CV887109

Overview
NameCV887109
Unique NameCV887109
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length691
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV887109 vs. ExPASy Swiss-Prot
Match: E13A_SOYBN (Glucan endo-1,3-beta-glucosidase OS=Glycine max PE=1 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 2.193e-56
Identity = 120/227 (52.86%), Postives = 152/227 (66.96%), Query Frame = 3
Query:   15 MAKFFNSPNAPSMASVIILLLGMLIATLDTTSAQIGVCYGMHGDNLPSKSDVIALYNQNNIRRMRLYDPNKEALEALRGSNIEVMLGVPNDFDLLRRIASNQAEANTWXXXXXXXXXXXXXXXYIAVGNEPKPGDDFAQYLVPAMRNIQNAINGANLGSQIKVSTAIAFGALDKSSPPSAGSFNQDYR-PILDPLITFLNEXNSPLLVNLYPYFAIVGD-RQISLDY 689
            MAK+ +S  + SM ++  L + +LI    TT AQ GVCYG  G+NLP+  +V+ALYNQ NIRRMR+Y P+ E LEALRGSNIE++L +PN  D LR +AS+Q  AN W               Y++VGNE KP   FAQ+LVPA+ NIQ AI+ A LG+Q+KVSTAI  GAL +S PPS GSF  DYR   LD +I FL   N+PL+VN+Y YFA   + + ISLDY
Sbjct:    1 MAKYHSSGKSSSMTAIAFLFI-LLITYTGTTDAQSGVCYGRLGNNLPTPQEVVALYNQANIRRMRIYGPSPEVLEALRGSNIELLLDIPN--DNLRNLASSQDNANKWVQDNIKNYANNVRFRYVSVGNEVKPEHSFAQFLVPALENIQRAISNAGLGNQVKVSTAIDTGALAESFPPSKGSFKSDYRGAYLDGVIRFLVNNNAPLMVNVYSYFAYTANPKDISLDY 224          
BLAST of CV887109 vs. ExPASy Swiss-Prot
Match: E13B_PRUPE (Glucan endo-1,3-beta-glucosidase, basic isoform OS=Prunus persica GN=GNS1 PE=3 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 3.166e-55
Identity = 123/214 (57.48%), Postives = 145/214 (67.76%), Query Frame = 3
Query:   63 IILLLGMLI----ATLDTTSAQIGVCYGMHGDNLPSKSDVIALYNQNNIRRMRLYDPNKEALEALRGSNIEVMLGVPNDFDLLRRIASNQAEANTWXXXXXXXXXXXXXXXYIAVGNEPKPGDDFAQYLVPAMRNIQNAINGANLGSQIKVSTAIAFGALDKSSPPSAGSFNQDYRPILDPLITFLNEXNSPLLVNLYPYFAIVGDRQ-ISLDY 689
            I+LLLG L+    AT   T A IGVC GM GD+LP +++V+ALY  NNI RMRLYDPN  ALEALRGSNI+++LGVPN+   L+ IA +QA AN W               YIAVGNE KP D FAQ+LVPAMRNIQ AI+ A L  +IKVSTAI  G L ++ PPS GSF  +Y  +L P+I FL    SPLLVNLYPYFA  G+ Q I LDY
Sbjct:   18 IVLLLGQLVVGSLATKQHTGAPIGVCNGMVGDDLPPQAEVVALYKTNNIPRMRLYDPNPAALEALRGSNIKLLLGVPNEN--LQYIALSQANANAWVQNNVRNYANVKFK-YIAVGNEVKPSDSFAQFLVPAMRNIQEAISLAGLAKKIKVSTAIDTGVLGETFPPSIGSFKSEYNALLYPIIRFLVSHQSPLLVNLYPYFAYSGNTQDIRLDY 228          
BLAST of CV887109 vs. ExPASy Swiss-Prot
Match: E13H_TOBAC (Glucan endo-1,3-beta-glucosidase, acidic isoform PR-Q' OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 2.269e-53
Identity = 116/214 (54.21%), Postives = 146/214 (68.22%), Query Frame = 3
