CV887020

Overview
NameCV887020
Unique NameCV887020
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length923
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV887020 vs. ExPASy Swiss-Prot
Match: ARGD_ALNGL (Acetylornithine aminotransferase, mitochondrial OS=Alnus glutinosa GN=AG118 PE=2 SV=1)

HSP 1 Score: 392.119 bits (1006), Expect = 2.331e-108
Identity = 194/249 (77.91%), Postives = 216/249 (86.75%), Query Frame = -2
Query:  176 KEHYRSPFELVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLAKPLAGGLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDVRGLGLIIGIEFDVSATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKTLPVLD 922
            KE+YRSPFE VMPGV F+EYGNIEA  +LIQ  K AAVFVEPIQGEGG+YSATKEFL  LR ACDD+G LLVFDEVQCGLGRTGYLWAHE Y +FPDIMTLAKPLAGGLPIGA LVTE+VASAI YGDHG+TFAG PLVC AA+ VLDKI  P FLASVSKKGHYFKE L  KL  N HV++VRG+GLI+GIE DVSA+P+V+AC +SGLLVLTAGKGNVVR+VPPLII+EQEL++A EIL + LP LD
Sbjct:  200 KENYRSPFEPVMPGVTFLEYGNIEAATQLIQRRKIAAVFVEPIQGEGGVYSATKEFLYALRKACDDSGTLLVFDEVQCGLGRTGYLWAHEIYDVFPDIMTLAKPLAGGLPIGAVLVTERVASAITYGDHGTTFAGGPLVCKAALTVLDKILRPGFLASVSKKGHYFKEMLINKLGGNSHVREVRGVGLIVGIELDVSASPLVNACLNSGLLVLTAGKGNVVRIVPPLIITEQELEKAAEILLQCLPALD 448          
BLAST of CV887020 vs. ExPASy Swiss-Prot
Match: ARGD_DICDI (Probable acetylornithine aminotransferase, mitochondrial OS=Dictyostelium discoideum GN=argD PE=3 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 2.001e-59
Identity = 120/256 (46.88%), Postives = 170/256 (66.41%), Query Frame = -2
Query:  170 KEHYRSPFELVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYG---IFPDIMTLAKPLAGGLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPH-VKDVRGL-GLIIGIEFDVSATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKTLPVLDSN 922
            K  YR  +  ++PGV+F EY +IE+ +KL+   KT AV +EP+QGEGG+ +AT EF+Q L   C +   LL+ DEVQCG+GRTG LWAH  +      PDIMTLAKPLAGGLPIGA LV++KVAS I  GDHG+TF G PLVC     V ++IS P+FL  V +KG Y  + LK+   + P+ + ++R + GL +GI+ D + + +V   +   +L++ AG  +V+R  PPL I++QE+DQ + +L   L  ++SN
Sbjct:  197 KSKYREIYGPLVPGVHFAEYNDIESVKKLMSKSKTCAVIIEPVQGEGGLEAATVEFMQQLYKLCKENDCLLIVDEVQCGIGRTGQLWAHTRFDTEKCKPDIMTLAKPLAGGLPIGAVLVSDKVASEIKPGDHGTTFGGGPLVCEVGKYVFERISQPSFLKEVQEKGKYLTDGLKKLKDQFPNSILEIRTVGGLFVGIQLDHNVSDLVSYAKSQKILIINAG-DDVIRFCPPLTITKQEIDQLLLVLKNYLIKVNSN 451          
BLAST of CV887020 vs. ExPASy Swiss-Prot
Match: ARGD_THEMA (Acetylornithine aminotransferase OS=Thermotoga maritima GN=argD PE=1 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 6.436e-58
Identity = 116/244 (47.54%), Postives = 162/244 (66.39%), Query Frame = -2
