CV887021

Overview
NameCV887021
Unique NameCV887021
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length926
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV887021 vs. ExPASy Swiss-Prot
Match: ARGD_ALNGL (Acetylornithine aminotransferase, mitochondrial OS=Alnus glutinosa GN=AG118 PE=2 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 8.469e-50
Identity = 101/150 (67.33%), Postives = 119/150 (79.33%), Query Frame = 2
Query:  476 RPMVAAASVNVEVNDAARGSAGGLGRNNKEVMEAEKKLLVGTYNRAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAI*FARKFQRHSNP 925
            R +  +A  NVEV   +     G+   +KEVMEA  ++LVGTY R PVVL+ GKGCKLYD EGREYLDLS+GIAVN LGH D+DW++AV +QA  LTHVSN++YSIPQ+ELAKRLVA SFADRVFFSN+GTEANEAAI FARKFQR + P
Sbjct:   25 RHLQVSACANVEVQAPSSVKKQGV---SKEVMEAAGRVLVGTYARVPVVLSRGKGCKLYDPEGREYLDLSAGIAVNVLGHADSDWLRAVTEQAATLTHVSNVFYSIPQVELAKRLVASSFADRVFFSNSGTEANEAAIKFARKFQRFTRP 171          
BLAST of CV887021 vs. ExPASy Swiss-Prot
Match: ARGD_METJA (Acetylornithine aminotransferase OS=Methanocaldococcus jannaschii GN=argD PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.718e-26
Identity = 59/113 (52.21%), Postives = 78/113 (69.03%), Query Frame = 2
Query:  569 MEAEKKLLVGTYNRAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAI*FARKF 907
            ++ EKK  +  Y R PVVL  GKG ++YD +G++YLD  +GI VN +GH     ++A+  QA  L H SN+YY+IPQI+LAK+LV  S  DR FF N+G EANE AI FARK+
Sbjct:    7 IDLEKKYHLQIYGRLPVVLVEGKGMEVYDIDGKKYLDFLAGIGVNNVGHCHPKVVEAIKKQAETLIHTSNIYYTIPQIKLAKKLVELSGLDRAFFCNSGAEANEGAIKFARKY 119          
BLAST of CV887021 vs. ExPASy Swiss-Prot
Match: ARGD_METTH (Acetylornithine aminotransferase OS=Methanobacterium thermoautotrophicum GN=argD PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.931e-26
Identity = 58/118 (49.15%), Postives = 81/118 (68.64%), Query Frame = 2
Query:  554 NNKEVMEAEKKLLVGTYNRAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAI*FARKF 907
            +++E++E E+K ++ TY R P+VL+ GKG  ++D EG  Y+D  +G+AVN++GH       A+  QA  L H SN+YY+  Q+ELAK L A S  DRVFF+N+G EANE AI  ARKF
Sbjct:    2 DSEEIIELERKFIMQTYTRQPIVLSHGKGATVWDIEGNSYIDCFAGVAVNSIGHAHPKVALAICHQAQRLIHSSNIYYTREQVELAKLLTAISPHDRVFFANSGAEANEGAIKLARKF 119          
BLAST of CV887021 vs. ExPASy Swiss-Prot
Match: ARGD_THETN (Acetylornithine aminotransferase OS=Thermoanaerobacter tengcongensis GN=argD PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.232e-24
Identity = 55/110 (50.00%), Postives = 77/110 (70.00%), Query Frame = 2
Query:  578 EKKLLVGTYNRAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAI*FARKF 907
            EKK L+ TYNR P++L  G+G +++D+EG  YLD  +GIAVN+LGH     ++A+  QA  L H SN+Y++  QIELA+ +   SF  +VFF+N+G EANE AI  ARK+
Sbjct:    5 EKKYLMDTYNRYPIMLVKGEGTRVWDSEGNAYLDFVAGIAVNSLGHCHPALVEAIKKQAETLIHCSNLYWNEKQIELARMISENSFGGKVFFANSGAEANEGAIKLARKY 114          
BLAST of CV887021 vs. ExPASy Swiss-Prot
Match: ASTC_CAUCR (Succinylornithine transaminase OS=Caulobacter crescentus GN=astC PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 2.101e-24