Query:   60 VIILLLGML-IATLDTTSAQIGVCYGMHGDNLPSKSDVIALYNQNNIRRMRLYDPNKEALEALRGSNIEVMLGVPNDFDLLRRIASNQAEANTWXXXXXXXXXXXXXXXYIAVGNEPKPGDDFAQY---LVPAMRNIQNAINGANLGSQIKVSTAIAFGALDKSSPPSAGSFNQDYRPILDPLITFLNEXNSPLLVNLYPYFAIVGDRQISLDY 689
            V +LLL +L +ATLD T AQ GVCYG  G+ LPS +DV++L N+NNIRRMR+YDP++  LEALRGSNIE+MLGVPN    L  +A++QA A+TW               YIAVGNE  P ++ ++Y   L+ AMRNIQ AI+GA LG+QIKVSTAI  G    +SPPS G F  D R  ++P+I FL    +PLLVNLYPYFAI  +  I L+Y
Sbjct:    6 VTLLLLSVLTLATLDFTGAQAGVCYGRQGNGLPSPADVVSLCNRNNIRRMRIYDPDQPTLEALRGSNIELMLGVPNPD--LENVAASQANADTW-VQNNVRNYGNVKFRYIAVGNEVSPLNENSKYVPVLLNAMRNIQTAISGAGLGNQIKVSTAIETGLTTDTSPPSNGRFKDDVRQFIEPIINFLVTNRAPLLVNLYPYFAIANNADIKLEY 216          
BLAST of CV887109 vs. ExPASy Swiss-Prot
Match: GUB_NICPL (Lichenase OS=Nicotiana plumbaginifolia GN=GN1 PE=2 SV=3)

HSP 1 Score: 206.068 bits (523), Expect = 1.471e-52
Identity = 111/213 (52.11%), Postives = 140/213 (65.73%), Query Frame = 3
Query:   66 ILLLGMLIATLDTTSAQ-IGVCYGMHGDNLPSKSDVIALYNQNNIRRMRLYDPNKEALEALRGSNIEVMLGVPNDFDLLRRIASNQAEANTWXXXXXXXXXXXXXXXYIAVGNEPKP---GDDFAQYLVPAMRNIQNAINGANLGSQIKVSTAIAFGALDKSSPPSAGSFNQDYRPILDPLITFLNEXNSPLLVNLYPYFAIVGD-RQISLDY 689
            I+LLG+L+++ +   AQ +GVCYGM G+NLP  S V+ LY   NIRRMRLYDPN+ AL+ALRGSNIEVMLGVPN    L+ IA+N + AN W               YIAVGNE  P        +YL+PAMRNI+NAI+ A L + IKVS+++    +  S PPS GSF  D R  +DP+I F+   NSPLLVN+YPYF+  G+ R ISL Y
Sbjct:   15 IILLGLLVSSTEIVGAQSVGVCYGMLGNNLPPASQVVQLYKSKNIRRMRLYDPNQAALQALRGSNIEVMLGVPNSD--LQNIAANPSNANNWVQRNVRNFWPAVKFRYIAVGNEVSPVTGTSSLTRYLLPAMRNIRNAISSAGLQNNIKVSSSVDMTLIGNSFPPSQGSFRNDVRSFIDPIIGFVRRINSPLLVNIYPYFSYAGNPRDISLPY 225          
BLAST of CV887109 vs. ExPASy Swiss-Prot
Match: E13B_HEVBR (Glucan endo-1,3-beta-glucosidase, basic vacuolar isoform OS=Hevea brasiliensis GN=HGN1 PE=1 SV=2)

HSP 1 Score: 195.282 bits (495), Expect = 2.596e-49
Identity = 112/224 (50.00%), Postives = 141/224 (62.95%), Query Frame = 3
Query:   33 SPNAPSMASVIILLLGMLIATLDTTSAQIGVCYGMHGDNLPSKSDVIALYNQNNIRRMRLYDPNKEALEALRGSNIEVMLGVPNDFDLLRRIASNQAEANTWXXXXXXXXXXXXXXXYIAVGNEPKPGDD----FAQYLVPAMRNIQNAINGANLGSQIKVSTAIAFGALDKSSPPSAGSFNQDYRPILDPLITFLNEXNSPLLVNLYPYFAIV-GDRQISLDY 689
            S + PS  +V++LL     A++  T AQ+GVCYGM G+NLP  S+VIALY ++NI RMR+YDPN+  LEALRGSNIE++LGVPN  DL  +  +N + A +W               YIAVGNE  P +      AQ+++PAMRNI +AI  A L  QIKVSTAI    +  S PPSAG+F  D R  LDP+I FL+   SPLL N+YPYF      R ISL Y