Query:  188 YRSPFELVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLAKPLAGGLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDVRGLGLIIGIEF--DVSATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKTL 913
            Y+ PFE ++PG  + E+ N+E  R+ +      AVF+EPIQGE GI  ATKEFL+  R  CD+  ALLVFDEVQCG+GRTG L+A++ YG+ PD++T AK L GG+PIGA +V E+ A+ +  GDHG+TF G+PL C A + V+ +++   FL  V +KG+Y  + L++       V DVRG+GL+IGI+F  +VS   V   C ++ LLV+ AG  N +R +PPL +   E+D AVE L K L
Sbjct:  142 YQKPFEPLVPGFEYFEFNNVEDLRRKMSED-VCAVFLEPIQGESGIVPATKEFLEEARKLCDEYDALLVFDEVQCGMGRTGKLFAYQKYGVVPDVLTTAKGLGGGVPIGAVIVNER-ANVLEPGDHGTTFGGNPLACRAGVTVIKELTKEGFLEEVEEKGNYLMKKLQEMKEEYDVVADVRGMGLMIGIQFREEVSNREVATKCFENKLLVVPAG-NNTIRFLPPLTVEYGEIDLAVETLKKVL 382          
BLAST of CV887020 vs. ExPASy Swiss-Prot
Match: ARGD_METJA (Acetylornithine aminotransferase OS=Methanocaldococcus jannaschii GN=argD PE=3 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 2.070e-56
Identity = 106/241 (43.98%), Postives = 160/241 (66.39%), Query Frame = -2
Query:  200 KEHYRSPFELVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLAKPLAGGLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDVRGLGLIIGIEFDVSATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEIL 922
            K  Y+  F  + PG  +V + +IEA ++ I   KTAA+ +EP+QGEGGI+ A K++L+ +RD CDD   +L+FDEVQCG+GRTG ++A EHYG+ PDI+TLAK L GG+PIGA ++ E++A A++YGDHG+TF G+PL C+AA+A ++ I        V +KG YF   L+  + +   +K+VRGLGL+IG E + +   +V    + G L+       V+R +PPLI+ ++ +D  +  L
Sbjct:  151 KPKYQDGFYPLPPGFKYVPFNDIEALKEAITD-KTAAIMIEPVQGEGGIHVADKDYLKAVRDLCDDKNIVLIFDEVQCGMGRTGRMFAFEHYGVEPDILTLAKALGGGVPIGAVVLKEEIAKALSYGDHGTTFGGNPLACSAALASVEVIEELIKDDKVIEKGKYFIRKLENLIEKYNFIKEVRGLGLMIGAELEFNGADIVKKMLEKGFLI-NCTSDTVLRFLPPLIVEKEHIDALINAL 389          
BLAST of CV887020 vs. ExPASy Swiss-Prot
Match: ARGD_YARLI (Acetylornithine aminotransferase, mitochondrial OS=Yarrowia lipolytica GN=ARG8 PE=3 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 1.640e-53
Identity = 110/243 (45.27%), Postives = 157/243 (64.61%), Query Frame = -2
Query:  188 YRSPFELVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLAKPLAGGLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPH-VKDVRGLGLIIGIEFDVSATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKTL 913
            Y++PF  ++PGV    Y + +A   + +  KT  V VEP+QGEGG+Y A  EFLQ LR+ CD+ GA+L+FDE+QCGLGRTG LWAH+   + PDI+T+AK L  G PIGA +VTE VA  I  GDHG+T+ G+PL       VL ++++   L +V K     ++ + +     P  + +VRG GL++GI+F    + VV A R++GLLV+TAG  N VRLVP L I ++ + + +EIL K +
