CV887066

Overview
NameCV887066
Unique NameCV887066
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length625
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV887066 vs. ExPASy Swiss-Prot
Match: HEBP2_HUMAN (Heme-binding protein 2 OS=Homo sapiens GN=HEBP2 PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 3.360e-18
Identity = 57/144 (39.58%), Postives = 74/144 (51.39%), Query Frame = 1
Query:    4 ATRTGFLQLFDYIQGKNEYEQTIEMTAPVITEVLPSDGPFCESSFTVSFYVPKVNQANPPP--AKGLHLQQWKPTYAAVRQFSGFVSDSNIGEEAAALQASLAGTEWAAAIEKRHAEDSTSSYIVAQYNSPFEFYNRVNEIWLL 429
            A +TGF +L  YIQGKNE E  I+MTAPV + V P  GPF ES+ T+S Y+P   Q +PP      + ++        VR F GF S     E+   L AS+   +     EK         Y  A YNSP +  NR NE+WL+
Sbjct:   61 AIQTGFTKLNSYIQGKNEKEMKIKMTAPVTSYVEPGSGPFSESTITISLYIPSEQQFDPPRPLESDVFIEDRAEMTVFVRSFDGFSSAQKNQEQLLTL-ASILREDGKVFDEK--------VYYTAGYNSPVKLLNRNNEVWLI 195          
BLAST of CV887066 vs. ExPASy Swiss-Prot
Match: HEBP2_MOUSE (Heme-binding protein 2 OS=Mus musculus GN=Hebp2 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 8.275e-17
Identity = 54/144 (37.50%), Postives = 77/144 (53.47%), Query Frame = 1
Query:    4 ATRTGFLQLFDYIQGKNEYEQTIEMTAPVITEVLPSDGPFCESSFTVSFYVPKVNQANPP-PAKG-LHLQQWKPTYAAVRQFSGFVSDSNIGEEAAALQASLAGTEWAAAIEKRHAEDSTSSYIVAQYNSPFEFYNRVNEIWLL 429
            A +TGF +L  YIQGKNE E  I++TAPV + V P   PF ES+ T+S Y+P   Q +PP P++  + ++        VR F GF S     E+   L A++   E     EK         +  A Y+SPF+  +R NE+WL+
Sbjct:   61 AIQTGFTKLNGYIQGKNEKEMKIKLTAPVTSYVEPGSSPFSESTITISLYIPSEQQPDPPRPSESDVFIEDRAEMTVFVRSFDGFSSGQKNQEQLLTL-ANILREEGKVFNEK--------VFYTAGYSSPFQLLDRNNEVWLI 195          
The following BLAST results are available for this feature:
BLAST of CV887066 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
HEBP2_HUMAN3.360e-1839.58Heme-binding protein 2 OS=Homo sapiens GN=HEBP2 PE... [more]
HEBP2_MOUSE8.275e-1737.50Heme-binding protein 2 OS=Mus musculus GN=Hebp2 PE... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS04_2_026H11_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_026_T3_H11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV887066 ID=CV887066; Name=CV887066; organism=Citrus sinensis; type=EST; length=625bp
CAAGCTACCAGAACTGGCTTTCTCCAGCTATTTGATTACATTCAAGGAAA
GAACGAATATGAGCAAACAATAGAGATGACAGCTCCAGTAATCACTGAAG
TTTTACCAAGTGATGGACCCTTCTGTGAATCTTCATTCACCGTTAGCTTT
TACGTCCCAAAGGTGAACCAAGCCAACCCACCTCCAGCAAAAGGCCTCCA
TCTCCAACAATGGAAACCAACGTACGCGGCTGTGAGACAGTTCAGCGGGT
TTGTATCAGACTCGAACATTGGTGAAGAAGCTGCTGCATTGCAAGCCAGC
CTTGCAGGCACTGAATGGGCTGCAGCCATTGAGAAAAGACATGCAGAAGA
CTCCACTTCAAGTTACATTGTTGCACAGTATAACTCTCCCTTTGAATTTT
ACAACAGAGTGAATGAGATATGGCTTTTGTTTGATTTGGAAGAAGGGTTT
GCAATTTGAGTTTGCAAATCTGGTTTGTAATGAAGAACTAAGTGGAGAGA
AATCAAGTAGATGGATTTTGCTTTATACGGTTAATGTAATAATCGTTTTG
CATTGTCATATGAAATGTTAGAGGGATCCATTATTGAATAAAGTGTCGTC
CGTTGGCATAAAAAAAAAAAAAAAA
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