Sbjct:   11 SSSFPSRTTVMLLLF-FFAASVGITDAQVGVCYGMQGNNLPPVSEVIALYKKSNITRMRIYDPNRAVLEALRGSNIELILGVPNS-DL--QSLTNPSNAKSWVQKNVRGFWSSVLFRYIAVGNEISPVNRGTAWLAQFVLPAMRNIHDAIRSAGLQDQIKVSTAIDLTLVGNSYPPSAGAFRDDVRSYLDPIIGFLSSIRSPLLANIYPYFTYAYNPRDISLPY 230          
BLAST of CV887109 vs. ExPASy Swiss-Prot
Match: E13B_SOLLC (Glucan endo-1,3-beta-glucosidase B OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 6.395e-48
Identity = 109/214 (50.93%), Postives = 135/214 (63.08%), Query Frame = 3
Query:   63 IILLLGMLIAT-LDTTSAQIGVCYGMHGDNLPSKSDVIALYNQNNIRRMRLYDPNKEALEALRGSNIEVMLGVPNDFDLLRRIASNQAEANTWXXXXXXXXXXXXXXXYIAVGNEPKP---GDDFAQYLVPAMRNIQNAINGANLGSQIKVSTAIAFGALDKSSPPSAGSFNQDYRPILDPLITFLNEXNSPLLVNLYPYFAIVGD-RQISLDY 689
            II+LLG+L+AT +  T AQIGVCYGM G+NLPS S+VI LY   NIRR+RLYDPN  AL ALRGSNIEV+LG+PN    ++ I+S    A  W               YIAVGNE  P     + A + VPA+ NI  AI  A LG+ IKVST++    +  S PPS GSF  D R   DP++ FL +  +PLLVN+YPYF+  G+  QISL Y
Sbjct:    8 IIVLLGLLVATNIHITEAQIGVCYGMMGNNLPSHSEVIQLYKSRNIRRLRLYDPNHGALNALRGSNIEVILGLPNVD--VKHISSGMEHARWWVQKNVRDFWPHVKIKYIAVGNEISPVTGTSNLAPFQVPALVNIYKAIGEAGLGNDIKVSTSVDMTLIGNSYPPSQGSFRNDVRWFTDPIVGFLRDTRAPLLVNIYPYFSYSGNPGQISLPY 219          
BLAST of CV887109 vs. ExPASy Swiss-Prot
Match: E13B_PEA (Glucan endo-1,3-beta-glucosidase OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 6.395e-48
Identity = 110/229 (48.03%), Postives = 138/229 (60.26%), Query Frame = 3
Query:   15 MAKFFNSPNAPSMASVIILLLGMLIATLDTTSAQIGVCYGMHGDNLPSKSDVIALYNQNNIRRMRLYDPNKEALEALRGSNIEVMLGVPNDFDLLRRIASNQAEANTWXXXXXXXXXXXXXXXYIAVGNEPKP---GDDFAQYLVPAMRNIQNAINGANLGSQIKVSTAIAFGALDKSSPPSAGSFNQDYRPILDPLITFLNEXNSPLLVNLYPYFAIVGD-RQISLDY 689
            MA FF      S+ S+ +L L   I  + TT AQIG+CYGM G+NLP  ++VIALY  NNI+RMRLYDPN+ AL ALR S IE++LG+PN    L+ +A+NQ  A  W               YIAVGNE  P       AQY++PA +N+  AI    L  QIKV+TAI    +  S PPS GSF  D R  LDP I +L    +PLLVN+YPYF+ +G+ R ISL Y
Sbjct:    1 MASFFARTRRFSLVSLFLLEL-FTINLIPTTDAQIGICYGMMGNNLPPANEVIALYKANNIKRMRLYDPNQPALNALRDSGIELILGIPNSD--LQTLATNQDSARQWVQRNVLNFYPSVKIKYIAVGNEVSPVGGSSWLAQYVLPATQNVYQAIRAQGLHDQIKVTTAIDMTLIGNSFPPSKGSFRSDVRSYLDPFIGYLVYAGAPLLVNVYPYFSHIGNPRDISLPY 226          
BLAST of CV887109 vs. ExPASy Swiss-Prot
Match: E13A_ARATH (Glucan endo-1,3-beta-glucosidase, acidic isoform OS=Arabidopsis thaliana GN=BG2 PE=1 SV=2)

HSP 1 Score: 189.889 bits (481), Expect = 1.091e-47
