CV886950

Overview
NameCV886950
Unique NameCV886950
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length903
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV886950 vs. ExPASy Swiss-Prot
Match: BCP_PEA (Blue copper protein OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 4.389e-35
Identity = 69/97 (71.13%), Postives = 80/97 (82.47%), Query Frame = -1
Query:  616 VYNVGESSGWTMGTDYSTWTSGKTFAVGDSIVFNYGSG-HTVDEVSGSDYNSCTVGNAITSDSSGATTITLKTAGTHYFICGVPGHCGSGMKLAVTV 903
            VY VG++SGW +G DYSTW S KTFAVGDS+VFNYG+G HTVDEV  SDY SCT GN+I++DS+GATTI LK AG HYFICGVPGH   GMKL++ V
Sbjct:   26 VYTVGDTSGWVIGGDYSTWASDKTFAVGDSLVFNYGAGAHTVDEVKESDYKSCTSGNSISTDSTGATTIPLKKAGKHYFICGVPGHSTGGMKLSIKV 122          
BLAST of CV886950 vs. ExPASy Swiss-Prot
Match: BCB2_ARATH (Uclacyanin-2 OS=Arabidopsis thaliana GN=At2g44790 PE=1 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.762e-21
Identity = 48/89 (53.93%), Postives = 56/89 (62.92%), Query Frame = -1
Query:  616 WTMGTDYSTWTSGKTFAVGDSIVFNYGSGHTVDEVSGSDYNSCTVGNAITSDSSGATTITLKTAGTHYFICGVPGHC--GSGMKLAVTV 876
            WT G DYS W +GKTF VGD + F YGS HTVD V  + Y+ C   ++  + S G T I LKT G +YFIC  PGHC    GMKLAV V
Sbjct:   36 WTTGVDYSGWATGKTFRVGDILEFKYGSSHTVDVVDKAGYDGCDASSSTENHSDGDTKIDLKTVGINYFICSTPGHCRTNGGMKLAVNV 124          
BLAST of CV886950 vs. ExPASy Swiss-Prot
Match: MAVI_CUCPE (Mavicyanin OS=Cucurbita pepo PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 6.367e-18
Identity = 44/99 (44.44%), Postives = 61/99 (61.62%), Query Frame = -1
Query:  616 VYNVGESSGWT--MGTDYSTWTSGKTFAVGDSIVFNYGSG-HTVDEVSGSDYNSCTVGNAITSDSSGATTITLKTAGTHYFICGVPGHCGSGMKLAVTV 903
            V+ VG+S+GWT  +  DY+ W S   F VGDS++FNY +  H V +V    + SC   +   S +SGA +I LK  GT YF+CG+PGHC  G K+ + V
Sbjct:    3 VHKVGDSTGWTTLVPYDYAKWASSNKFHVGDSLLFNYNNKFHNVLQVDQEQFKSCNSSSPAASYTSGADSIPLKRPGTFYFLCGIPGHCQLGQKVEIKV 101          
BLAST of CV886950 vs. ExPASy Swiss-Prot
Match: BABL_LILLO (Chemocyanin OS=Lilium longiflorum PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.086e-17
Identity = 48/96 (50.00%), Postives = 55/96 (57.29%), Query Frame = -1
Query:  619 VYNVGESSGWTMGTDYSTWTSGKTFAVGDSIVFNYGSG-HTVDEVSGSDYNSCTVGNAITSDSSGATTITLKTAGTHYFICGVPGHCGSGMKLAVT 903
            VY VG+  GWT GT  S W +GKTF  GD +VF Y    H V  V    Y SCT         SG   ITL + GT+YFIC VPGHC  G+K+AVT
Sbjct:   32 VYTVGDGGGWTFGT--SGWPAGKTFRAGDVLVFKYNPAVHNVVSVPAGGYKSCTASPGSRVFKSGDDRITL-SRGTNYFICSVPGHCQGGLKIAVT 124          
BLAST of CV886950 vs. ExPASy Swiss-Prot
Match: STEL_RHUVE (Stellacyanin OS=Rhus vernicifera PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.493e-16
Identity = 45/102 (44.12%), Postives = 58/102 (56.86%), Query Frame = -1
