CV886973
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV886973 vs. ExPASy Swiss-Prot
Match: RL31_NICGU (60S ribosomal protein L31 OS=Nicotiana glutinosa GN=RPL31 PE=2 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 1.227e-47 Identity = 95/115 (82.61%), Postives = 102/115 (88.70%), Query Frame = -3 Query: 363 MVEKTKGRKEEVVTREFTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSRGIRSVPKXXXXXXXXXRNDDEDAKEELYSLVTVAEIPPEGLRGLGTKV 707 M +KTKGRKEEVVTRE+TINLHKRLH CTFKKKAP AIKEIRKFA+KAMGTKDVRVDVKLNKQIWSRGIRSVP+ RNDDEDAKEELYSLVTVAEIP +GL+GLGTK+ Sbjct: 1 MSDKTKGRKEEVVTREYTINLHKRLHSCTFKKKAPTAIKEIRKFAQKAMGTKDVRVDVKLNKQIWSRGIRSVPRRVRVRIARKRNDDEDAKEELYSLVTVAEIPAKGLKGLGTKI 115
BLAST of CV886973 vs. ExPASy Swiss-Prot
Match: RL31_PANGI (60S ribosomal protein L31 OS=Panax ginseng GN=RPL31 PE=2 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 1.356e-46 Identity = 94/115 (81.74%), Postives = 101/115 (87.83%), Query Frame = -3 Query: 363 MVEKTKGRKEEVVTREFTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSRGIRSVPKXXXXXXXXXRNDDEDAKEELYSLVTVAEIPPEGLRGLGTKV 707 MVEKTKGRKEEVVTRE+TINLHKRLHGCTFKKKAP AIKEIRKFA+KAMGTKDVRVDVKLNKQIWSRGIRSVP+ RNDDEDAKEELYSLVTVA+IP L+GLG ++ Sbjct: 1 MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTKDVRVDVKLNKQIWSRGIRSVPRRVRVRIARKRNDDEDAKEELYSLVTVAKIPAGTLKGLGPQI 115
BLAST of CV886973 vs. ExPASy Swiss-Prot
Match: RL313_ARATH (60S ribosomal protein L31-3 OS=Arabidopsis thaliana GN=RPL31C PE=2 SV=2) HSP 1 Score: 178.333 bits (451), Expect = 3.693e-44 Identity = 89/114 (78.07%), Postives = 97/114 (85.09%), Query Frame = -3 Query: 363 VEKTKGRKEEVVTREFTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSRGIRSVPKXXXXXXXXXRNDDEDAKEELYSLVTVAEIPPEGLRGLGTKV 704 + + KGRKEEV+TRE+TINLH+RLH CTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWS+GIR P+ RNDDEDAKEE +SLVTVAEIP EGL GLGTKV Sbjct: 1 MSEKKGRKEEVITREYTINLHRRLHKCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKV 114
BLAST of CV886973 vs. ExPASy Swiss-Prot
Match: RL31_PICMA (60S ribosomal protein L31 OS=Picea mariana GN=RPL31 PE=2 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 4.824e-44 Identity = 85/115 (73.91%), Postives = 98/115 (85.22%), Query Frame = -3 Query: 363 MVEKTKGRKEEVVTREFTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSRGIRSVPKXXXXXXXXXRNDDEDAKEELYSLVTVAEIPPEGLRGLGTKV 707 MVEK K R+ EV TRE+TINLH+RLHGCTFKK APKA+KEIRKFA+KAMGT DVR+DVKLNK +WSRGIRSVP+ RND+EDAK+ELYS+VTVAE+PPEGL GLGTK+ Sbjct: 1 MVEKGKSRRNEVATREYTINLHRRLHGCTFKKMAPKAVKEIRKFAQKAMGTTDVRLDVKLNKAVWSRGIRSVPRRMRVRISRKRNDEEDAKDELYSIVTVAEVPPEGLTGLGTKI 115
BLAST of CV886973 vs. ExPASy Swiss-Prot
Match: RL31_PERFR (60S ribosomal protein L31 OS=Perilla frutescens GN=RPL31 PE=2 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 4.824e-44 Identity = 90/111 (81.08%), Postives = 97/111 (87.39%), Query Frame = -3 Query: 363 TKGRKEEVVTREFTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSRGIRSVPKXXXXXXXXXRNDDEDAKEELYSLVTVAEIPPEGLRGLGTKV 695 +K RKEEVV+RE+TINLHKRLHGCTFKKKAPKAIKEIRKFA+KAMGT DVRVDVKLNK IWSRGIRSVP+ RNDDEDAKEELYSLVTVAEIP GL+GLGT+V Sbjct: 6 SKPRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTTDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPEGGLKGLGTQV 116
BLAST of CV886973 vs. ExPASy Swiss-Prot