Identity = 110/218 (50.46%), Postives = 145/218 (66.51%), Query Frame = 3
Query:   48 SMAS--VIILLLGMLIATL-DTTSAQIGVCYGMHGDNLPSKSDVIALYNQNNIRRMRLYDPNKEALEALRGSNIEVMLGVPNDFDLLRRIASNQAEANTWXXXXXXXXXXXXXXXYIAVGNEPKPGDDFAQYLVPAMRNIQNAINGANLGSQIKVSTAIAFGALDKSSPPSAGSFNQDYRPILDPLITFLNEXNSPLLVNLYPYFAIVGD-RQISLDY 689
            S+AS  ++++LL ++IA+  + T+ QIGVCYGM GD LPS SDV+ALY Q NI+RMRLY P+  AL ALRGS+IE++L VP+    L R+AS+Q EA+ W               YI VGNE KP      +L+ AM+NI+NA++GA  G ++KVSTAIA      +SPPS G F  +Y+  L+P+I FL    SPLLVNLYPYF+ +GD   I LDY
Sbjct:    6 SLASPPMLMILLSLVIASFFNHTAGQIGVCYGMLGDTLPSPSDVVALYKQQNIQRMRLYGPDPGALAALRGSDIELILDVPSSD--LERLASSQTEADKWVQENVQSYRDGVRFRYINVGNEVKP--SVGGFLLQAMQNIENAVSGA--GLEVKVSTAIATDTTTDTSPPSQGRFRDEYKSFLEPVIGFLASKQSPLLVNLYPYFSYMGDTANIHLDY 217          
BLAST of CV887109 vs. ExPASy Swiss-Prot
Match: E132_SOLTU (Glucan endo-1,3-beta-glucosidase, basic isoform 2 OS=Solanum tuberosum GN=GLUB2 PE=2 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 9.234e-47
Identity = 105/214 (49.07%), Postives = 133/214 (62.15%), Query Frame = 3
Query:   63 IILLLGMLIAT-LDTTSAQIGVCYGMHGDNLPSKSDVIALYNQNNIRRMRLYDPNKEALEALRGSNIEVMLGVPNDFDLLRRIASNQAEANTWXXXXXXXXXXXXXXXYIAVGNEPKP---GDDFAQYLVPAMRNIQNAINGANLGSQIKVSTAIAFGALDKSSPPSAGSFNQDYRPILDPLITFLNEXNSPLLVNLYPYFAIVGD-RQISLDY 689
            +I+LLG+L+AT +  T AQ+GVCYGM G+NLPS S+VI LY   NI R+RLYDPN+ AL ALRGSNIEV+LG+PN    ++ IAS    A  W               YIAVGNE  P         + VPA+ NI  A+  A LG+ IKVST++    +  S PPS GSF  D R   DP++ FL +  +PLLVN+YPYF+  G+  QISL Y
Sbjct:    8 VIVLLGLLVATNIHITEAQLGVCYGMMGNNLPSHSEVIQLYKSRNIGRLRLYDPNQGALNALRGSNIEVILGLPNVD--VKHIASGMEHARWWVQKNVKDFWPDVKIKYIAVGNEISPVTGTSSLTSFQVPALVNIYKAVGEAGLGNDIKVSTSVDMTLIGNSYPPSQGSFRNDVRWFTDPIVGFLRDTRAPLLVNIYPYFSYSGNPGQISLPY 219          
BLAST of CV887109 vs. ExPASy Swiss-Prot
Match: E13F_TOBAC (Glucan endo-1,3-beta-glucosidase, basic vacuolar isoform GLB OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 7.817e-46
Identity = 106/222 (47.75%), Postives = 136/222 (61.26%), Query Frame = 3
Query:   39 NAPSMASVIILLLGMLIATLDTTSAQ-IGVCYGMHGDNLPSKSDVIALYNQNNIRRMRLYDPNKEALEALRGSNIEVMLGVPNDFDLLRRIASNQAEANTWXXXXXXXXXXXXXXXYIAVGNE--PKPGDDF-AQYLVPAMRNIQNAINGANLGSQIKVSTAIAFGALDKSSPPSAGSFNQDYRPILDPLITFLNEXNSPLLVNLYPYFAIVGD-RQISLDY 689