Query:  616 VYNVGESSGWTM----GTDYS-TWTSGKTFAVGDSIVFNYGSG-HTVDEVSGSDYNSCTVGNAITSDSSGATTITLKTAGTHYFICGVPGHCGSGMKLAVTV 903
            VY VG+S+GW +      DY   W S KTF +GD +VF Y    H VD+V+  +Y SC     I S ++G   I LKT G  Y+ICGVP HC  G K+ + V
Sbjct:    2 VYTVGDSAGWKVPFFGDVDYDWKWASNKTFHIGDVLVFKYDRRFHNVDKVTQKNYQSCNDTTPIASYNTGBBRINLKTVGQKYYICGVPKHCDLGQKVHINV 103          
BLAST of CV886950 vs. ExPASy Swiss-Prot
Match: BCB1_ARATH (Blue copper protein OS=Arabidopsis thaliana GN=BCB PE=1 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 1.623e-13
Identity = 40/99 (40.40%), Postives = 56/99 (56.57%), Query Frame = -1
Query:  616 YNVGESSGWTMGTD---YSTWTSGKTFAVGDSIVFNYGSG-HTVDEVSGSDYNSCTVGNAITSDSSGATTITLKTAGTHYFICGVPGHCGSGMKLAVTV 900
            Y+VG+ + WT   D   Y+TW +GKTF VGD + F++ +G H V  VS + + +C     I+  +     I L T G  YFIC V  HC  G KL++TV
Sbjct:   25 YDVGDDTEWTRPMDPEFYTTWATGKTFRVGDELEFDFAAGRHDVAVVSEAAFENCEKEKPISHMTVPPVKIMLNTTGPQYFICTVGDHCRFGQKLSITV 123          
BLAST of CV886950 vs. ExPASy Swiss-Prot
Match: BABL_CUCSA (Basic blue protein OS=Cucumis sativus PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.374e-12
Identity = 41/95 (43.16%), Postives = 51/95 (53.68%), Query Frame = -1
Query:  622 VYNVGESSGWTMGTDYSTWTSGKTFAVGDSIVFNYGSG-HTVDEVSGSDYNSCTVGNAITSDSSGATTITLKTAGTHYFICGVPGHCGSGMKLAV 903
            VY VG S GWT  T+  +W  GK F  GD ++FNY    H V  V+   +++C         +SG   I L   G  YFIC  PGHC SGMK+AV
Sbjct:    2 VYVVGGSGGWTFNTE--SWPKGKRFRAGDILLFNYNPXMHNVVVVNQGGFSTCNTPAGAKVYTSGRDQIKLPK-GQSYFICNFPGHCQSGMKIAV 93          
BLAST of CV886950 vs. ExPASy Swiss-Prot
Match: BABL_ARATH (Basic blue protein OS=Arabidopsis thaliana GN=At2g02850 PE=1 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 3.997e-12
Identity = 40/95 (42.11%), Postives = 49/95 (51.58%), Query Frame = -1
Query:  619 YNVGESSGWTMGTDYSTWTSGKTFAVGDSIVFNYGSG-HTVDEVSGSDYNSCTVGNAITSDSSGATTITLKTAGTHYFICGVPGHCGSGMKLAVT 900
            Y VG+S  WT       W  GK F  GD +VFNY    H V +V    YN+C         +SG   ITL + G ++FIC  P HC S MK+AVT
Sbjct:   36 YTVGDSGIWTFNA--VGWPKGKHFRAGDVLVFNYNPRMHNVVKVDSGSYNNCKTPTGAKPYTSGKDRITL-SKGQNFFICNFPNHCESDMKIAVT 127          
BLAST of CV886950 vs. ExPASy Swiss-Prot
Match: UMEC_ARMRU (Umecyanin OS=Armoracia rusticana PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 8.904e-12
Identity = 37/99 (37.37%), Postives = 54/99 (54.55%), Query Frame = -1
Query:  616 YNVGESSGWTMGTD---YSTWTSGKTFAVGDSIVFNYGSG-HTVDEVSGSDYNSCTVGNAITSDSSGATTITLKTAGTHYFICGVPGHCGSGMKLAVTV 900
            Y+VG    W   +D   Y TW +GKTF VGD + F++ +G H V  V+   +++C   N I+  ++    I L T G  Y+IC V  HC  G KL++ V
Sbjct:    3 YDVGGDMEWKRPSDPKFYITWATGKTFRVGDELEFDFAAGMHDVAVVTKDAFDNCKKENPISHMTTPPVKIMLNTTGPQYYICTVGDHCRVGQKLSINV 101          
BLAST of CV886950 vs. ExPASy Swiss-Prot
