EY665652
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY665652 vs. ExPASy Swiss-Prot
Match: DHX36_HUMAN (Probable ATP-dependent RNA helicase DHX36 OS=Homo sapiens GN=DHX36 PE=1 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 7.419e-45 Identity = 89/151 (58.94%), Postives = 115/151 (76.16%), Query Frame = 2 Query: 47 GXDPLNKRWDLLXXXXFXRDXXKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGIWYRLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLL 499 G D ++ DLL + KF+IIPLHS++P+V Q +VFKR PPG RKI+++TNIAET+ITIDDVVYVID G++KE +D NN+ST+ + WVSKA+AKQR GRAGR Q G Y LY+ LRA+ L D+Q+PEI R P+EELCLQ+K+L Sbjct: 497 GWDNISTLHDLLMSQVMFKSD-KFLIIPLHSLMPTVNQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKIL 646
BLAST of EY665652 vs. ExPASy Swiss-Prot
Match: DHX36_MOUSE (Probable ATP-dependent RNA helicase DHX36 OS=Mus musculus GN=Dhx36 PE=2 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 1.653e-44 Identity = 88/151 (58.28%), Postives = 115/151 (76.16%), Query Frame = 2 Query: 47 GXDPLNKRWDLLXXXXFXRDXXKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGIWYRLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLL 499 G D ++ DLL + KF+IIPLHS++P+V Q +VFK+ PPG RKI+++TNIAET+ITIDDVVYVID G++KE +D NN+ST+ + WVSKA+AKQR GRAGR Q G Y LY+ LRA+ L D+Q+PEI R P+EELCLQ+K+L Sbjct: 490 GWDNISTLHDLLMSQVMFKSD-KFLIIPLHSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKIL 639
BLAST of EY665652 vs. ExPASy Swiss-Prot
Match: YTDC2_MOUSE (Probable ATP-dependent RNA helicase YTHDC2 OS=Mus musculus GN=Ythdc2 PE=2 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 7.948e-40 Identity = 80/142 (56.34%), Postives = 107/142 (75.35%), Query Frame = 2 Query: 95 FXRDXXKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGIWYRLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP-NCNI 517 F + ++ + LHS + + QKKV K PP G RKIILSTNIAET+IT++DVV+VIDSG++KEKS+D N V+ L+ W+SKASA QR GRAGRC+ GI +RL+S+LR ++ +FQ PE+ R+P++ELCL KLL P NC I Sbjct: 664 FADNTHRYQVFMLHSNMQTSDQKKVLKNPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQRKGRAGRCRPGICFRLFSRLRFQNMLEFQTPELLRMPLQELCLHTKLLAPVNCTI 805 HSP 2 Score: 23.8682 bits (50), Expect = 7.948e-40 Identity = 15/47 (31.91%), Postives = 22/47 (46.81%), Query Frame = 1 Query: 544 PPVSETIRNAIIVLQDIGGLPLDEKVPNLGEKLGCLSGPPIEGNKKL 684 PP + +RNA+ +L+ I + E + LG L L P G L Sbjct: 815 PPPALIVRNAVQMLKTIDAMDAWEDLTELGYHLADLPVEPHLGKMVL 861
BLAST of EY665652 vs. ExPASy Swiss-Prot
Match: YTDC2_HUMAN (Probable ATP-dependent RNA helicase YTHDC2 OS=Homo sapiens GN=YTHDC2 PE=1 SV=2) HSP 1 Score: 160.614 bits (405), Expect = 1.758e-39 Identity = 80/142 (56.34%), Postives = 106/142 (74.65%), Query Frame = 2 Query: 95 FXRDXXKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGIWYRLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP-NCNI 517 F ++ + LHS + + QKKV K PP G RKIILSTNIAET+IT++DVV+VIDSG++KEKS+D N V+ L+ W+SKASA QR GRAGRC+ GI +RL+S+LR ++ +FQ PE+ R+P++ELCL KLL P NC I Sbjct: 649 FADSTHRYQVFMLHSNMQTSDQKKVLKNPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQRKGRAGRCRPGICFRLFSRLRFQNMLEFQTPELLRMPLQELCLHTKLLAPVNCPI 790 HSP 2 Score: 23.8682 bits (50), Expect = 1.758e-39 Identity = 15/47 (31.91%), Postives = 22/47 (46.81%), Query Frame = 1 Query: 544 PPVSETIRNAIIVLQDIGGLPLDEKVPNLGEKLGCLSGPPIEGNKKL 684 PP + +RNA+ +L+ I + E + LG L L P G L Sbjct: 800 PPPALIVRNAVQMLKTIDAMDTWEDLTELGYHLADLPVEPHLGKMVL 846