            N P MA++ +L L ++ +T++   AQ IGVCYGM G+NLP+  +VI LY   NI R+RLYDPN  AL+AL+GSNIEVMLG+PN    ++ IAS    A  W               YIAVGNE  P  G  +   +L PAM NI  AI  A LG+ IKVST++    +  S PPS GSF  D R   DP++ FL +  +PLLVN+YPYF+  G+  QISL Y
Sbjct:    8 NTPQMAAITLLGLLLVASTIEIAGAQSIGVCYGMLGNNLPNHWEVIQLYKSRNIGRLRLYDPNHGALQALKGSNIEVMLGLPNSD--VKHIASGMEHARWWVQKNVKDFWPDVKIKYIAVGNEISPVTGTSYLTSFLTPAMVNIYKAIGEAGLGNNIKVSTSVDMTLIGNSYPPSQGSFRNDARWFTDPIVGFLRDTRAPLLVNIYPYFSYSGNPGQISLPY 227          
The following BLAST results are available for this feature:
BLAST of CV887109 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
E13A_SOYBN2.193e-5652.86Glucan endo-1,3-beta-glucosidase OS=Glycine max PE... [more]
E13B_PRUPE3.166e-5557.48Glucan endo-1,3-beta-glucosidase, basic isoform OS... [more]
E13H_TOBAC2.269e-5354.21Glucan endo-1,3-beta-glucosidase, acidic isoform P... [more]
GUB_NICPL1.471e-5252.11Lichenase OS=Nicotiana plumbaginifolia GN=GN1 PE=2... [more]
E13B_HEVBR2.596e-4950.00Glucan endo-1,3-beta-glucosidase, basic vacuolar i... [more]
E13B_SOLLC6.395e-4850.93Glucan endo-1,3-beta-glucosidase B OS=Solanum lyco... [more]
E13B_PEA6.395e-4848.03Glucan endo-1,3-beta-glucosidase OS=Pisum sativum ... [more]
E13A_ARATH1.091e-4750.46Glucan endo-1,3-beta-glucosidase, acidic isoform O... [more]
E132_SOLTU9.234e-4749.07Glucan endo-1,3-beta-glucosidase, basic isoform 2 ... [more]
E13F_TOBAC7.817e-4647.75Glucan endo-1,3-beta-glucosidase, basic vacuolar i... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_029B10_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_029_T3_B10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV887109 ID=CV887109; Name=CV887109; organism=Citrus sinensis; type=EST; length=691bp
ATTTTTCTCCACGCATGGCTAAATTCTTTAACTCTCCCAATGCCCCTTCA
ATGGCTTCCGTGATCATCTTACTTCTGGGGATGCTAATCGCTACCCTGGA
CACAACAAGTGCTCAAATAGGTGTTTGTTATGGAATGCATGGTGACAACT
TACCATCAAAATCAGATGTAATAGCTCTCTACAACCAAAATAACATCAGA
AGAATGAGACTCTATGATCCAAACAAAGAAGCTCTCGAAGCTCTCCGTGG
CTCCAACATTGAAGTCATGCTGGGCGTTCCCAACGATTTTGACCTCCTCC
GAAGAATCGCTTCCAATCAAGCCGAAGCAAATACCTGGGTCCAAGACAAC
GTCCAAAATTTTGTTAACAATGTCAAGTTCAAATATATTGCCGTAGGAAA
TGAACCAAAACCAGGAGACGACTTTGCGCAGTATCTTGTACCCGCCATGA
GAAACATACAAAACGCCATTAACGGAGCTAACCTTGGAAGCCAAATCAAA
GTTTCCACAGCCATTGCATTCGGAGCTCTTGATAAATCCTCTCCGCCGTC
AGCTGGCTCCTTTAATCAAGATTACAGACCAATTCTCGATCCCCTCATTA
CCTTCCTTAACGAANACAATTCCCCGTTGCTTGTTAACTTGTACCCTTAC
TTTGCCATCGTTGGTGACCGTCAAATATCTCTTGATTATGC
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