CV886975

Overview
NameCV886975
Unique NameCV886975
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length873
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV886975 vs. ExPASy Swiss-Prot
Match: AAKG1_RAT (5'-AMP-activated protein kinase subunit gamma-1 OS=Rattus norvegicus GN=Prkag1 PE=1 SV=3)

HSP 1 Score: 104.76 bits (260), Expect = 6.835e-22
Identity = 82/267 (30.71%), Postives = 124/267 (46.44%), Query Frame = 3
Query:    3 THTAYELLPESGKVVALDIDLPVKQAFHILYEQGISMAPLWDFSKARFVGVLSASDFILILRELGNHGSNLTE-EELETHTISAWKEGKAYLNRQIDSHGKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIPVGTWVPKIGEP----NRRPLAMLRPXXXXXXXXXXXXXXXXXSIPIVDDNDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQ 788
            +H  Y+L+P S K+V  D  L VK+AF  L   G+  APLWD  K  FVG+L+ +DFI IL     + S L +  ELE H I  W+E   YL            +PLV   PN +L D    ++ N++  +P+I   S +      L+I +   ILK               LKL I   P   ++ K  E         +AM+R                  ++P+VD+   ++DIY + D+  LA +K Y ++++S   + +ALQ
Sbjct:   34 SHRCYDLIPTSSKLVVFDTSLQVKKAFFALVTNGVRAAPLWDSKKQSFVGMLTITDFINILHRY--YKSALVQIYELEEHKIETWRE--VYLQDSF--------KPLVCISPNASLFDAVSSLIRNKIHRLPVIDPESGN-----TLYILTHKRILK--------------FLKLFITEFPKPEFMSKSLEELQIGTYANIAMVRTTTPVYVALGIFVQHRVSALPVVDEKGRVVDIYSKFDVINLAAEKTYNNLDVS---VTKALQ 266          
BLAST of CV886975 vs. ExPASy Swiss-Prot
Match: AAKG1_PIG (5'-AMP-activated protein kinase subunit gamma-1 OS=Sus scrofa GN=PRKAG1 PE=1 SV=2)

HSP 1 Score: 104.76 bits (260), Expect = 6.835e-22
Identity = 82/267 (30.71%), Postives = 124/267 (46.44%), Query Frame = 3
Query:    3 THTAYELLPESGKVVALDIDLPVKQAFHILYEQGISMAPLWDFSKARFVGVLSASDFILILRELGNHGSNLTE-EELETHTISAWKEGKAYLNRQIDSHGKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIPVGTWVPKIGEP----NRRPLAMLRPXXXXXXXXXXXXXXXXXSIPIVDDNDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQ 788
            +H  Y+L+P S K+V  D  L VK+AF  L   G+  APLWD  K  FVG+L+ +DFI IL     + S L +  ELE H I  W+E   YL            +PLV   PN +L D    ++ N++  +P+I   S +      L+I +   ILK               LKL I   P   ++ K  E         +AM+R                  ++P+VD+   ++DIY + D+  LA +K Y ++++S   + +ALQ
Sbjct:   35 SHRCYDLIPTSSKLVVFDTSLQVKKAFFALVTNGVRAAPLWDSKKQSFVGMLTITDFINILHRY--YKSALVQIYELEEHKIETWRE--VYLQDSF--------KPLVCISPNASLFDAVSSLIRNKIHRLPVIDPESGN-----TLYILTHKRILK--------------FLKLFITEFPKPEFMSKSLEELQIGTYANIAMVRTTTPVYVALGIFVQHRVSALPVVDEKGRVVDIYSKFDVINLAAEKTYNNLDVS---VTKALQ 267          
BLAST of CV886975 vs. ExPASy Swiss-Prot
Match: AAKG1_HUMAN (5'-AMP-activated protein kinase subunit gamma-1 OS=Homo sapiens GN=PRKAG1 PE=1 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 6.835e-22
Identity = 82/267 (30.71%), Postives = 124/267 (46.44%), Query Frame = 3