Match: CPC_CUCSA (Cucumber peeling cupredoxin OS=Cucumis sativus PE=1 SV=3)

HSP 1 Score: 70.0922 bits (170), Expect = 1.984e-11
Identity = 39/105 (37.14%), Postives = 61/105 (58.10%), Query Frame = -1
Query:  616 VYNVGESSGWTMGTD---YSTWTSGKTFAVGDSIVFNY-GSGHTVDEV-SGSDYNSCTVGNAITSDSSGATTI----TLKTAGTHYFICGVPGHCGSGMKLAVTV 903
            V+ VG+++GW++ +    YS W +GKTF VGDS+ FN+  + H V E+ +   +++C   N + SD+    T      L   G HYF+C V  HC +G KL++ V
Sbjct:    4 VHIVGDNTGWSVPSSPNFYSQWAAGKTFRVGDSLQFNFPANAHNVHEMETKQSFDAC---NFVNSDNDVERTSPVIERLDELGMHYFVCTVGTHCSNGQKLSINV 105          
The following BLAST results are available for this feature:
BLAST of CV886950 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
BCP_PEA4.389e-3571.13Blue copper protein OS=Pisum sativum PE=2 SV=1[more]
BCB2_ARATH2.762e-2153.93Uclacyanin-2 OS=Arabidopsis thaliana GN=At2g44790 ... [more]
MAVI_CUCPE6.367e-1844.44Mavicyanin OS=Cucurbita pepo PE=1 SV=1[more]
BABL_LILLO1.086e-1750.00Chemocyanin OS=Lilium longiflorum PE=1 SV=1[more]
STEL_RHUVE3.493e-1644.12Stellacyanin OS=Rhus vernicifera PE=1 SV=1[more]
BCB1_ARATH1.623e-1340.40Blue copper protein OS=Arabidopsis thaliana GN=BCB... [more]
BABL_CUCSA1.374e-1243.16Basic blue protein OS=Cucumis sativus PE=1 SV=1[more]
BABL_ARATH3.997e-1242.11Basic blue protein OS=Arabidopsis thaliana GN=At2g... [more]
UMEC_ARMRU8.904e-1237.37Umecyanin OS=Armoracia rusticana PE=1 SV=1[more]
CPC_CUCSA1.984e-1137.14Cucumber peeling cupredoxin OS=Cucumis sativus PE=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_026B08_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_026_T7_B08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV886950 ID=CV886950; Name=CV886950; organism=Citrus sinensis; type=EST; length=903bp
TTTTTTTTTTTTTTTAAAAACAACCGCTTCAAGTTTTAAATTAACAGCAT
CAAACTAACCCAACAAAACTAAAACAAATATTCTCATACTGGGTAATGTT
CCATCAAGTGCAGCAAAGTAAAAAGCATAAAAACAAAAATAAAGGCATTT
AGAAAAGAGATGTTCCCTTTCCCTTCTTGTCTCCACCAATTTCAAAGTGC
TTGCTCATAATATTAAGGATCAAATCCCCTGTGATTGTGAACAGAAAAGC
TATGGCCCTATAATAATAACACACGCATATTTTTTTTTTGTTTTTCAAGG
AAACAACCTACTAATTGATAAAACCAGGCCTCATGAATACAAACTAGAAA
TGCATAACGTAAAGGAGAAAAAGCACTGCCTCTATCCTGGTCATCAGCAA
GGAGAAGCTTATGAGAGAACCAACATGAAGAATGCAACACAAGTAATTCC
TAGAGCAACAAATGGAGAGAAATTAGCCCCCGAAGATAAATCAGGTGTAT
AAGGTGAAGTTTTGGTGGTTGTCGTATTGCGGCCAGAAGGCAGCGAAGAA
CCGCCAGAGCCACCTGTAGATGATGAACCTGAGCCTGATGGAGAAGCGGT
TGGTGACCCTGATCCCACAGTGACGGCAAGCTTCATGCCGCTGCCGCAGT
GACCAGGGACACCACAAATGAAGTAGTGTGTCCCGGCAGTCTTTAGAGTG
ATGGTGGTGGCACCTGAACTGTCTGATGTGATTGCATTTCCCACGGTGCA
TGAGTTGTAGTCACTACCACTCACTTCATCAACAGTGTGCCCACTTCCAT
AGTTGAAAACAATGCTGTCACCAACAGCAAATGTCTTGCCACTGGTCCAA
GTGCTATAGTCAGTACCCATTGTCCAGCCTGAGGACTCTCCTACATTGTA
AAC
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