Identity = 56/107 (52.34%), Postives = 77/107 (71.96%), Query Frame = 2
Query:  590 LVGTYNRAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAI*FARKFQ 910
            L+ TY RA + +  G+GC LYD +GR+YLDL++G+AVN LGHGD   ++A+  QA++L H SN+Y    Q  LA +L   +FADRVFF+N+G EA EAAI  AR++Q
Sbjct:    4 LMNTYARANIDIVRGEGCWLYDQDGRDYLDLAAGVAVNTLGHGDPRLVQALKTQADILWHASNLYRLPAQEALATKLTDATFADRVFFANSGAEAVEAAIKTARRWQ 110          
BLAST of CV887021 vs. ExPASy Swiss-Prot
Match: CYT5_ARATH (Cysteine proteinase inhibitor 5 OS=Arabidopsis thaliana GN=CYS5 PE=2 SV=2)

HSP 1 Score: 112.849 bits (281), Expect = 2.744e-24
Identity = 53/90 (58.89%), Postives = 69/90 (76.67%), Query Frame = -2
Query:  128 ALVGGWKPIEDPKEKHVMEIGQFAVTEYNKQSKSALKFESVEKGETQVVSGTNYRLILVVKDGPS-TKKFEAVVWEKPWEHFKSLTSFKP 394
            A VGGW PI +  +  V+EIG+FAV+EYNK+S+S LKFE+V  GETQVVSGTNYRL +   DG   +K + A+VW+KPW  F++LTSF+P
Sbjct:   26 ARVGGWSPISNVTDPQVVEIGEFAVSEYNKRSESGLKFETVVSGETQVVSGTNYRLKVAANDGDGVSKNYLAIVWDKPWMKFRNLTSFEP 115          
BLAST of CV887021 vs. ExPASy Swiss-Prot
Match: ARGD_THEMA (Acetylornithine aminotransferase OS=Thermotoga maritima GN=argD PE=1 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 4.680e-24
Identity = 55/106 (51.89%), Postives = 73/106 (68.87%), Query Frame = 2
Query:  590 LVGTYNRAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAI*FARKF 907
            L+ TY+R P     GKG  +YD +G  YLD +SGIAVN LGH     ++A+ DQA  L H SN++++ PQ+ELA+ L   +F  +VFF+NTGTEANEAAI  ARK+
Sbjct:    3 LMNTYSRFPATFVYGKGSWIYDEKGNAYLDFTSGIAVNVLGHSHPRLVEAIKDQAEKLIHCSNLFWNRPQMELAELLSKNTFGGKVFFANTGTEANEAAIKIARKY 108          
BLAST of CV887021 vs. ExPASy Swiss-Prot
Match: ARGD_HAEDU (Acetylornithine aminotransferase OS=Haemophilus ducreyi GN=argD PE=3 SV=2)

HSP 1 Score: 111.694 bits (278), Expect = 6.112e-24
Identity = 51/115 (44.35%), Postives = 78/115 (67.83%), Query Frame = 2
Query:  563 EVMEAEKKLLVGTYNRAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAI*FARKF 907
            ++ + +   +  TY +  + L+ G+GC+++D +G +YLD +SGI VN+LG  D DW++AV+ Q + L+H SN++Y+ P   LAK LV  S   RVFF+N+G EANE AI  ARK+
Sbjct:    5 QIKQLDANYIAQTYAKFDLALSHGQGCEVWDFDGNKYLDFTSGIGVNSLGWADPDWLEAVIAQLHKLSHTSNLFYTEPSARLAKHLVQVSGLKRVFFANSGAEANEGAIKVARKY 119          
BLAST of CV887021 vs. ExPASy Swiss-Prot
Match: ARGD_DICDI (Probable acetylornithine aminotransferase, mitochondrial OS=Dictyostelium discoideum GN=argD PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 1.043e-23
Identity = 58/126 (46.03%), Postives = 86/126 (68.25%), Query Frame = 2
Query:  545 LGRNNKE----VMEAEKKLLVGTYNR-APVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACS-FADRVFFSNTGTEANEAAI*FARK 904
            L R+NK+     ++    +++ TY R + +V   GK   LYD +G +YLD  +GIAVNALGH +  W + V +Q+  LTH+SN+YY+ P IELA+ ++A +   D+VFF+N+GTEANEAA+ FA+K
Sbjct:   39 LDRDNKDGTSDYIKLHDNVIMNTYGRVSDIVFTHGKDSWLYDMKGDKYLDFGAGIAVNALGHSNDGWSEVVANQSKKLTHLSNLYYNQPAIELAQSMIASTPIFDKVFFANSGTEANEAALKFAKK 164          
