CV887103
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV887103 vs. ExPASy Swiss-Prot
Match: GLGS2_VICFA (Glucose-1-phosphate adenylyltransferase small subunit 2, chloroplastic OS=Vicia faba GN=AGPP PE=2 SV=1) HSP 1 Score: 415.616 bits (1067), Expect = 1.748e-115 Identity = 206/233 (88.41%), Postives = 219/233 (93.99%), Query Frame = 3 Query: 156 VVKRLAFSSSQLSGDKIFSKAVTGDRRRERRPIVVSPQAVSDSKNSQTCLDPEASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDHLYRMDYERFIQAHRETDADITVAALPMDEKRATAFGLMKIDEKGRIIEFS 854 + + L+F+SS LSGDKIF+ + R R P +VSP+AVSDSKNSQTCLDP+ASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASN+GGYKNEGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLE+LVLAGDHLYRMDYERFIQAHRE+DADITVAALPMDE RATAFGLMKIDE+GRIIEFS Sbjct: 25 IARNLSFTSSHLSGDKIFTLSGRTRRTSGRNPFIVSPKAVSDSKNSQTCLDPDASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNLGGYKNEGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEYLVLAGDHLYRMDYERFIQAHRESDADITVAALPMDEARATAFGLMKIDEEGRIIEFS 257
BLAST of CV887103 vs. ExPASy Swiss-Prot
Match: GLGS_BETVU (Glucose-1-phosphate adenylyltransferase small subunit, chloroplastic/amyloplastic (Fragment) OS=Beta vulgaris GN=AGPB1 PE=2 SV=1) HSP 1 Score: 415.231 bits (1066), Expect = 2.283e-115 Identity = 210/232 (90.52%), Postives = 218/232 (93.97%), Query Frame = 3 Query: 168 LAFSSSQLSGDKIFSKAVTGDRR---RERRPIVVSPQAVSDSKNSQTCLDPEASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDHLYRMDYERFIQAHRETDADITVAALPMDEKRATAFGLMKIDEKGRIIEFS 854 LAFSSS LSGDKI + + R R PIVVSP+AVSDSKNSQTCLDPEASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLE+L+LAGDHLYRMDYERF+QAHRETDADITVAALPMDEKRATAFGLMKIDE+GRIIEF+ Sbjct: 15 LAFSSSSLSGDKIQTTSFLNRRYCRISSRAPIVVSPKAVSDSKNSQTCLDPEASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEYLILAGDHLYRMDYERFVQAHRETDADITVAALPMDEKRATAFGLMKIDEEGRIIEFA 246
BLAST of CV887103 vs. ExPASy Swiss-Prot
Match: GLGS_BRANA (Glucose-1-phosphate adenylyltransferase small subunit, chloroplastic OS=Brassica napus GN=AGPS1 PE=2 SV=1) HSP 1 Score: 412.149 bits (1058), Expect = 1.933e-114 Identity = 217/272 (79.78%), Postives = 231/272 (84.93%), Query Frame = 3 Query: 60 MASMASIGSLKVXXXXXXXXXXXXXXXXXXXXVVKRLAFSSSQLSGDK-------IFSKAVTGDRRRERRPIVVSPQAVSDSKNSQTCLDPEASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDHLYRMDYERFIQAHRETDADITVAALPMDEKRATAFGLMKIDEKGRIIEFS 854 MA+MA+IGSLKV K L+FSSS L+G+K I S G+ RR P +VSP+AVSDS+NSQTCLDP+ASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDHLYRMDYE+FIQAHRETDADITVAALPMDEKRATAFGLMKID++GRIIEF+ Sbjct: 1 MATMAAIGSLKVPSSSSNHTRRLSSSSQR-----KTLSFSSSSLTGEKLNPTQEIIISNLPRGNERRT--PSIVSPKAVSDSQNSQTCLDPDASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDHLYRMDYEKFIQAHRETDADITVAALPMDEKRATAFGLMKIDDEGRIIEFA 265
BLAST of CV887103 vs. ExPASy Swiss-Prot