Sbjct:  167 YQAPFAPLVPGVKTGVYNDPKAADLITE--KTCGVIVEPVQGEGGVYKANDEFLQALRNKCDEVGAMLIFDEIQCGLGRTGRLWAHDK--VHPDILTMAKALGNGFPIGATMVTEAVADKIAIGDHGTTYGGNPLASRVGHYVLSQVASKEVLDNVKKVSQQIRDAVAEVQEEFPELITEVRGDGLLLGIQFSKDPSKVVAAARENGLLVITAGT-NTVRLVPALNIDQEAVTEGLEILKKAI 404          
BLAST of CV887020 vs. ExPASy Swiss-Prot
Match: ARGD_CLOAB (Acetylornithine aminotransferase OS=Clostridium acetobutylicum GN=argD PE=3 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 1.063e-52
Identity = 108/238 (45.38%), Postives = 160/238 (67.23%), Query Frame = -2
Query:  203 YRSPFELVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLAKPLAGGLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFL-ASVSKKGHYFKETLKQKLARNPHVKDVRGLGLIIGIEFDVSATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEI 913
            Y+  F+ ++  V  V++ +++  ++ I   KTAAV VEPIQGEGGI  A KE+L+ LRD CD+  ALL+FDEVQCG+GR G L+A++ + + PDI+ +AK L GG PIGA L  E VAS+   GDHG+T+ G+PL C  AIAVL ++ +   +  +V++K  Y  + L     +   + DVRG+GL+IG+E       +++ C +S LL++TAGK NVVR +PPL +S +E+D+A+ I
Sbjct:  146 YQESFKPLIGAVKSVKFNDLDDIKQKIS-SKTAAVIVEPIQGEGGIIPAKKEYLKLLRDLCDENNALLIFDEVQCGMGRVGSLFAYQKFEVVPDIVCIAKALGGGFPIGAMLAKESVASSFVPGDHGNTYGGNPLACAVAIAVLKELVDKKVVEINVNEKSKYLFDKLMTLKEKYKVINDVRGMGLLIGVEVACDVKKIINKCFESKLLLITAGK-NVVRFLPPLNVSFEEIDKALGI 381          
BLAST of CV887020 vs. ExPASy Swiss-Prot
Match: ARGD_THETN (Acetylornithine aminotransferase OS=Thermoanaerobacter tengcongensis GN=argD PE=3 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 3.094e-52
Identity = 107/242 (44.21%), Postives = 159/242 (65.70%), Query Frame = -2
Query:  200 KEHYRSPFELVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLAKPLAGGLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDVRGLGLIIGIEFDV-SATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEIL 922
            +E Y   F  ++ G  +V   +IEA  + +   +  A+ +E IQGEGGI+ AT E+++ +R  CD+   L + DEVQ G+GRTG L+ +EHYG+ PDIMTLAK L GG PIG A+V ++  +    GDH STF G+PL C A IAVL++++   FL  V KKG YF+E L+    ++  VK++RG GL++G E D+  A+ +V    + GLL+ +    NV+R VPPLI++E+E+D+A++IL
Sbjct:  146 QEKYHKGFGPLLAGFKYVPLNDIEALYEAVDD-EVCAIMLEVIQGEGGIHEATPEYVKAVRKICDENDLLFILDEVQTGIGRTGKLFGYEHYGVVPDIMTLAKGLGGGFPIG-AIVAKEDKAVFKPGDHASTFGGNPLACAAGIAVLNEVTKDGFLEGVDKKGKYFREGLETLQKKHKVVKEIRGKGLMVGCEVDLEDASEIVLKALEKGLLINSVSH-NVLRFVPPLIVTEEEIDEALQIL 384          
BLAST of CV887020 vs. ExPASy Swiss-Prot
Match: ARGD1_BRAJA (Acetylornithine aminotransferase 1 OS=Bradyrhizobium japonicum GN=argD1 PE=3 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 4.467e-51
Identity = 116/249 (46.59%), Postives = 154/249 (61.85%), Query Frame = -2
