EL492474
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EL492474 vs. ExPASy Swiss-Prot
Match: R27A2_ARATH (60S ribosomal protein L27a-2 OS=Arabidopsis thaliana GN=RPL27AB PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 2.880e-23 Identity = 46/56 (82.14%), Postives = 54/56 (96.43%), Query Frame = 3 Query: 3 GFFGKVGMRYFHKLRNKFHCPIVNVDKLWSMVPQEVKAKASKDNVPMIDVTQFGYF 170 G+FGKVGMRYFHKLRNKF CPIVN+DKLWS+VP++VKAK+SKDNVP+IDVTQ G+F Sbjct: 51 GYFGKVGMRYFHKLRNKFFCPIVNLDKLWSLVPEDVKAKSSKDNVPLIDVTQHGFF 106
BLAST of EL492474 vs. ExPASy Swiss-Prot
Match: R27A3_ARATH (60S ribosomal protein L27a-3 OS=Arabidopsis thaliana GN=RPL27AC PE=2 SV=2) HSP 1 Score: 105.916 bits (263), Expect = 6.416e-23 Identity = 45/56 (80.36%), Postives = 54/56 (96.43%), Query Frame = 3 Query: 3 GFFGKVGMRYFHKLRNKFHCPIVNVDKLWSMVPQEVKAKASKDNVPMIDVTQFGYF 170 G+FGKVGMRYFHKLRNKF CPIVN+DKLWS+VP++VKAK++KDNVP+IDVTQ G+F Sbjct: 51 GYFGKVGMRYFHKLRNKFFCPIVNLDKLWSLVPEDVKAKSTKDNVPLIDVTQHGFF 106
BLAST of EL492474 vs. ExPASy Swiss-Prot
Match: RL27A_OSCBR (60S ribosomal protein L27a OS=Oscheius brevesophaga GN=rpl-27a PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 1.213e-13 Identity = 31/56 (55.36%), Postives = 41/56 (73.21%), Query Frame = 3 Query: 3 GFFGKVGMRYFHKLRNKFHCPIVNVDKLWSMVPQEVKAKASKDNVPMIDVTQFGYF 170 G+FGKVGMR FH +N +CP VNVD+LW++VP+E K K S + P+ID + GYF Sbjct: 51 GYFGKVGMRVFHLNKNHHYCPTVNVDRLWALVPEEQKTKVSAEKAPVIDCVKAGYF 106
BLAST of EL492474 vs. ExPASy Swiss-Prot
Match: RL27A_DICDI (60S ribosomal protein L27a OS=Dictyostelium discoideum GN=rpl27a PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 3.529e-13 Identity = 29/59 (49.15%), Postives = 46/59 (77.97%), Query Frame = 3 Query: 3 GFFGKVGMRYFHKLRNKFHCPIVNVDKLWSMVPQEVKAKASKDN---VPMIDVTQFGYF 170 G+FGK+GMR+FH LRN++HCP V+++K+W++VP+ V+ + N P++DVTQ G+F Sbjct: 51 GYFGKLGMRHFHLLRNQYHCPTVSLEKIWTLVPESVRKSLAAKNDGTAPVVDVTQKGFF 109
BLAST of EL492474 vs. ExPASy Swiss-Prot
Match: RL27A_TETTH (60S ribosomal protein L27a OS=Tetrahymena thermophila GN=RPL27A PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.751e-12 Identity = 30/58 (51.72%), Postives = 43/58 (74.14%), Query Frame = 3 Query: 3 GFFGKVGMRYFHKLRNKFHCPIVNVDKLWSMVPQEVKAKASKD--NVPMIDVTQFGYF 170 G++GK+GMR FH +N HCP+VN+DKLWS+V + K ++D VP+IDVT+ G+F Sbjct: 53 GYYGKLGMRTFHLKKNPLHCPVVNIDKLWSLVSDATRQKYAEDKKKVPVIDVTKAGFF 110
BLAST of EL492474 vs. ExPASy Swiss-Prot
