EY665646

Overview
NameEY665646
Unique NameEY665646
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length854
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665646 vs. ExPASy Swiss-Prot
Match: CHMU_ARATH (Chorismate mutase, chloroplastic OS=Arabidopsis thaliana GN=CM1 PE=2 SV=2)

HSP 1 Score: 227.639 bits (579), Expect = 6.751e-59
Identity = 107/192 (55.73%), Postives = 144/192 (75.00%), Query Frame = 2
Query:  149 LTLDLVRDSLIRQEDTIIFCLIERAKHPLNAPAYDQSYASFPGFSGSLLQYIVQQSEAMQATAGRYENPEESPFFPDKLPHSFVPPFKYPQVLHPAGTSINKNKIIWDMYFNQLLPLFVAEGDDGNYASTATSDLACLQALSRRIHYGKFVAEVKFRDAPHEYELAIRAKDRDALMNLLTYENVEQMVEKKI 724
            LTL+ +R+SLIRQED+IIF L+ERAK+  NA  YD +     GF+GSL++Y+V+ +E + A  GR+++P+E PFFPD LP   +PP +YP+VLH A  SIN NK IW+MYF  L+P  V +GDDGNY STA  D  CLQ LS+RIHYGKFVAE KF+ +P  YE AI+A+D+DALM++LT+  VE  ++K++
Sbjct:   80 LTLEGIRNSLIRQEDSIIFGLLERAKYCYNADTYDPTAFDMDGFNGSLVEYMVKGTEKLHAKVGRFKSPDEHPFFPDDLPEPMLPPLQYPKVLHFAADSININKKIWNMYFRDLVPRLVKKGDDGNYGSTAVCDAICLQCLSKRIHYGKFVAEAKFQASPEAYESAIKAQDKDALMDMLTFPTVEDAIKKRV 271          
BLAST of EY665646 vs. ExPASy Swiss-Prot
Match: CHMU_YEAST (Chorismate mutase OS=Saccharomyces cerevisiae GN=ARO7 PE=1 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 6.148e-36
Identity = 79/201 (39.30%), Postives = 119/201 (59.20%), Query Frame = 2
Query:  149 LTLDLVRDSLIRQEDTIIFCLIERAKHPLNAPAYDQSYASF--PGFSGSLLQYIVQQSEAMQATAGRYENPEESPFFPDKLPHSFVPPFKYPQVLHPAGTSINKNKIIWDMYFNQLLPLF-VAEGDD-GNYASTATSDLACLQALSRRIHYGKFVAEVKFRDAPHEYELAIRAKDRDALMNLLTYENVEQMVEKKIGKEGD 739
            L L  +RD L+R ED+IIF  IER+        Y+ ++     P F GS L + +   E   +   R+E+P+E+PFFPDK+  SF+P   YPQ+L P    +N N  I  +Y  +++PL    +GDD  N+ S AT D+ CLQ+LSRRIH+GKFVAE KF+     Y   I++KD + +M  +T   VE+ + +++ K+ +
Sbjct:   10 LNLQNIRDELVRMEDSIIFKFIERSHFATCPSVYEANHPGLEIPNFKGSFLDWALSNLEIAHSRIRRFESPDETPFFPDKIQKSFLPSINYPQILAPYAPEVNYNDKIKKVYIEKIIPLISKRDGDDKNNFGSVATRDIECLQSLSRRIHFGKFVAEAKFQSDIPLYTKLIKSKDVEGIMKNITNSAVEEKILERLTKKAE 210          
BLAST of EY665646 vs. ExPASy Swiss-Prot
Match: CHMU_SCHPO (Probable chorismate mutase OS=Schizosaccharomyces pombe GN=SPAC16E8.04c PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 6.363e-33
Identity = 80/196 (40.82%), Postives = 112/196 (57.14%), Query Frame = 2
Query:  149 LTLDLVRDSLIRQEDTIIFCLIERAKHPLNAPAYD---QSYASFPGFSGSLLQYIVQQSEAMQATAGRYENPEESPFFPDKLPHSFVPPFKYPQVLHPAGTSINKNKIIWDMYFNQLLPLFVAEGDD-GNYASTATSDLACLQALSRRIHYGKFVAEVKFRDAPHEYELAIRAKDRDALMNLLTYENVEQMVEKKI 724
            L L+ +R +LIRQEDTIIF  +ERA+ P N   Y    +   +   + GS L Y++ + E + A   RY +PEE PF  D LP   +P F     LHP   ++N N  I + Y N+++P   + GDD  NY ST   D+ CLQ+LSRRIHYGKFVAE K+   P +Y+  I A+D   + N +     E+ V K++
Sbjct:    8 LKLENIRSALIRQEDTIIFNFLERAQFPRNEKVYKSGKEGCLNLENYDGSFLNYLLHEEEKVYALVRRYASPEEYPF-TDNLPEPILPKFSGKFPLHP--NNVNVNSEILEYYINEIVPKISSPGDDFDNYGSTVVCDIRCLQSLSRRIHYGKFVAEAKYLANPEKYKKLILARDIKGIENEIVDAAQEERVLKRL 200          
The following BLAST results are available for this feature:
BLAST of EY665646 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
CHMU_ARATH6.751e-5955.73Chorismate mutase, chloroplastic OS=Arabidopsis th... [more]
CHMU_YEAST6.148e-3639.30Chorismate mutase OS=Saccharomyces cerevisiae GN=A... [more]
CHMU_SCHPO6.363e-3340.82Probable chorismate mutase OS=Schizosaccharomyces ... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-102-092-A04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665646 ID=EY665646; Name=EY665646; organism=Citrus sinensis; type=EST; length=854bp
AACGATTACTATCAATCTATCTCTTTCTTTTGTGTTTATTTTCTCATTTT
GTTTATTGAGGATTCTCTATTTTGCATTGAGAATGTTTTTGGTTGTGTTG
ATAGTTGTAGTCCTTGTAGTAGAGAACAAGATGGCATTGGCAGGGGATTT
AACGCTTGACTTGGTGAGGGACTCATTGATTAGGCAAGAAGATACCATTA
TATTCTGTCTCATTGAGAGAGCTAAGCACCCTCTTAATGCTCCAGCTTAT
GATCAATCTTATGCTTCATTTCCTGGCTTCTCTGGTTCTTTGCTTCAATA
CATTGTTCAACAATCAGAGGCCATGCAAGCCACAGCTGGGAGATATGAGA
ATCCAGAAGAAAGTCCCTTCTTCCCTGATAAACTGCCGCATTCATTTGTA
CCGCCTTTCAAATATCCGCAGGTTTTGCATCCTGCAGGGACTTCGATCAA
CAAAAATAAGATCATATGGGATATGTACTTCAACCAATTGCTTCCGCTTT
TTGTTGCTGAGGGTGATGATGGCAACTATGCATCAACTGCCACTAGCGAT
CTTGCCTGTCTACAGGCTCTCTCTAGAAGGATACATTATGGGAAATTCGT
AGCCGAGGTTAAATTCAGGGATGCCCCACATGAATATGAACTTGCAATTC
GTGCTAAGGACAGAGATGCTCTGATGAATCTATTAACATATGAGAATGTA
GAACAGATGGTGGAGAAGAAGATTGGAAAAGAAGGCGATGGGTCTCGGGG
CAAGAATGAACCTCCGCAATGGACGGCGACAAGCAAGGCGAGGTTCAAAG
TGGATCCCTTCTGGTATTTTCAAAACTCTATGGAAAATTGGATTCTTGCC
CTTT
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