Match: GLGS_SOLTU (Glucose-1-phosphate adenylyltransferase small subunit, chloroplastic/amyloplastic OS=Solanum tuberosum PE=1 SV=2) HSP 1 Score: 403.29 bits (1035), Expect = 8.977e-112 Identity = 204/235 (86.81%), Postives = 219/235 (93.19%), Query Frame = 3 Query: 162 KRLAFSSSQLSGDKIF---SKAVTGDRRRERR-PIVVSPQAVSDSKNSQTCLDPEASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDHLYRMDYERFIQAHRETDADITVAALPMDEKRATAFGLMKIDEKGRIIEFS 854 + L+FSSS L+GDK+ S G R RR P++VSP+AVSDS+NSQTCLDP+ASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENP+WFQGTADAVRQYLWLFEEH VLE+L+LAGDHLYRMDYE+FIQAHRETDADITVAALPMDEKRATAFGLMKIDE+GRIIEF+ Sbjct: 32 RNLSFSSSHLAGDKLMPVSSLRSQGVRFNVRRSPMIVSPKAVSDSQNSQTCLDPDASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPDWFQGTADAVRQYLWLFEEHTVLEYLILAGDHLYRMDYEKFIQAHRETDADITVAALPMDEKRATAFGLMKIDEEGRIIEFA 266
BLAST of CV887103 vs. ExPASy Swiss-Prot
Match: GLGS_SOLLC (Glucose-1-phosphate adenylyltransferase small subunit, chloroplastic OS=Solanum lycopersicum PE=2 SV=1) HSP 1 Score: 402.905 bits (1034), Expect = 1.172e-111 Identity = 204/235 (86.81%), Postives = 219/235 (93.19%), Query Frame = 3 Query: 162 KRLAFSSSQLSGDKIF---SKAVTGDRRRERR-PIVVSPQAVSDSKNSQTCLDPEASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDHLYRMDYERFIQAHRETDADITVAALPMDEKRATAFGLMKIDEKGRIIEFS 854 + L+FSSS L+GDK+ S G R RR P++VSP+AVSDS+NSQTCLDP+ASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMG YKNEGFVEVLAAQQSPENP+WFQGTADAVRQYLWLFEEHNVLE+L+LAGDHLYRMDYE+FIQAHRETDADITVAALPMDEKRATAFGLMKIDE+GRIIEF+ Sbjct: 32 RNLSFSSSHLAGDKLMPVSSLRSQGVRFNVRRSPLIVSPKAVSDSQNSQTCLDPDASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGEYKNEGFVEVLAAQQSPENPDWFQGTADAVRQYLWLFEEHNVLEYLILAGDHLYRMDYEKFIQAHRETDADITVAALPMDEKRATAFGLMKIDEEGRIIEFA 266
BLAST of CV887103 vs. ExPASy Swiss-Prot
Match: GLGS_ARATH (Glucose-1-phosphate adenylyltransferase small subunit, chloroplastic OS=Arabidopsis thaliana GN=APS1 PE=2 SV=2) HSP 1 Score: 400.979 bits (1029), Expect = 4.455e-111 Identity = 210/269 (78.07%), Postives = 226/269 (84.01%), Query Frame = 3 Query: 60 MASMASIGSLKVXXXXXXXXXXXXXXXXXXXXVVKRLAFSSSQLSGDKIFSKAVTGDRRRE----RRPIVVSPQAVSDSKNSQTCLDPEASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDHLYRMDYERFIQAHRETDADITVAALPMDEKRATAFGLMKIDEKGRIIEFS 854 MAS+++IG LKV + L+FSSS S D S T R + R PI+VSP+AVSDS+NSQTCLDP+AS SVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLE+L+LAGDHLYRMDYE+FIQAHRETDADITVAALPMDE+RATAFGLMKIDE+GRIIEF+ Sbjct: 1 MASVSAIGVLKVPPASTSNSTGKATEAVP----TRTLSFSSSVTSSDDKISLKSTVSRLCKSVVRRNPIIVSPKAVSDSQNSQTCLDPDASSSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEYLILAGDHLYRMDYEKFIQAHRETDADITVAALPMDEQRATAFGLMKIDEEGRIIEFA 265
BLAST of CV887103 vs. ExPASy Swiss-Prot
Match: GLGS1_VICFA (Glucose-1-phosphate adenylyltransferase small subunit 1, chloroplastic OS=Vicia faba GN=AGPC PE=2 SV=1) HSP 1 Score: 398.282 bits (1022), Expect = 2.888e-110 Identity = 201/234 (85.90%), Postives = 219/234 (93.59%), Query Frame = 3 Query: 162 KRLAFSSS-QLSGDKIFSKAVTGDRRRE--RRPIVVSPQAVSDSKNSQTCLDPEASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDHLYRMDYERFIQAHRETDADITVAALPMDEKRATAFGLMKIDEKGRIIEFS 854 K L+FSSS QLSG+KI + + G R + + ++P+AVSDS+NSQTCLDP+ASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASN+GGYKNEGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLE+L+LAGDHLYRMDYE+FIQAHRE+DADITVAALPMDEKRATAFGLMKIDE+GRIIEF+ Sbjct: 20 KNLSFSSSSQLSGNKILTVSGNGAPRGRCTLKHVFLTPKAVSDSQNSQTCLDPDASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNLGGYKNEGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEYLILAGDHLYRMDYEKFIQAHRESDADITVAALPMDEKRATAFGLMKIDEEGRIIEFA 253