BLAST of EY665652 vs. ExPASy Swiss-Prot
Match: DHX30_BOVIN (Putative ATP-dependent RNA helicase DHX30 OS=Bos taurus GN=DHX30 PE=2 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 2.057e-37 Identity = 69/131 (52.67%), Postives = 96/131 (73.28%), Query Frame = 2 Query: 113 KFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGIWYRLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP 505 K++I+P+HS +P + QK +F++PP G RKI+L+TNIAET+ITI+D+V+V+DSG KE+ YD VS L++ WVS+A+ QR GRAGRCQ+G Y L+ + R + FQVPEI R P+E L LQ K+ P Sbjct: 724 KYLILPVHSNIPMMDQKAIFQQPPIGVRKIVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMAPFQVPEILRTPLENLVLQAKIHMP 854 HSP 2 Score: 31.5722 bits (70), Expect = 2.057e-37 Identity = 15/49 (30.61%), Postives = 30/49 (61.22%), Query Frame = 1 Query: 517 LKILAEDINPPVSETIRNAIIVLQDIGGLPLDEKVPNLGEKLGCLSGPP 663 ++ L++ ++ P + + A+I+LQ+IG L E + LG++L +S P Sbjct: 859 VEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDP 907
BLAST of EY665652 vs. ExPASy Swiss-Prot
Match: DHX30_HUMAN (Putative ATP-dependent RNA helicase DHX30 OS=Homo sapiens GN=DHX30 PE=1 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 2.057e-37 Identity = 69/131 (52.67%), Postives = 96/131 (73.28%), Query Frame = 2 Query: 113 KFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGIWYRLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP 505 K++I+P+HS +P + QK +F++PP G RKI+L+TNIAET+ITI+D+V+V+DSG KE+ YD VS L++ WVS+A+ QR GRAGRCQ+G Y L+ + R + FQVPEI R P+E L LQ K+ P Sbjct: 698 KYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAKIHMP 828 HSP 2 Score: 31.5722 bits (70), Expect = 2.057e-37 Identity = 15/49 (30.61%), Postives = 30/49 (61.22%), Query Frame = 1 Query: 517 LKILAEDINPPVSETIRNAIIVLQDIGGLPLDEKVPNLGEKLGCLSGPP 663 ++ L++ ++ P + + A+I+LQ+IG L E + LG++L +S P Sbjct: 833 VEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDP 881
BLAST of EY665652 vs. ExPASy Swiss-Prot
Match: DHX30_MOUSE (Putative ATP-dependent RNA helicase DHX30 OS=Mus musculus GN=Dhx30 PE=2 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 3.490e-37 Identity = 68/131 (51.91%), Postives = 96/131 (73.28%), Query Frame = 2 Query: 113 KFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGIWYRLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP 505 K++I+P+HS +P + QK +F++PP G RKI+L+TNIAET+IT++D+V+V+DSG KE+ YD VS L++ WVS+A+ QR GRAGRCQ+G Y L+ + R + FQVPEI R P+E L LQ K+ P Sbjct: 721 KYLILPVHSNIPMMDQKAIFQQPPLGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAKIHMP 851 HSP 2 Score: 31.5722 bits (70), Expect = 3.490e-37 Identity = 15/49 (30.61%), Postives = 30/49 (61.22%), Query Frame = 1 Query: 517 LKILAEDINPPVSETIRNAIIVLQDIGGLPLDEKVPNLGEKLGCLSGPP 663 ++ L++ ++ P + + A+I+LQ+IG L E + LG++L +S P Sbjct: 856 VEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDP 904