BLAST of CV887021 vs. ExPASy Swiss-Prot
Match: ARGD_ARCFU (Acetylornithine aminotransferase OS=Archaeoglobus fulgidus GN=argD PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 6.758e-23
Identity = 51/112 (45.54%), Postives = 77/112 (68.75%), Query Frame = 2
Query:  569 MEAEKKLLVGTYNRAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAI*FARK 904
            +E EKK ++ TY R  VV+  G+GC +YD  G+ YLDL +GIA  ++GH ++  ++ + +Q   L H+SN+YY+ PQ+ELA++L   +  DR FF N+G EA EAA+ FAR+
Sbjct:    4 IEREKKHILQTYTRQKVVIERGEGCYVYDVNGKRYLDLVAGIATVSIGHCNSHLVERLKEQLEKLIHISNLYYTTPQVELAEKLSEIAGMDRFFFCNSGAEAVEAALKFARR 115          
The following BLAST results are available for this feature:
BLAST of CV887021 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 162
Match NameE-valueIdentityDescription
ARGD_ALNGL8.469e-5067.33Acetylornithine aminotransferase, mitochondrial OS... [more]
ARGD_METJA1.718e-2652.21Acetylornithine aminotransferase OS=Methanocaldoco... [more]
ARGD_METTH2.931e-2649.15Acetylornithine aminotransferase OS=Methanobacteri... [more]
ARGD_THETN1.232e-2450.00Acetylornithine aminotransferase OS=Thermoanaeroba... [more]
ASTC_CAUCR2.101e-2452.34Succinylornithine transaminase OS=Caulobacter cres... [more]
CYT5_ARATH2.744e-2458.89Cysteine proteinase inhibitor 5 OS=Arabidopsis tha... [more]
ARGD_THEMA4.680e-2451.89Acetylornithine aminotransferase OS=Thermotoga mar... [more]
ARGD_HAEDU6.112e-2444.35Acetylornithine aminotransferase OS=Haemophilus du... [more]
ARGD_DICDI1.043e-2346.03Probable acetylornithine aminotransferase, mitocho... [more]
ARGD_ARCFU6.758e-2345.54Acetylornithine aminotransferase OS=Archaeoglobus ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_026F07_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_026_T7_F07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV887021 ID=CV887021; Name=CV887021; organism=Citrus sinensis; type=EST; length=926bp
ATCTGAAGACTCACCTTTGACATTCATAAACAATATAATAATATCATCAC
TCACATAACGAAAACCTTAATAATTATCAATCTGAGATTACATGCATTGT
TATTTGTTAAACACCCTATTTAACCATAGGCTTAAACGAGGTGAGACTCT
TGAAATGCTCCCATGGCTTCTCCCAAACGACAGCTTCAAATTTCTTGGTC
GAAGGTCCGTCCTTGACGACCAAGATCAGCCGGTAATTGGTGCCGGAAAC
CACCTGAGTCTCGCCCTTCTCCACGCTCTCGAACTTCAACGCGCTCTTTG
ACTGTTTGTTGTACTCCGTCACCGCGAACTGTCCGATCTCCATCACGTGC
TTCTCCTTGGGGTCCTCTATCGGCTTCCATCCCCCAACCAACGCTCCTTT
ACGGTCGCCGGCGGCCATCCACTCTCACAATCGGGCAATCTCCGCCGCCA
GATCAAATTCAACGGCGTAAAACGGCGACCGATGGTGGCGGCGGCAAGTG
TGAACGTGGAAGTGAACGATGCGGCGCGTGGGAGCGCGGGGGGGTTGGGG
AGGAACAACAAGGAGGTGATGGAGGCGGAGAAGAAGTTACTCGTGGGGAC
GTACAATAGGGCACCAGTTGTGCTGGCGAGTGGTAAAGGATGTAAATTGT
ACGATGCTGAAGGGCGAGAGTATTTGGATTTGAGCTCGGGGATTGCTGTG
AATGCGCTTGGACATGGGGATGCTGATTGGATCAAGGCTGTTGTTGATCA
AGCTAATGTGTTGACTCATGTTAGCAATATGTATTATTCCATTCCTCAGA
TAGAGCTTGCTAAGCGTTTGGTGGCTTGTTCTTTTGCTGATCGTGTGTTT
TTCTCCAATACTGGAACGGAAGCAAATGAGGCTGCTATTTAATTTGCCAG
AAAGTTCCAGAGACACTCAAATCCTG
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