Query:    3 THTAYELLPESGKVVALDIDLPVKQAFHILYEQGISMAPLWDFSKARFVGVLSASDFILILRELGNHGSNLTE-EELETHTISAWKEGKAYLNRQIDSHGKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIPVGTWVPKIGEP----NRRPLAMLRPXXXXXXXXXXXXXXXXXSIPIVDDNDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQ 788
            +H  Y+L+P S K+V  D  L VK+AF  L   G+  APLWD  K  FVG+L+ +DFI IL     + S L +  ELE H I  W+E   YL            +PLV   PN +L D    ++ N++  +P+I   S +      L+I +   ILK               LKL I   P   ++ K  E         +AM+R                  ++P+VD+   ++DIY + D+  LA +K Y ++++S   + +ALQ
Sbjct:   35 SHRCYDLIPTSSKLVVFDTSLQVKKAFFALVTNGVRAAPLWDSKKQSFVGMLTITDFINILHRY--YKSALVQIYELEEHKIETWRE--VYLQDSF--------KPLVCISPNASLFDAVSSLIRNKIHRLPVIDPESGN-----TLYILTHKRILK--------------FLKLFITEFPKPEFMSKSLEELQIGTYANIAMVRTTTPVYVALGIFVQHRVSALPVVDEKGRVVDIYSKFDVINLAAEKTYNNLDVS---VTKALQ 267          
BLAST of CV886975 vs. ExPASy Swiss-Prot
Match: AAKG1_BOVIN (5'-AMP-activated protein kinase subunit gamma-1 OS=Bos taurus GN=PRKAG1 PE=2 SV=2)

HSP 1 Score: 104.76 bits (260), Expect = 6.835e-22
Identity = 82/267 (30.71%), Postives = 124/267 (46.44%), Query Frame = 3
Query:    3 THTAYELLPESGKVVALDIDLPVKQAFHILYEQGISMAPLWDFSKARFVGVLSASDFILILRELGNHGSNLTE-EELETHTISAWKEGKAYLNRQIDSHGKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIPVGTWVPKIGEP----NRRPLAMLRPXXXXXXXXXXXXXXXXXSIPIVDDNDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQ 788
            +H  Y+L+P S K+V  D  L VK+AF  L   G+  APLWD  K  FVG+L+ +DFI IL     + S L +  ELE H I  W+E   YL            +PLV   PN +L D    ++ N++  +P+I   S +      L+I +   ILK               LKL I   P   ++ K  E         +AM+R                  ++P+VD+   ++DIY + D+  LA +K Y ++++S   + +ALQ
Sbjct:   35 SHRCYDLIPTSSKLVVFDTSLQVKKAFFALVTNGVRAAPLWDSKKQSFVGMLTITDFINILHRY--YKSALVQIYELEEHKIETWRE--VYLQDSF--------KPLVCISPNASLFDAVSSLIRNKIHRLPVIDPESGN-----TLYILTHKRILK--------------FLKLFITEFPKPEFMSKSLEELQIGTYANIAMVRTTTPVYVALGIFVQHRVSALPVVDEKGRVVDIYSKFDVINLAAEKTYNNLDVS---VTKALQ 267          
BLAST of CV886975 vs. ExPASy Swiss-Prot
Match: AAKG1_MOUSE (5'-AMP-activated protein kinase subunit gamma-1 OS=Mus musculus GN=Prkag1 PE=2 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 8.927e-22
Identity = 77/263 (29.28%), Postives = 124/263 (47.15%), Query Frame = 3
Query:    3 THTAYELLPESGKVVALDIDLPVKQAFHILYEQGISMAPLWDFSKARFVGVLSASDFILILRELGNHGSNLTE-EELETHTISAWKEGKAYLNRQIDSHGKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIPVGTWVPKIGEPNRRPLAMLRPXXXXXXXXXXXXXXXXXSIPIVDDNDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQ 788
            +H  Y+L+P S K+V  D  L VK+AF  L   G+  APLWD  K  FVG+L+ +DFI IL     + S L +  ELE H I  W+E   YL            +PLV   PN +L D    ++ N++  +P+I   S +      L+I +   ILK +  +          +   +  + +GT+           +AM+R                  ++P+VD+   ++DIY + D+  LA +K Y ++++S   + +ALQ