BLAST of EY665652 vs. ExPASy Swiss-Prot
Match: DHX30_RAT (Putative ATP-dependent RNA helicase DHX30 OS=Rattus norvegicus GN=Dhx30 PE=2 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 3.491e-37 Identity = 68/131 (51.91%), Postives = 96/131 (73.28%), Query Frame = 2 Query: 113 KFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGIWYRLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP 505 K++I+P+HS +P + QK +F++PP G RKI+L+TNIAET+IT++D+V+V+DSG KE+ YD VS L++ WVS+A+ QR GRAGRCQ+G Y L+ + R + FQVPEI R P+E L LQ K+ P Sbjct: 698 KYLILPVHSNIPMMDQKAIFQQPPLGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAKIHMP 828 HSP 2 Score: 31.5722 bits (70), Expect = 3.491e-37 Identity = 15/49 (30.61%), Postives = 30/49 (61.22%), Query Frame = 1 Query: 517 LKILAEDINPPVSETIRNAIIVLQDIGGLPLDEKVPNLGEKLGCLSGPP 663 ++ L++ ++ P + + A+I+LQ+IG L E + LG++L +S P Sbjct: 833 VEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDP 881
BLAST of EY665652 vs. ExPASy Swiss-Prot
Match: DHX30_PONAB (Putative ATP-dependent RNA helicase DHX30 OS=Pongo abelii GN=DHX30 PE=2 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 7.717e-37 Identity = 68/131 (51.91%), Postives = 95/131 (72.52%), Query Frame = 2 Query: 113 KFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGIWYRLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP 505 K++I+P+HS +P + QK +F++PP G RKI+L+TNIAET+ TI+D+V+V+DSG KE+ YD VS L++ WVS+A+ QR GRAGRCQ+G Y L+ + R + FQVPEI R P+E L LQ K+ P Sbjct: 698 KYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLATNIAETSTTINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAKIHMP 828 HSP 2 Score: 31.5722 bits (70), Expect = 7.717e-37 Identity = 15/49 (30.61%), Postives = 30/49 (61.22%), Query Frame = 1 Query: 517 LKILAEDINPPVSETIRNAIIVLQDIGGLPLDEKVPNLGEKLGCLSGPP 663 ++ L++ ++ P + + A+I+LQ+IG L E + LG++L +S P Sbjct: 833 VEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTEP 881
BLAST of EY665652 vs. ExPASy Swiss-Prot
Match: DHX30_CHICK (Putative ATP-dependent RNA helicase DHX30 OS=Gallus gallus GN=DHX30 PE=2 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 1.832e-35 Identity = 67/131 (51.15%), Postives = 98/131 (74.81%), Query Frame = 2 Query: 113 KFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGIWYRLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDP 505 +++++P+HS +P + Q+ +F+RPPPG RKI+L+TNIAET+ITI+D+V+V+DSG KE+ YD VS L++ WVSK++ QR GRAGRCQ+G Y L+ + R +P +QVPEI R P+E L +Q K+ P Sbjct: 741 RYLVLPVHSNIPMMDQQNIFQRPPPGVRKIVLATNIAETSITINDIVHVVDSGTHKEERYDLKTKVSCLETVWVSKSNVVQRRGRAGRCQSGFAYHLFPRSRLDKMPTYQVPEILRTPLENLVVQAKIHMP 871 The following BLAST results are available for this feature:
BLAST of EY665652 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 81
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Sequences
The
following sequences are available for this feature:
EST sequence >EY665652 ID=EY665652; Name=EY665652; organism=Citrus sinensis; type=EST; length=867bpback to top |