CV886990
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV886990 vs. ExPASy Swiss-Prot
Match: HDDC2_HUMAN (HD domain-containing protein 2 OS=Homo sapiens GN=HDDC2 PE=1 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 1.742e-41 Identity = 85/160 (53.12%), Postives = 116/160 (72.50%), Query Frame = -1 Query: 106 IDFLSLCHRLKTTKRAGWVKRNVNNPESIADHMYRMGLMGLIMADIPGIDRDKCIKMAIVHDIAEAIVGDITPSDGIPKEEKSQREREAITYMCKLLGQGARAKEIDELWMEYEENSTAEAKIVKDFDKAEMILQAVEYENEQGKD--LEEFFQSTAGKF 579 + FL L +LK R GWV RNV PES++DHMYRM +M +++ D +++D+C+++A+VHD+AE IVGDI P+D IPKEEK +RE EA+ + +LL + R KE+ ELW EYE S+AEAK VK D+ EMILQA EYE+ + K L++F+ STAGKF Sbjct: 18 LQFLRLVGQLKRVPRTGWVYRNVQRPESVSDHMYRMAVMAMVIKD-DRLNKDRCVRLALVHDMAECIVGDIAPADNIPKEEKHRREEEAMKQITQLLPEDLR-KELYELWEEYETQSSAEAKFVKQLDQCEMILQASEYEDLEHKPGRLQDFYDSTAGKF 175
BLAST of CV886990 vs. ExPASy Swiss-Prot
Match: HDDC2_BOVIN (HD domain-containing protein 2 OS=Bos taurus GN=HDDC2 PE=2 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 6.620e-41 Identity = 83/160 (51.88%), Postives = 115/160 (71.88%), Query Frame = -1 Query: 106 IDFLSLCHRLKTTKRAGWVKRNVNNPESIADHMYRMGLMGLIMADIPGIDRDKCIKMAIVHDIAEAIVGDITPSDGIPKEEKSQREREAITYMCKLLGQGARAKEIDELWMEYEENSTAEAKIVKDFDKAEMILQAVEYENEQGKD--LEEFFQSTAGKF 579 + FL L +LK R GWV RNV PES++DHMYRM +M L+ D +++D+C+++A+VHD+AE IVGDI P+D +P+EEK +RE EA+ + +LL + + KE+ ELW EYE S+AEAK VK D+ EMILQA EYE+ + K L++F+ STAGKF Sbjct: 19 LQFLRLVGQLKRVPRTGWVYRNVQKPESVSDHMYRMAVMALVTKD-EHLNKDRCVRLALVHDMAECIVGDIAPADNVPREEKHRREEEAMKQLTQLLPEDLQ-KELYELWEEYETQSSAEAKFVKQLDQCEMILQASEYEDLENKPGRLQDFYDSTAGKF 176
BLAST of CV886990 vs. ExPASy Swiss-Prot
Match: HDDC2_MOUSE (HD domain-containing protein 2 OS=Mus musculus GN=Hddc2 PE=2 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 8.646e-41 Identity = 85/158 (53.80%), Postives = 113/158 (71.52%), Query Frame = -1 Query: 106 FLSLCHRLKTTKRAGWVKRNVNNPESIADHMYRMGLMGLIMADIPGIDRDKCIKMAIVHDIAEAIVGDITPSDGIPKEEKSQREREAITYMCKLLGQGARAKEIDELWMEYEENSTAEAKIVKDFDKAEMILQAVEYENEQGKD--LEEFFQSTAGKF 573 FL L +LK R GWV RNV PES++DHMYRM +M ++ D +++D+CI++A+VHD+AE IVGDI P+D IPKEEK +RE EA+ + +LL + R KE+ ELW EYE S+ EAK VK D+ EMILQA EYE+ + K L++F+ STAGKF Sbjct: 15 FLRLVGQLKRVPRTGWVYRNVEKPESVSDHMYRMAVMAMVTRD-DRLNKDRCIRLALVHDMAECIVGDIAPADNIPKEEKHRREEEAMKQITQLLPEDLR-KELYELWEEYETQSSEEAKFVKQLDQCEMILQASEYEDLENKPGRLQDFYDSTAGKF 170
BLAST of CV886990 vs. ExPASy Swiss-Prot