BLAST of CV887103 vs. ExPASy Swiss-Prot
Match: GLGS_ORYSJ (Glucose-1-phosphate adenylyltransferase small subunit, chloroplastic/amyloplastic OS=Oryza sativa subsp. japonica GN=AGPS PE=2 SV=4) HSP 1 Score: 390.193 bits (1001), Expect = 7.864e-108 Identity = 189/215 (87.91%), Postives = 205/215 (95.35%), Query Frame = 3 Query: 210 SKAVTGDRRRERRPIVVSPQAVSDSKNSQTCLDPEASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDHLYRMDYERFIQAHRETDADITVAALPMDEKRATAFGLMKIDEKGRIIEFS 854 S + + R RRP+V SP+AVSDSK+SQTCLDP+AS SVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAY +N+GGYKNEGFVEVLAAQQSP+NPNWFQGTADAVRQYLWLFEEHNV+EFL+LAGDHLYRMDYE+FIQAHRETD+DITVAALPMDEKRATAFGLMKIDE+GRI+EF+ Sbjct: 45 SSSSSSSAGRRRRPLVFSPRAVSDSKSSQTCLDPDASTSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYGNNIGGYKNEGFVEVLAAQQSPDNPNWFQGTADAVRQYLWLFEEHNVMEFLILAGDHLYRMDYEKFIQAHRETDSDITVAALPMDEKRATAFGLMKIDEEGRIVEFA 259
BLAST of CV887103 vs. ExPASy Swiss-Prot
Match: GLGS_HORVU (Glucose-1-phosphate adenylyltransferase small subunit, chloroplastic/amyloplastic OS=Hordeum vulgare PE=2 SV=1) HSP 1 Score: 383.259 bits (983), Expect = 9.613e-106 Identity = 186/204 (91.18%), Postives = 199/204 (97.55%), Query Frame = 3 Query: 243 RRPIVVSPQAVSDSKNSQTCLDPEASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDHLYRMDYERFIQAHRETDADITVAALPMDEKRATAFGLMKIDEKGRIIEFS 854 RRP SP+AVSDSK+SQTCLDP+AS SVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAY SN+GGYKNEGFVEVLAAQQSP+NP+WFQGTADAVRQYLWLFEEHNV+E+L+LAGDHLYRMDYE+FIQAHRETDADITVAALPMDE+RATAFGLMKIDE+GRIIEF+ Sbjct: 55 RRPFFFSPRAVSDSKSSQTCLDPDASTSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYGSNIGGYKNEGFVEVLAAQQSPDNPDWFQGTADAVRQYLWLFEEHNVMEYLILAGDHLYRMDYEKFIQAHRETDADITVAALPMDEERATAFGLMKIDEEGRIIEFA 258
BLAST of CV887103 vs. ExPASy Swiss-Prot
Match: GLGS_WHEAT (Glucose-1-phosphate adenylyltransferase small subunit, chloroplastic/amyloplastic OS=Triticum aestivum GN=AGP-S PE=2 SV=1) HSP 1 Score: 345.51 bits (885), Expect = 2.221e-94 Identity = 168/191 (87.96%), Postives = 180/191 (94.24%), Query Frame = 3 Query: 282 SKNSQTCLDPEASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDHLYRMDYERFIQAHRETDADITVAALPMDEKRATAFGLMKIDEKGRIIEFS 854 S + L+P SVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYV TQFNSASLNRHLSRAY SN+GGYKNEGFVEVLAAQQSP+NP+WFQGTADAVRQYLWLFEEHNV+E+L+LAGDHLYRMDYE+FIQAHRETDADITVAALPMDE+RATAFGLMKIDE+GRIIEF+ Sbjct: 28 SSSKHADLNPHVDDSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVRTQFNSASLNRHLSRAYGSNIGGYKNEGFVEVLAAQQSPDNPDWFQGTADAVRQYLWLFEEHNVMEYLILAGDHLYRMDYEKFIQAHRETDADITVAALPMDEERATAFGLMKIDEEGRIIEFA 218 The following BLAST results are available for this feature:
BLAST of CV887103 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 308
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Sequences
The
following sequences are available for this feature:
EST sequence >CV887103 ID=CV887103; Name=CV887103; organism=Citrus sinensis; type=EST; length=854bpback to top |