CV886974
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV886974 vs. ExPASy Swiss-Prot
Match: RL31_NICGU (60S ribosomal protein L31 OS=Nicotiana glutinosa GN=RPL31 PE=2 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 1.199e-47 Identity = 94/115 (81.74%), Postives = 101/115 (87.83%), Query Frame = 2 Query: 20 MVEKTKGRKEEVVTREFTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSRGIRSVPKXXXXXXXXXXNDDEDAKEELYSLVTVAEIPPEGLRGLGTKV 364 M +KTKGRKEEVVTRE+TINLHKRLH CTFKKKAP AIKEIRKFA+KAMGTKDVRVDVKLNKQIWSRGIRSVP+ NDDEDAKEELYSLVTVAEIP +GL+GLGTK+ Sbjct: 1 MSDKTKGRKEEVVTREYTINLHKRLHSCTFKKKAPTAIKEIRKFAQKAMGTKDVRVDVKLNKQIWSRGIRSVPRRVRVRIARKRNDDEDAKEELYSLVTVAEIPAKGLKGLGTKI 115
BLAST of CV886974 vs. ExPASy Swiss-Prot
Match: RL31_PANGI (60S ribosomal protein L31 OS=Panax ginseng GN=RPL31 PE=2 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 1.325e-46 Identity = 93/115 (80.87%), Postives = 100/115 (86.96%), Query Frame = 2 Query: 20 MVEKTKGRKEEVVTREFTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSRGIRSVPKXXXXXXXXXXNDDEDAKEELYSLVTVAEIPPEGLRGLGTKV 364 MVEKTKGRKEEVVTRE+TINLHKRLHGCTFKKKAP AIKEIRKFA+KAMGTKDVRVDVKLNKQIWSRGIRSVP+ NDDEDAKEELYSLVTVA+IP L+GLG ++ Sbjct: 1 MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTKDVRVDVKLNKQIWSRGIRSVPRRVRVRIARKRNDDEDAKEELYSLVTVAKIPAGTLKGLGPQI 115
BLAST of CV886974 vs. ExPASy Swiss-Prot
Match: RL313_ARATH (60S ribosomal protein L31-3 OS=Arabidopsis thaliana GN=RPL31C PE=2 SV=2) HSP 1 Score: 178.333 bits (451), Expect = 3.609e-44 Identity = 88/114 (77.19%), Postives = 96/114 (84.21%), Query Frame = 2 Query: 23 VEKTKGRKEEVVTREFTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSRGIRSVPKXXXXXXXXXXNDDEDAKEELYSLVTVAEIPPEGLRGLGTKV 364 + + KGRKEEV+TRE+TINLH+RLH CTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWS+GIR P+ NDDEDAKEE +SLVTVAEIP EGL GLGTKV Sbjct: 1 MSEKKGRKEEVITREYTINLHRRLHKCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKV 114
BLAST of CV886974 vs. ExPASy Swiss-Prot
Match: RL31_PICMA (60S ribosomal protein L31 OS=Picea mariana GN=RPL31 PE=2 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 4.713e-44 Identity = 84/115 (73.04%), Postives = 97/115 (84.35%), Query Frame = 2 Query: 20 MVEKTKGRKEEVVTREFTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSRGIRSVPKXXXXXXXXXXNDDEDAKEELYSLVTVAEIPPEGLRGLGTKV 364 MVEK K R+ EV TRE+TINLH+RLHGCTFKK APKA+KEIRKFA+KAMGT DVR+DVKLNK +WSRGIRSVP+ ND+EDAK+ELYS+VTVAE+PPEGL GLGTK+ Sbjct: 1 MVEKGKSRRNEVATREYTINLHRRLHGCTFKKMAPKAVKEIRKFAQKAMGTTDVRLDVKLNKAVWSRGIRSVPRRMRVRISRKRNDEEDAKDELYSIVTVAEVPPEGLTGLGTKI 115
BLAST of CV886974 vs. ExPASy Swiss-Prot
Match: RL31_PERFR (60S ribosomal protein L31 OS=Perilla frutescens GN=RPL31 PE=2 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 4.713e-44 Identity = 89/111 (80.18%), Postives = 96/111 (86.49%), Query Frame = 2 Query: 32 TKGRKEEVVTREFTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSRGIRSVPKXXXXXXXXXXNDDEDAKEELYSLVTVAEIPPEGLRGLGTKV 364 +K RKEEVV+RE+TINLHKRLHGCTFKKKAPKAIKEIRKFA+KAMGT DVRVDVKLNK IWSRGIRSVP+ NDDEDAKEELYSLVTVAEIP GL+GLGT+V Sbjct: 6 SKPRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTTDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPEGGLKGLGTQV 116
BLAST of CV886974 vs. ExPASy Swiss-Prot