Match: RL27A_RAT (60S ribosomal protein L27a OS=Rattus norvegicus GN=Rpl27a PE=1 SV=3) HSP 1 Score: 67.0106 bits (162), Expect = 3.303e-11 Identity = 28/59 (47.46%), Postives = 43/59 (72.88%), Query Frame = 3 Query: 3 GFFGKVGMRYFHKLRNKFHCPIVNVDKLWSMVPQEVKAKASKDN---VPMIDVTQFGYF 170 G+FGKVGMR++H RN+ CP VN+DKLW++V ++ + A+K+ P+IDV + GY+ Sbjct: 51 GYFGKVGMRHYHLKRNQSFCPTVNLDKLWTLVSEQTRVNAAKNKNGVAPIIDVVRSGYY 109
BLAST of EL492474 vs. ExPASy Swiss-Prot
Match: RL27A_MACFA (60S ribosomal protein L27a OS=Macaca fascicularis GN=RPL27A PE=2 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 3.303e-11 Identity = 28/59 (47.46%), Postives = 43/59 (72.88%), Query Frame = 3 Query: 3 GFFGKVGMRYFHKLRNKFHCPIVNVDKLWSMVPQEVKAKASKDN---VPMIDVTQFGYF 170 G+FGKVGMR++H RN+ CP VN+DKLW++V ++ + A+K+ P+IDV + GY+ Sbjct: 51 GYFGKVGMRHYHLKRNQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRSGYY 109
BLAST of EL492474 vs. ExPASy Swiss-Prot
Match: RL27A_BOVIN (60S ribosomal protein L27a OS=Bos taurus GN=RPL27A PE=2 SV=3) HSP 1 Score: 67.0106 bits (162), Expect = 3.303e-11 Identity = 28/59 (47.46%), Postives = 43/59 (72.88%), Query Frame = 3 Query: 3 GFFGKVGMRYFHKLRNKFHCPIVNVDKLWSMVPQEVKAKASKDN---VPMIDVTQFGYF 170 G+FGKVGMR++H RN+ CP VN+DKLW++V ++ + A+K+ P+IDV + GY+ Sbjct: 51 GYFGKVGMRHYHLKRNQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRSGYY 109
BLAST of EL492474 vs. ExPASy Swiss-Prot
Match: RL27A_PONAB (60S ribosomal protein L27a OS=Pongo abelii GN=RPL27A PE=2 SV=3) HSP 1 Score: 65.855 bits (159), Expect = 7.358e-11 Identity = 27/59 (45.76%), Postives = 43/59 (72.88%), Query Frame = 3 Query: 3 GFFGKVGMRYFHKLRNKFHCPIVNVDKLWSMVPQEVKAKASKDN---VPMIDVTQFGYF 170 G+FGKVGM+++H RN+ CP VN+DKLW++V ++ + A+K+ P+IDV + GY+ Sbjct: 51 GYFGKVGMKHYHLKRNQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRSGYY 109
BLAST of EL492474 vs. ExPASy Swiss-Prot
Match: RL27A_PANTR (60S ribosomal protein L27a OS=Pan troglodytes GN=RPL27A PE=2 SV=3) HSP 1 Score: 65.855 bits (159), Expect = 7.358e-11 Identity = 27/59 (45.76%), Postives = 43/59 (72.88%), Query Frame = 3 Query: 3 GFFGKVGMRYFHKLRNKFHCPIVNVDKLWSMVPQEVKAKASKDN---VPMIDVTQFGYF 170 G+FGKVGM+++H RN+ CP VN+DKLW++V ++ + A+K+ P+IDV + GY+ Sbjct: 51 GYFGKVGMKHYHLKRNQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRSGYY 109 The following BLAST results are available for this feature:
BLAST of EL492474 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
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Sequences
The
following sequences are available for this feature:
EST sequence >EL492474 ID=EL492474; Name=EL492474; organism=Citrus sinensis; type=EST; length=185bpback to top |