Sbjct:   34 SHRCYDLIPTSSKLVVFDTSLQVKKAFFALVTNGVRAAPLWDSKKQSFVGMLTITDFINILHRY--YKSALVQIYELEEHKIETWRE--VYLQDSF--------KPLVCISPNASLFDAVSSLIRNKIHRLPVIDPESGN-----TLYILTHKRILKFLKLFITEFPKP-EFMSKSLQELQIGTYA---------NIAMVRTTTPVYVALGIFVQHRVSALPVVDEKGRVVDIYSKFDVINLAAEKTYNNLDVS---VTKALQ 266          
BLAST of CV886975 vs. ExPASy Swiss-Prot
Match: AAKG2_PONAB (5'-AMP-activated protein kinase subunit gamma-2 OS=Pongo abelii GN=PRKAG2 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.597e-21
Identity = 76/263 (28.90%), Postives = 125/263 (47.53%), Query Frame = 3
Query:    3 THTAYELLPESGKVVALDIDLPVKQAFHILYEQGISMAPLWDFSKARFVGVLSASDFILILRELGNHGSNLTE-EELETHTISAWKEGKAYLNRQIDSHGKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIPVGTWVPKIGEPNRRPLAMLRPXXXXXXXXXXXXXXXXXSIPIVDDNDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQ 788
            +H  Y+++P S K+V  D  L VK+AF  L   G+  APLW+  K  FVG+L+ +DFI IL     + S + +  ELE H I  W+E   YL            +PLV   P+ +L D    ++ N++  +P+I   S +      L+I +   ILK + + F         +K  +  + +GT+           +A + P                 ++P+VD++  ++DIY + D+  LA +K Y   N  ++T+ QALQ
Sbjct:  222 SHKCYDIVPTSSKLVVFDTTLQVKKAFFALVANGVRAAPLWESKKQSFVGMLTITDFINILHRY--YKSPMVQIYELEEHKIETWRE--LYLQETF--------KPLVNISPDASLLDAVYSLIKNKIHRLPVIDPISGNA-----LYILTHKRILKFL-QLFMSDMPKPAFMKQNLDELGIGTY---------HNIAFIHPDTPIIKALNIFVERRISALPVVDESGKVVDIYSKFDVINLAAEKTY---NNLDITVTQALQ 454          
BLAST of CV886975 vs. ExPASy Swiss-Prot
Match: AAKG2_MOUSE (5'-AMP-activated protein kinase subunit gamma-2 OS=Mus musculus GN=Prkag2 PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.392e-21
Identity = 76/263 (28.90%), Postives = 125/263 (47.53%), Query Frame = 3
Query:    3 THTAYELLPESGKVVALDIDLPVKQAFHILYEQGISMAPLWDFSKARFVGVLSASDFILILRELGNHGSNLTE-EELETHTISAWKEGKAYLNRQIDSHGKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIPVGTWVPKIGEPNRRPLAMLRPXXXXXXXXXXXXXXXXXSIPIVDDNDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQ 788
            +H  Y+++P S K+V  D  L VK+AF  L   G+  APLW+  K  FVG+L+ +DFI IL     + S + +  ELE H I  W+E   YL            +PLV   P+ +L D    ++ N++  +P+I   S +      L+I +   ILK + + F         +K  +  + +GT+           +A + P                 ++P+VD++  ++DIY + D+  LA +K Y   N  ++T+ QALQ
Sbjct:  264 SHKCYDIVPTSSKLVVFDTTLQVKKAFFALVANGVRAAPLWESKKQSFVGMLTITDFINILHRY--YKSPMVQIYELEEHKIETWRE--LYLQETF--------KPLVNISPDASLFDAVYSLIKNKIHRLPVIDPISGNA-----LYILTHKRILKFL-QLFMSDMPKPAFMKQNLDELGIGTY---------HNIAFIHPDTPIIKALNIFVERRISALPVVDESGKVVDIYSKFDVINLAAEKTY---NNLDITVTQALQ 496          
BLAST of CV886975 vs. ExPASy Swiss-Prot
Match: AAKG2_HUMAN (5'-AMP-activated protein kinase subunit gamma-2 OS=Homo sapiens GN=PRKAG2 PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.392e-21