Match: HDDC2_DANRE (HD domain-containing protein 2 OS=Danio rerio GN=hddc2 PE=2 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 1.129e-40 Identity = 90/197 (45.69%), Postives = 125/197 (63.45%), Query Frame = -1 Query: 19 IDFLSLCHRLKTTKRAGWVKRNVNNPESIADHMYRMGLMGLIMADIPGIDRDKCIKMAIVHDIAEAIVGDITPSDGIPKEEKSQREREAITYMCKLLGQGARAKEIDELWMEYEENSTAEAKIVKDFDKAEMILQAVEYENEQGKD--LEEFFQSTAGKFQ--------TELGKAWAAEIVSRRKK*TNFHKKTLVK 579 + F+ L +LK R GWV RN+ PES++DHMYRM +M L + DI +++++C+K+A+VHD+AE IVGDI P+D + K EK +RE++A+ ++ LL G R KEI LW EYE S+ EAK+VK+ D EMI+QA EYE +GK L+EFF ST GKF L + A I + +K T+ TL K Sbjct: 5 LQFMKLVGQLKRVPRTGWVYRNIKQPESVSDHMYRMSMMALTIQDI-SVNKERCMKLALVHDLAECIVGDIAPADNVSKAEKHRREKDAMVHITGLLDDGLR-KEIYNLWEEYETQSSPEAKLVKELDNLEMIIQAHEYEELEGKPGRLQEFFVSTEGKFHHPEVLGLLKSLNEERARHIAAGGEKTTDTDSLTLAK 199
BLAST of CV886990 vs. ExPASy Swiss-Prot
Match: HDDC2_DICDI (HD domain-containing protein 2 homolog OS=Dictyostelium discoideum GN=hddc2 PE=3 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 4.291e-40 Identity = 94/187 (50.27%), Postives = 115/187 (61.50%), Query Frame = -1 Query: 55 IDFLSLCHRLKTTKRAGWVKRNVNNPESIADHMYRMGLMG-------LIMADIPGIDRDKCIKMAIVHDIAEAIVGDITPSDGIPKEEKSQREREAITYMCKLLGQGARAKEIDELWMEYEENSTAEAKIVKDFDKAEMILQAVEYEN-----EQGKDLEEFFQSTAGKFQTELGKAWAAEIVSRRK 579 ++F +C +LKT KR GWV V PES++DHMYRM +MG LI D ID+ K IKMA+VHD+ E++VGD TP D I KEEK Q E+ AI + L G KEI +LW EYE+ T EA +VKDFDK EMILQA EYE E L+ FF ST GKF L K+ A ++ S RK Sbjct: 5 LEFFKICGKLKTLKRTGWVNHGVELPESVSDHMYRMAMMGMCLDKKELIGEDGKEIDKMKIIKMALVHDLGESLVGDFTPHDKITKEEKYQLEKNAIIEITNTL-SGEVGKEIFDLWQEYEDCKTNEALLVKDFDKFEMILQAYEYEKQPHQLENKIKLQSFFDSTRGKFHHPLFKSLALQLESDRK 190
BLAST of CV886990 vs. ExPASy Swiss-Prot
Match: YC0H_SCHPO (HD domain-containing protein C4G3.17 OS=Schizosaccharomyces pombe GN=SPCC4G3.17 PE=2 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 8.947e-38 Identity = 87/182 (47.80%), Postives = 118/182 (64.84%), Query Frame = -1 Query: 52 IDFLSLCHRLKTTKRAGWVKRNVNNPESIADHMYRMGLMGLIMADIPGIDRDKCIKMAIVHDIAEAIVGDITPSDGIPKEEKSQREREA---ITYMCKLLGQGARAKEIDELWMEYEENSTAEAKIVKDFDKAEMILQAVEYENEQG--KDLEEFFQSTAGK-FQTELGKAWAAEIVSRRKK 579 + FL RLKTT R GW+ + PESIADHMYRMG++ ++ D P I++++C+K+A+VHD+AE+IVGDITP + + KEEK + E EA IT L +A+EI EL++EYE ST EAK VKD DK EMI Q EYE + KDL +F + AGK Q L K W +++ R++ Sbjct: 10 VPFLDCLSRLKTTPRTGWLYHGIEKPESIADHMYRMGILTMLCND-PSINKERCLKIAVVHDMAESIVGDITPHENVSKEEKHRMESEAMVSITQQLIPLNLSLQAEEIKELFLEYESASTPEAKFVKDIDKFEMIAQMFEYERKFNGEKDLSQF--TWAGKLIQHPLVKGWLNDVLQEREQ 188
BLAST of CV886990 vs. ExPASy Swiss-Prot
