQPGSXXXXXXXXXGIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAA 803 + + PQPGS G++AGQG SCG GMRGQKSRSG G R GFEGGQMPLYRR+PKL+ +Y VNL+ + A EV+LE+L K ++ + PLK+LGDGE++ L KA AFS SAKEK+ AA Sbjct: 4 HEIAPQPGSTKRRRRVGRGVSAGQGASCGLGMRGQKSRSGTGTRPGFEGGQMPLYRRVPKLKHFP---LVNPRQYTIVNLRKL--ASLPANTEVTLESLLKAKILTSNDG----PLKVLGDGEITVPLKVKAAAFSNSAKEKITAA 140
BLAST of CV887120 vs. ExPASy Swiss-Prot
Match: RL15_CYAP7 (50S ribosomal protein L15 OS=Cyanothece sp. (strain PCC 7424) GN=rplO PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.629e-27 Identity = 75/152 (49.34%), Postives = 92/152 (60.53%), Query Frame = -3 Query: 348 NNLGPQPGSXXXXXXXXXGIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTV 803 + L PQ G+ GI+AGQG SCGFGMRGQKSRSG G + GFEGGQMPLYRRIPKL+ +Y +N+ + A EV+LETL GLI + PLKILG+GEL+ L KA AF+ A+EK+EAAG + V Sbjct: 4 HELAPQKGATKRRRRVGRGISAGQGASCGFGMRGQKSRSGTGTKPGFEGGQMPLYRRIPKLKHFP---LVNRRQYTIINVGQL--ASLDPNSEVTLETLMDAGLITTNDG----PLKILGNGELTIPLTIKAAAFTKGAQEKIEAAGGSCVV 146
BLAST of CV887120 vs. ExPASy Swiss-Prot
Match: RL15_CYAP8 (50S ribosomal protein L15 OS=Cyanothece sp. (strain PCC 8801) GN=rplO PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.779e-27 Identity = 77/152 (50.66%), Postives = 96/152 (63.16%), Query Frame = -3 Query: 345 PQPGSXXXXXXXXXGIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGL--PK-YVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 791 P+ GS GI+AGQG SCGFGMRGQKSRSG G + GFEGGQMPLYRRIPKL+ H L PK Y +N+ +E+ EV+LE+L ++G+I + PLK+LGDG L+K L KA AFS SA+EK+ A G + VL Sbjct: 8 PKEGSTKRRRRVGRGISAGQGASCGFGMRGQKSRSGTGTKAGFEGGQMPLYRRIPKLK------HFPLVNPKHYTIINVGKLES--LEPNTEVTLESLMEQGIITTNDG----PLKVLGDGTLTKALTVKAAAFSKSAQEKIAATGGSWEVL 147
BLAST of CV887120 vs. ExPASy Swiss-Prot
Match: RL15_SYNS3 (50S ribosomal protein L15 OS=Synechococcus sp. (strain CC9311) GN=rplO PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 4.740e-27 Identity = 74/153 (48.37%), Postives = 93/153 (60.78%), Query Frame = -3 Query: 345 NLGPQPGSXXXXXXXXXGIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLE-GDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 800 +L P G+ GIAAGQG SCGFGMRGQKSRSG R GFEGGQMPLYRR+PKL+ H L + ++ A ++ G V+L++L K G++ K PLKILG+GEL KL +A AF+ SA+ K+EAAG T VL Sbjct: 7 SLKPNKGARRRKLRKGRGIAAGQGASCGFGMRGQKSRSGRPTRPGFEGGQMPLYRRVPKLK------HFTLVNPKSFTVLNVSALNEIKAGSTVNLDSLVKDGIVT----SPKSPLKILGNGELKAKLTVQAAAFTASARAKIEAAGGTCEVL 149
BLAST of CV887120 vs. ExPASy Swiss-Prot
Match: RL15_SYNP2 (50S ribosomal protein L15 OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=rplO PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 6.191e-27 Identity = 73/147 (49.66%), Postives = 86/147 (58.50%), Query Frame = -3 Query: 363 NNLGPQPGSXXXXXXXXXGIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 803 +NL P+ GS GIAAGQG SCGFGMRGQKSRSG G + GFEGGQMPLYRR+PKL+ L D+ A EV+LE+L G++ + PLK+LGDGELS L A AFS AK K+EAAG Sbjct: 4 SNLSPKAGSKKRRRRVGRGIAAGQGASCGFGMRGQKSRSGTGTKAGFEGGQMPLYRRVPKLKHFTIVNPKNFTIVNVGQLTDLPA-----NTEVTLESLMAAGIVTTNDG----PLKVLGDGELSVALKVTAAAFSNGAKAKIEAAG 141
BLAST of CV887120 vs. ExPASy Swiss-Prot
Match: RL15_PROM2 (50S ribosomal protein L15 OS=Prochlorococcus marinus (strain MIT 9215) GN=rplO PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 8.086e-27 Identity = 72/147 (48.98%), Postives = 92/147 (62.59%), Query Frame = -3 Query: 363 NNLGPQPGSXXXXXXXXXGIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 803 N L GS GIAAGQG SCGFGMRGQKSRSG R GFEGGQMPLYRR+PKL+ + +NL+ + F + D V++++L KKGLI + K PLKILG+G+++ KL +A AF+ AK+K+EAAG Sbjct: 6 NTLKSNSGSRKKKLRKGRGIAAGQGASCGFGMRGQKSRSGRPTRPGFEGGQMPLYRRVPKLKHFE---IINQKNFSIINLEKLN--DFKDNDTVNIDSLVKKGLI----FKPKFPLKILGNGKINVKLKVQAHAFTKVAKQKIEAAG 143 The following BLAST results are available for this feature:
BLAST of CV887120 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CV887120 ID=CV887120; Name=CV887120; organism=Citrus sinensis; type=EST; length=805bpback to top |