Identity = 76/263 (28.90%), Postives = 125/263 (47.53%), Query Frame = 3
Query:    3 THTAYELLPESGKVVALDIDLPVKQAFHILYEQGISMAPLWDFSKARFVGVLSASDFILILRELGNHGSNLTE-EELETHTISAWKEGKAYLNRQIDSHGKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIPVGTWVPKIGEPNRRPLAMLRPXXXXXXXXXXXXXXXXXSIPIVDDNDSLLDIYCRSDITALAKDKAYAHINLSEMTIHQALQ 788
            +H  Y+++P S K+V  D  L VK+AF  L   G+  APLW+  K  FVG+L+ +DFI IL     + S + +  ELE H I  W+E   YL            +PLV   P+ +L D    ++ N++  +P+I   S +      L+I +   ILK + + F         +K  +  + +GT+           +A + P                 ++P+VD++  ++DIY + D+  LA +K Y   N  ++T+ QALQ
Sbjct:  267 SHKCYDIVPTSSKLVVFDTTLQVKKAFFALVANGVRAAPLWESKKQSFVGMLTITDFINILHRY--YKSPMVQIYELEEHKIETWRE--LYLQETF--------KPLVNISPDASLFDAVYSLIKNKIHRLPVIDPISGNA-----LYILTHKRILKFL-QLFMSDMPKPAFMKQNLDELGIGTY---------HNIAFIHPDTPIIKALNIFVERRISALPVVDESGKVVDIYSKFDVINLAAEKTY---NNLDITVTQALQ 499          
BLAST of CV886975 vs. ExPASy Swiss-Prot
Match: PRKAG_DICDI (5'-AMP-activated protein kinase subunit gamma OS=Dictyostelium discoideum GN=prkag PE=3 SV=3)

HSP 1 Score: 101.293 bits (251), Expect = 7.557e-21
Identity = 80/292 (27.40%), Postives = 134/292 (45.89%), Query Frame = 3
Query:    6 HTAYELLPESGKVVALDIDLPVKQAFHILYEQGISMAPLWDFSKARFVGVLSASDFI-LILRELGNHGSNLTEEELETHTISA-WKEGKAYLNRQIDSHGKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIPVGTWVPKIGEPNRRPLAMLRPXXXXXXXXXXXXXXXXXSIPIVDDNDS-LLDIYCRSDITALAKDKAYAHINLSEMTIHQALQLGQDSYSPYELRSQRCQMCLPSDTLHKV 872
            HT Y+++P SGKVV LD  L VK AF+ L E GI  APLW+  +  F G+++ SDFI ++L       SN   +++  H I   W+E                P  L+   P  NL D A  +L  ++  +P++     +     +LHI + S IL  + + F      L  L +PI ++ +GT+   +      PL  +                   ++PI+D   S ++D+Y +SD+T ++K    +  +L+ + +HQ L     +++    R ++   C   D L  V
Sbjct:  274 HTCYDVIPISGKVVVLDTKLAVKSAFYALEENGIKSAPLWNSEQHDFTGMITVSDFIDILLYYYKKPKSNNIFQDMGIHRIETFWREISV-----------ERPSSLISTEPETNLYDAASLLLCYKIHRLPVVDKKDTN----SILHILTHSRILAFMMKSFPQLPEKL--LSIPIGSLGIGTFATVVTVMTHTPLVEV---------LELLSEKKISAVPIIDSETSKIVDVYSKSDVTLMSKQGILSPSDLN-LPVHQVL----STFTKLWQRPEQIYTCTRFDKLGDV 534          
BLAST of CV886975 vs. ExPASy Swiss-Prot
Match: AAKG3_HUMAN (5'-AMP-activated protein kinase subunit gamma-3 OS=Homo sapiens GN=PRKAG3 PE=2 SV=3)

HSP 1 Score: 97.0561 bits (240), Expect = 1.425e-19
Identity = 74/253 (29.25%), Postives = 120/253 (47.43%), Query Frame = 3
Query:    6 HTAYELLPESGKVVALDIDLPVKQAFHILYEQGISMAPLWDFSKARFVGVLSASDFILILRELGNHGSNLTE-EELETHTISAWKEGKAYLNRQIDSHGKAFPRPLVYAGPNDNLKDVARKILHNEVATVPIIHSSSQDGSFPQLLHIASLSGILKCVCRYFRHCSSSLPILKLPICAIPVGTWVPKIGEPNRRPLAMLRPXXXXXXXXXXXXXXXXXSIPIVDDNDSLLDIYCRSDITALAKDKAYAHINLS 761