Query:  170 YRSPFELVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLAKPLAGGLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPH-VKDVRGLGLIIGIEFDVSATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKTLPVLDSN 913
            Y   F   M G + V +G+IEA +K I P +TA + +EPIQGEGG+ SAT  FL+ LR  CD+ G LL FDEVQ G+GRTG L+AH   G+ PD+M+LAK L GG PIGA L T   A+ +  G HGSTF G+PL   AA AVLD +  P F   V K     K+ L   + R+   V +VRG GL+IGI+  V +  +V A R+  LL + AG  NVVR +PPLI++E E++ +V  L +    + S+
Sbjct:  152 YLEGFGPPMDGFDQVPHGDIEAVKKAIGP-QTAGILIEPIQGEGGVRSATPAFLKALRQLCDEKGLLLAFDEVQTGMGRTGDLFAHRRTGVTPDVMSLAKALGGGFPIGAILATADAAAGMGPGSHGSTFGGNPLAIAAANAVLDVMLKPGFFDHVQKMSLLLKQKLASVIDRHGDVVSEVRGEGLLIGIKAVVPSGDLVAALRNEKLLTVGAG-DNVVRFLPPLIVTEAEIEDSVGRLERACAAISSS 398          
BLAST of CV887020 vs. ExPASy Swiss-Prot
Match: ARGD_CORGL (Acetylornithine aminotransferase OS=Corynebacterium glutamicum GN=argD PE=3 SV=2)

HSP 1 Score: 198.749 bits (504), Expect = 3.782e-50
Identity = 108/241 (44.81%), Postives = 159/241 (65.98%), Query Frame = -2
Query:  188 LVMP-GVNFVEYGNIEATRKLIQ--PGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLAKPLAGGLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDVRGLGLIIGI--EFDVSATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKTL 895
            L MP GV F  YG+ +  RK+++  P   AA+F+EPIQGE G+  A + FL+ +R+ CD+ G L++ DEVQ G+GRTG  +AH+H G+ PD++T+AK L GGLPIGA L T + A  +  G HG+TF G+P+ C AA AVL  + + AF A V++KG  FKE     LA+   V DVRG GL++G+  E DV+   V+D  +    ++L A   N++RL PPL+I+++E+  AV+ + +T+
Sbjct:  157 LPMPSGVEFYPYGDTDYLRKMVETNPTDVAAIFLEPIQGETGVVPAPEGFLKAVRELCDEYGILMITDEVQTGVGRTGDFFAHQHDGVVPDVVTMAKGLGGGLPIGACLATGRAAELMTPGKHGTTFGGNPVACAAAKAVLSVVDD-AFCAEVARKGELFKEL----LAKVDGVVDVRGRGLMLGVVLERDVAKQAVLDGFKHG--VILNAPADNIIRLTPPLVITDEEIADAVKAIAETI 390          
BLAST of CV887020 vs. ExPASy Swiss-Prot
Match: ARGD_DEBHA (Acetylornithine aminotransferase, mitochondrial OS=Debaryomyces hansenii GN=ARG8 PE=3 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 4.939e-50
Identity = 102/255 (40.00%), Postives = 160/255 (62.75%), Query Frame = -2
Query:  170 EHYRSPFELVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHY--GIFPDIMTLAKPLAGGLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNP-HVKDVRGLGLIIGIEF--DVSATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKTLPVLDSN 919
            E Y+ PF  ++PGV   E  +I +  KLI   KT AV +EPIQGEGG+ +   EFL  L+  C D   +L++DE+QCGLGR+G LWAH +      PDI+T+AK L  G PIGA +V++K+   +  GDHG+T+ G+PL       V+D++S+  FL  V +K   F + L +   ++P H+ +V+G GL++G++   ++    VV  CR++GLLV++AG  NV+R+VP L I  + +++ +++L K +  L  +