Match: RL311_ARATH (60S ribosomal protein L31-1 OS=Arabidopsis thaliana GN=RPL31A PE=2 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 6.300e-44 Identity = 90/114 (78.95%), Postives = 96/114 (84.21%), Query Frame = -3 Query: 363 VEKTKGRKEEVVTREFTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSRGIRSVPKXXXXXXXXXRNDDEDAKEELYSLVTVAEIPPEGLRGLGTKV 704 +EK KGRKEEVVTRE+TINLH+RLH CTFKKKAP AIKEIRKFA KAMGTKDVRVDVKLNKQIWS+GIR P+ RNDDEDAKEE +SLVTVAEIP EGL GLGTKV Sbjct: 1 MEKGKGRKEEVVTREYTINLHRRLHSCTFKKKAPNAIKEIRKFALKAMGTKDVRVDVKLNKQIWSKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKV 114
BLAST of CV886973 vs. ExPASy Swiss-Prot
Match: RL312_ARATH (60S ribosomal protein L31-2 OS=Arabidopsis thaliana GN=RPL31B PE=2 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 8.228e-44 Identity = 88/114 (77.19%), Postives = 96/114 (84.21%), Query Frame = -3 Query: 363 VEKTKGRKEEVVTREFTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSRGIRSVPKXXXXXXXXXRNDDEDAKEELYSLVTVAEIPPEGLRGLGTKV 704 + + KGRKEEVVTRE+TINLH+RLH CTFKKKAPKAIKEIRKFAEK MGTKDVRVDVKLNKQIWS+GIR P+ RNDDEDAKEE +SLVTVAEIP EGL GLGTK+ Sbjct: 1 MSEKKGRKEEVVTREYTINLHRRLHSCTFKKKAPKAIKEIRKFAEKEMGTKDVRVDVKLNKQIWSKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKI 114
BLAST of CV886973 vs. ExPASy Swiss-Prot
Match: RL31_CYAPA (60S ribosomal protein L31 OS=Cyanophora paradoxa GN=RPL31 PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 3.035e-30 Identity = 67/112 (59.82%), Postives = 82/112 (73.21%), Query Frame = -3 Query: 366 EKTKGRKEEVVTREFTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSRGIRSVPKXXXXXXXXXRNDDEDAKEELYSLVTVAEIPPEGLRGLGTK 701 E K R E+VTRE+TINLHKRLHG FKK+AP+A+KEI+KFA K MGT DVRVD +LNK +W++GIRSVP RNDDEDAKE+LY+LVT +P +GL T+ Sbjct: 5 ENKKSRAAEIVTREYTINLHKRLHGVGFKKRAPRAVKEIKKFASKIMGTTDVRVDPRLNKFVWNQGIRSVPYRVRVRLARKRNDDEDAKEKLYTLVTY--VPVTSFKGLQTQ 114
BLAST of CV886973 vs. ExPASy Swiss-Prot
Match: RL31_CHLRE (60S ribosomal protein L31 OS=Chlamydomonas reinhardtii GN=RPL31 PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 3.035e-30 Identity = 69/112 (61.61%), Postives = 82/112 (73.21%), Query Frame = -3 Query: 363 KTKGRKEEVVTREFTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSRGIRSVPKXXXXXXXXXRNDDEDAKEELYSLVTVAEIPPEGLRGLGTKV 698 K K R +E VTRE+TI+L KRLH +FKK APKA+KEIRKFA K MGT DVR+DVKLNK +WS+GI++VP RNDDEDAKEE+YS VTVAE + +G GT V Sbjct: 3 KDKSRSKEQVTREYTIHLSKRLHKTSFKKCAPKAVKEIRKFASKVMGTSDVRLDVKLNKAVWSKGIKNVPTRLRIVISRRRNDDEDAKEEMYSFVTVAE--DQSTKGKGTVV 112
BLAST of CV886973 vs. ExPASy Swiss-Prot
Match: RL31_SPOFR (60S ribosomal protein L31 OS=Spodoptera frugiperda GN=RpL31 PE=2 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.275e-28 Identity = 65/117 (55.56%), Postives = 83/117 (70.94%), Query Frame = -3 Query: 366 REKMVEKTKGRKEEVVTREFTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSRGIRSVPKXXXXXXXXXRNDDEDAKEELYSLVTVAEIPPEGLRGLGTK 716 + K K K EVVTRE+T+NLHKRLHG FKK+AP+AIKEIRKFAEK MGT DVRVD +LNK +WS+G+R+VP RNDDED+ +L++LVT +P ++GL T+ Sbjct: 3 KPKGERKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDVRVDTRLNKFLWSKGVRNVPFRVRVRLSRRRNDDEDSAHKLFTLVTY--VPVASIKGLQTE 117 The following BLAST results are available for this feature:
BLAST of CV886973 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
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Sequences
The
following sequences are available for this feature:
EST sequence >CV886973 ID=CV886973; Name=CV886973; organism=Citrus sinensis; type=EST; length=739bpback to top |