            HT Y+ +  S K+V  D  L +K+AF  L   G+  APLWD  K  FVG+L+ +DFIL+L     + S L +  E+E H I  W+E   YL        +   +PLV   PND+L +    ++ N +  +P++   S +     +LHI +   +LK     F H   SL    LP  +    T +  +G    R LA++                   ++P+V++   ++ +Y R D+  LA  + Y H+++S
Sbjct:  191 HTCYDAMATSSKLVIFDTMLEIKKAFFALVANGVRAAPLWDSKKQSFVGMLTITDFILVLHRY--YRSPLVQIYEIEQHKIETWRE--IYL--------QGCFKPLVSISPNDSLFEAVYTLIKNRIHRLPVLDPVSGN-----VLHILTHKRLLK-----FLHIFGSL----LPRPSFLYRT-IQDLGIGTFRDLAVVLETAPILTALDIFVDRRVSALPVVNECGQVVGLYSRFDVIHLAAQQTYNHLDMS 416          
The following BLAST results are available for this feature:
BLAST of CV886975 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
AAKG1_RAT6.835e-2230.715'-AMP-activated protein kinase subunit gamma-1 OS... [more]
AAKG1_PIG6.835e-2230.715'-AMP-activated protein kinase subunit gamma-1 OS... [more]
AAKG1_HUMAN6.835e-2230.715'-AMP-activated protein kinase subunit gamma-1 OS... [more]
AAKG1_BOVIN6.835e-2230.715'-AMP-activated protein kinase subunit gamma-1 OS... [more]
AAKG1_MOUSE8.927e-2229.285'-AMP-activated protein kinase subunit gamma-1 OS... [more]
AAKG2_PONAB2.597e-2128.905'-AMP-activated protein kinase subunit gamma-2 OS... [more]
AAKG2_MOUSE3.392e-2128.905'-AMP-activated protein kinase subunit gamma-2 OS... [more]
AAKG2_HUMAN3.392e-2128.905'-AMP-activated protein kinase subunit gamma-2 OS... [more]
PRKAG_DICDI7.557e-2127.405'-AMP-activated protein kinase subunit gamma OS=D... [more]
AAKG3_HUMAN1.425e-1929.255'-AMP-activated protein kinase subunit gamma-3 OS... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_026D02_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_026_T3_D02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV886975 ID=CV886975; Name=CV886975; organism=Citrus sinensis; type=EST; length=873bp
CTACACACACTGCTTATGAGTTACTTCCCGAGTCAGGCAAGGTTGTAGCA
TTGGACATTGATCTACCTGTAAAACAAGCATTTCATATACTTTATGAGCA
GGGTATCTCCATGGCTCCTCTTTGGGACTTCAGCAAGGCGCGGTTTGTTG
GAGTTCTTAGTGCGTCAGATTTTATATTGATTTTAAGAGAGCTTGGAAAT
CATGGCTCAAATCTCACAGAGGAAGAGCTTGAAACACACACCATATCTGC
CTGGAAAGAGGGGAAAGCGTATTTGAACAGACAAATTGATAGTCATGGGA
AAGCATTTCCAAGACCTCTTGTTTATGCGGGGCCGAATGATAACTTGAAG
GATGTAGCGCGAAAGATTTTGCATAATGAGGTGGCTACAGTTCCCATCAT
CCATTCATCTTCACAGGACGGTTCATTTCCTCAGCTACTACATATTGCAT
CCCTTTCTGGAATTCTAAAATGTGTTTGCAGGTATTTTAGGCATTGTTCT
AGCTCGTTGCCCATTCTAAAGTTACCAATTTGTGCAATTCCTGTGGGTAC
TTGGGTTCCAAAGATTGGAGAGCCTAATCGACGACCATTGGCAATGTTGA
GACCTAGTGCTTCTCTTAGTGCTGCATTAAATTTGTTAGTCCAAGCTCAA
GTAAGTTCGATACCCATAGTTGATGACAACGACTCGTTACTTGATATCTA
CTGTCGGAGTGATATTACGGCTTTGGCAAAGGACAAAGCTTATGCACACA
TTAATCTCAGTGAAATGACCATTCATCAGGCATTGCAATTGGGACAAGAT
TCATATTCTCCTTATGAGTTGAGAAGTCAAAGATGTCAGATGTGTTTGCC
GTCAGATACATTGCATAAAGTGA
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