Sbjct:  205 EKYQKPFAPLVPGVKIAEPNDISSVEKLISKEKTCAVIIEPIQGEGGVNAIDAEFLVSLKKLCVDNEVVLIYDEIQCGLGRSGKLWAHCNLPEEAHPDILTMAKALGNGFPIGAVMVSDKIEKVLKVGDHGTTYGGNPLGSKIGSYVVDQVSDKEFLLEVEEKSEKFTKGLSKIANKHPDHIGEVKGKGLLLGLQLKGNLDVGDVVAKCRENGLLVISAGM-NVLRIVPALNIPNEAIEEGLDVLDKCIDELSKD 458          
The following BLAST results are available for this feature:
BLAST of CV887020 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ARGD_ALNGL2.331e-10877.91Acetylornithine aminotransferase, mitochondrial OS... [more]
ARGD_DICDI2.001e-5946.88Probable acetylornithine aminotransferase, mitocho... [more]
ARGD_THEMA6.436e-5847.54Acetylornithine aminotransferase OS=Thermotoga mar... [more]
ARGD_METJA2.070e-5643.98Acetylornithine aminotransferase OS=Methanocaldoco... [more]
ARGD_YARLI1.640e-5345.27Acetylornithine aminotransferase, mitochondrial OS... [more]
ARGD_CLOAB1.063e-5245.38Acetylornithine aminotransferase OS=Clostridium ac... [more]
ARGD_THETN3.094e-5244.21Acetylornithine aminotransferase OS=Thermoanaeroba... [more]
ARGD1_BRAJA4.467e-5146.59Acetylornithine aminotransferase 1 OS=Bradyrhizobi... [more]
ARGD_CORGL3.782e-5044.81Acetylornithine aminotransferase OS=Corynebacteriu... [more]
ARGD_DEBHA4.939e-5040.00Acetylornithine aminotransferase, mitochondrial OS... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_026F07_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_026_T3_F07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV887020 ID=CV887020; Name=CV887020; organism=Citrus sinensis; type=EST; length=923bp
ATAAGTAACTGGTTTATTATATTACCCAATAAATGATGATAACAACCACA
ACTTAACTTCAGGTGAGGTCACAGCAGTTTTCATCAACCCAGGGTTGCAG
CATAAATTGTTAACTTAAGCTAAATCCTTCAACTGCATCCAAGCTCGAAT
GAGGTTCCTCCTAGTTTGAATTGCTGTCCAGCACCGGCAAGGTTTTACAT
AAAATTTCAACTGCTTGATCAAGCTCCTGCTCTGATATGATCAGTGGTGG
TACTAGCCTCACAACATTCCCTTTACCAGCAGTGAGTACAAGAAGGCCAG
AGTCTCGACATGCATCAACCACAGGCGTGGCAGATACGTCGAACTCAATT
CCAATAATTAGCCCGAGTCCACGGACATCTTTCACATGTGGATTTCTTGC
CAGTTTCTGCTTTAAAGTTTCTTTGAAGTAATGGCCTTTCTTGGAGACAC
TGGCCAAGAAAGCAGGATTGGAGATTTTATCTAGAACAGCAATGGCAGCA
TTGCAGACAAGGGGACTGCCGGCAAAAGTGCTTCCATGGTCACCATAATT
TATGGCAGATGCAACTTTTTCAGTTACTAATGCAGCTCCAATAGGAAGGC
CTCCGGCAAGAGGTTTGGCAAGTGTCATTATATCTGGGAAGATACCATAG
TGCTCATGAGCCCAAAGGTATCCTGTTCGGCCTAGACCACATTGAACCTC
ATCGAAGACAAGGAGAGCCCCAGCATCATCACAAGCATCACGTAAAAATT
GTAAAAATTCTTTAGTTGCACTGTATATGCCTCCTTCACCCTGGATGGGT
TCCACAAAAACTGCTGCAGTTTTACCAGGCTGAATCAATTTTCTGGTGGC
TTCTATATTTCCATACTCCACAAAATTGACTCCAGGCATGACAAGTTCAA
AAGGTGATCTATAGTGCTCTTTG
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