Match: HDDC2_XENLA (HD domain-containing protein 2 OS=Xenopus laevis GN=hddc2 PE=2 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 8.947e-38 Identity = 76/161 (47.20%), Postives = 113/161 (70.19%), Query Frame = -1 Query: 103 IDFLSLCHRLKTTKRAGWVKRNVNNPESIADHMYRMGLMGLIMADIPGIDRDKCIKMAIVHDIAEAIVGDITPSDGIPKEEKSQREREAITYMCKLLGQGARAKEIDELWMEYEENSTAEAKIVKDFDKAEMILQAVEYENEQGKD--LEEFFQSTAGKFQ 579 + F+ L +LK R GW+ R V PES++DHMYRM +M ++ D +++D+CI++A+VHD+AE IVGDI P+D I KEEK ++E+ A+ ++ +LL + E+ +LW EYE TAEAK VK+ D+ EMILQA+EYE + + L++F+ STAGKF+ Sbjct: 15 LQFMKLVGQLKRVPRTGWIYRQVEKPESVSDHMYRMAVMAMLTEDRK-LNKDRCIRLALVHDMAECIVGDIAPADNIAKEEKHRKEKAAMEHLTQLLPDNLKT-EVYDLWEEYEHQFTAEAKFVKELDQCEMILQALEYEELEKRPGRLQDFYNSTAGKFK 173
BLAST of CV886990 vs. ExPASy Swiss-Prot
Match: YB92_YEAST (HD domain-containing protein YBR242W OS=Saccharomyces cerevisiae GN=YBR242W PE=1 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 4.595e-34 Identity = 76/179 (42.46%), Postives = 118/179 (65.92%), Query Frame = -1 Query: 52 FLSLCHRLKTTKRAGWVKRNVNNPESIADHMYRMGLMGLIMADIPGIDRDKCIKMAIVHDIAEAIVGDITPSDGIPKEEKSQREREAITYMCKLL---GQGARAKEIDELWMEYEENSTAEAKIVKDFDKAEMILQAVEYENEQ--GKDLEEFFQSTAGKFQTELGKAWAAEIVSRRKK 573 FL++ +LK +R G++ + ESI+DHMYR+ ++ +++ D ++RDKC+++A+VHDIAE++VGDITP D I KEEK +RE E I Y+C L AKEI + W+ YE ++ EA+ VKD DK EM++Q EYE E K+ ++FF + A +T+ K W +++V +R+K Sbjct: 51 FLNVVQQLKIQRRTGYLDLGIKECESISDHMYRLSIITMLIKD-SRVNRDKCVRIALVHDIAESLVGDITPVDPIGKEEKHRREWETIKYLCNALIKPYNEIAAKEIMDDWLAYENVTSLEARYVKDIDKYEMLVQCFEYEREYKGTKNFDDFFGAVA-SIKTDEVKGWTSDLVVQRQK 227
BLAST of CV886990 vs. ExPASy Swiss-Prot
Match: YGK1_YEAST (HD domain-containing protein YGL101W OS=Saccharomyces cerevisiae GN=YGL101W PE=1 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 7.838e-34 Identity = 73/178 (41.01%), Postives = 114/178 (64.04%), Query Frame = -1 Query: 55 FLSLCHRLKTTKRAGWVKRNVNNPESIADHMYRMGLMGLIMADIPGIDRDKCIKMAIVHDIAEAIVGDITPSDGIPKEEKSQREREAITYMCKLL---GQGARAKEIDELWMEYEENSTAEAKIVKDFDKAEMILQAVEYENEQG--KDLEEFFQSTAGKFQTELGKAWAAEIVSRRK 573 FL++ LKT +R GWV ++ ESI+DHMYRMGL +++ D +DR+KCI++A+VHD AE++VGDITP+D + KEEK +RE E + Y+C+ + + ++EI + W+ YE+ + E + VKD DK EM++Q EYE + KDL++F +T+ K W ++ R+ Sbjct: 32 FLNIIQLLKTQRRTGWVDHGIDPCESISDHMYRMGLTTMLITD-KNVDRNKCIRIALVHDFAESLVGDITPNDPMTKEEKHRREFETVKYLCESIIRPCSESASREILDDWLAYEKQTCLEGRYVKDIDKYEMLVQCFEYEQKYNGKKDLKQFL-GAINDIKTDEVKKWTQSLLEDRQ 207 The following BLAST results are available for this feature:
BLAST of CV886990 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CV886990 ID=CV886990; Name=CV886990; organism=Citrus sinensis; type=EST; length=639bpback to top |