Match: RL311_ARATH (60S ribosomal protein L31-1 OS=Arabidopsis thaliana GN=RPL31A PE=2 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 6.156e-44 Identity = 89/114 (78.07%), Postives = 95/114 (83.33%), Query Frame = 2 Query: 23 VEKTKGRKEEVVTREFTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSRGIRSVPKXXXXXXXXXXNDDEDAKEELYSLVTVAEIPPEGLRGLGTKV 364 +EK KGRKEEVVTRE+TINLH+RLH CTFKKKAP AIKEIRKFA KAMGTKDVRVDVKLNKQIWS+GIR P+ NDDEDAKEE +SLVTVAEIP EGL GLGTKV Sbjct: 1 MEKGKGRKEEVVTREYTINLHRRLHSCTFKKKAPNAIKEIRKFALKAMGTKDVRVDVKLNKQIWSKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKV 114
BLAST of CV886974 vs. ExPASy Swiss-Prot
Match: RL312_ARATH (60S ribosomal protein L31-2 OS=Arabidopsis thaliana GN=RPL31B PE=2 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 8.040e-44 Identity = 87/114 (76.32%), Postives = 95/114 (83.33%), Query Frame = 2 Query: 23 VEKTKGRKEEVVTREFTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSRGIRSVPKXXXXXXXXXXNDDEDAKEELYSLVTVAEIPPEGLRGLGTKV 364 + + KGRKEEVVTRE+TINLH+RLH CTFKKKAPKAIKEIRKFAEK MGTKDVRVDVKLNKQIWS+GIR P+ NDDEDAKEE +SLVTVAEIP EGL GLGTK+ Sbjct: 1 MSEKKGRKEEVVTREYTINLHRRLHSCTFKKKAPKAIKEIRKFAEKEMGTKDVRVDVKLNKQIWSKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKI 114
BLAST of CV886974 vs. ExPASy Swiss-Prot
Match: RL31_CYAPA (60S ribosomal protein L31 OS=Cyanophora paradoxa GN=RPL31 PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.966e-30 Identity = 66/112 (58.93%), Postives = 81/112 (72.32%), Query Frame = 2 Query: 26 EKTKGRKEEVVTREFTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSRGIRSVPKXXXXXXXXXXNDDEDAKEELYSLVTVAEIPPEGLRGLGTK 361 E K R E+VTRE+TINLHKRLHG FKK+AP+A+KEI+KFA K MGT DVRVD +LNK +W++GIRSVP NDDEDAKE+LY+LVT +P +GL T+ Sbjct: 5 ENKKSRAAEIVTREYTINLHKRLHGVGFKKRAPRAVKEIKKFASKIMGTTDVRVDPRLNKFVWNQGIRSVPYRVRVRLARKRNDDEDAKEKLYTLVTY--VPVTSFKGLQTQ 114
BLAST of CV886974 vs. ExPASy Swiss-Prot
Match: RL31_CHLRE (60S ribosomal protein L31 OS=Chlamydomonas reinhardtii GN=RPL31 PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.966e-30 Identity = 68/112 (60.71%), Postives = 81/112 (72.32%), Query Frame = 2 Query: 29 KTKGRKEEVVTREFTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSRGIRSVPKXXXXXXXXXXNDDEDAKEELYSLVTVAEIPPEGLRGLGTKV 364 K K R +E VTRE+TI+L KRLH +FKK APKA+KEIRKFA K MGT DVR+DVKLNK +WS+GI++VP NDDEDAKEE+YS VTVAE + +G GT V Sbjct: 3 KDKSRSKEQVTREYTIHLSKRLHKTSFKKCAPKAVKEIRKFASKVMGTSDVRLDVKLNKAVWSKGIKNVPTRLRIVISRRRNDDEDAKEEMYSFVTVAE--DQSTKGKGTVV 112
BLAST of CV886974 vs. ExPASy Swiss-Prot
Match: RL31_SPOFR (60S ribosomal protein L31 OS=Spodoptera frugiperda GN=RpL31 PE=2 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.627e-28 Identity = 63/111 (56.76%), Postives = 80/111 (72.07%), Query Frame = 2 Query: 29 KTKGRKEEVVTREFTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSRGIRSVPKXXXXXXXXXXNDDEDAKEELYSLVTVAEIPPEGLRGLGTK 361 K K EVVTRE+T+NLHKRLHG FKK+AP+AIKEIRKFAEK MGT DVRVD +LNK +WS+G+R+VP NDDED+ +L++LVT +P ++GL T+ Sbjct: 9 KGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDVRVDTRLNKFLWSKGVRNVPFRVRVRLSRRRNDDEDSAHKLFTLVTY--VPVASIKGLQTE 117 The following BLAST results are available for this feature:
BLAST of CV886974 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
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Sequences
The
following sequences are available for this feature:
EST sequence >CV886974 ID=CV886974; Name=CV886974; organism=Citrus sinensis; type=EST; length=729bpback to top |