CV886949

Overview
NameCV886949
Unique NameCV886949
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length838
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV886949 vs. ExPASy Swiss-Prot
Match: BCP_PEA (Blue copper protein OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.874e-37
Identity = 73/102 (71.57%), Postives = 84/102 (82.35%), Query Frame = 1
Query:   52 PSFATVYNVGESSGWTMGTDYSTWTSGKTFAVGDSIVFNYGSG-HTVDEVSGSDYNSCTVGNAITSDSSGATTITLKTAGTHYFICGVPGHCGSGMKLAVTV 354
            PS ATVY VG++SGW +G DYSTW S KTFAVGDS+VFNYG+G HTVDEV  SDY SCT GN+I++DS+GATTI LK AG HYFICGVPGH   GMKL++ V
Sbjct:   21 PSLATVYTVGDTSGWVIGGDYSTWASDKTFAVGDSLVFNYGAGAHTVDEVKESDYKSCTSGNSISTDSTGATTIPLKKAGKHYFICGVPGHSTGGMKLSIKV 122          
BLAST of CV886949 vs. ExPASy Swiss-Prot
Match: BCB2_ARATH (Uclacyanin-2 OS=Arabidopsis thaliana GN=At2g44790 PE=1 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.459e-21
Identity = 48/89 (53.93%), Postives = 56/89 (62.92%), Query Frame = 1
Query:   94 WTMGTDYSTWTSGKTFAVGDSIVFNYGSGHTVDEVSGSDYNSCTVGNAITSDSSGATTITLKTAGTHYFICGVPGHC--GSGMKLAVTV 354
            WT G DYS W +GKTF VGD + F YGS HTVD V  + Y+ C   ++  + S G T I LKT G +YFIC  PGHC    GMKLAV V
Sbjct:   36 WTTGVDYSGWATGKTFRVGDILEFKYGSSHTVDVVDKAGYDGCDASSSTENHSDGDTKIDLKTVGINYFICSTPGHCRTNGGMKLAVNV 124          
BLAST of CV886949 vs. ExPASy Swiss-Prot
Match: MAVI_CUCPE (Mavicyanin OS=Cucurbita pepo PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.126e-19
Identity = 46/101 (45.54%), Postives = 63/101 (62.38%), Query Frame = 1
Query:   61 ATVYNVGESSGWT--MGTDYSTWTSGKTFAVGDSIVFNYGSG-HTVDEVSGSDYNSCTVGNAITSDSSGATTITLKTAGTHYFICGVPGHCGSGMKLAVTV 354
            ATV+ VG+S+GWT  +  DY+ W S   F VGDS++FNY +  H V +V    + SC   +   S +SGA +I LK  GT YF+CG+PGHC  G K+ + V
Sbjct:    1 ATVHKVGDSTGWTTLVPYDYAKWASSNKFHVGDSLLFNYNNKFHNVLQVDQEQFKSCNSSSPAASYTSGADSIPLKRPGTFYFLCGIPGHCQLGQKVEIKV 101          
BLAST of CV886949 vs. ExPASy Swiss-Prot
Match: BABL_LILLO (Chemocyanin OS=Lilium longiflorum PE=1 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 7.402e-18
Identity = 48/98 (48.98%), Postives = 56/98 (57.14%), Query Frame = 1
Query:   61 ATVYNVGESSGWTMGTDYSTWTSGKTFAVGDSIVFNYGSG-HTVDEVSGSDYNSCTVGNAITSDSSGATTITLKTAGTHYFICGVPGHCGSGMKLAVT 351
            + VY VG+  GWT GT  S W +GKTF  GD +VF Y    H V  V    Y SCT         SG   ITL + GT+YFIC VPGHC  G+K+AVT
Sbjct:   30 SVVYTVGDGGGWTFGT--SGWPAGKTFRAGDVLVFKYNPAVHNVVSVPAGGYKSCTASPGSRVFKSGDDRITL-SRGTNYFICSVPGHCQGGLKIAVT 124          
BLAST of CV886949 vs. ExPASy Swiss-Prot
Match: STEL_RHUVE (Stellacyanin OS=Rhus vernicifera PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 8.184e-17
Identity = 46/103 (44.66%), Postives = 59/103 (57.28%), Query Frame = 1
Query:   64 TVYNVGESSGWTM----GTDYS-TWTSGKTFAVGDSIVFNYGSG-HTVDEVSGSDYNSCTVGNAITSDSSGATTITLKTAGTHYFICGVPGHCGSGMKLAVTV 354
            TVY VG+S+GW +      DY   W S KTF +GD +VF Y    H VD+V+  +Y SC     I S ++G   I LKT G  Y+ICGVP HC  G K+ + V
Sbjct:    1 TVYTVGDSAGWKVPFFGDVDYDWKWASNKTFHIGDVLVFKYDRRFHNVDKVTQKNYQSCNDTTPIASYNTGBBRINLKTVGQKYYICGVPKHCDLGQKVHINV 103          
BLAST of CV886949 vs. ExPASy Swiss-Prot
Match: BCB1_ARATH (Blue copper protein OS=Arabidopsis thaliana GN=BCB PE=1 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 2.911e-14
Identity = 42/103 (40.78%), Postives = 58/103 (56.31%), Query Frame = 1
Query:   58 FATVYNVGESSGWTMGTD---YSTWTSGKTFAVGDSIVFNYGSG-HTVDEVSGSDYNSCTVGNAITSDSSGATTITLKTAGTHYFICGVPGHCGSGMKLAVTV 354
            FA  Y+VG+ + WT   D   Y+TW +GKTF VGD + F++ +G H V  VS + + +C     I+  +     I L T G  YFIC V  HC  G KL++TV
Sbjct:   21 FAEDYDVGDDTEWTRPMDPEFYTTWATGKTFRVGDELEFDFAAGRHDVAVVSEAAFENCEKEKPISHMTVPPVKIMLNTTGPQYFICTVGDHCRFGQKLSITV 123          
BLAST of CV886949 vs. ExPASy Swiss-Prot
Match: BABL_CUCSA (Basic blue protein OS=Cucumis sativus PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.223e-12
Identity = 41/95 (43.16%), Postives = 51/95 (53.68%), Query Frame = 1
Query:   67 VYNVGESSGWTMGTDYSTWTSGKTFAVGDSIVFNYGSG-HTVDEVSGSDYNSCTVGNAITSDSSGATTITLKTAGTHYFICGVPGHCGSGMKLAV 348
            VY VG S GWT  T+  +W  GK F  GD ++FNY    H V  V+   +++C         +SG   I L   G  YFIC  PGHC SGMK+AV
Sbjct:    2 VYVVGGSGGWTFNTE--SWPKGKRFRAGDILLFNYNPXMHNVVVVNQGGFSTCNTPAGAKVYTSGRDQIKLPK-GQSYFICNFPGHCQSGMKIAV 93          
BLAST of CV886949 vs. ExPASy Swiss-Prot
Match: BABL_ARATH (Basic blue protein OS=Arabidopsis thaliana GN=At2g02850 PE=1 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 1.223e-12
Identity = 41/98 (41.84%), Postives = 50/98 (51.02%), Query Frame = 1
Query:   61 ATVYNVGESSGWTMGTDYSTWTSGKTFAVGDSIVFNYGSG-HTVDEVSGSDYNSCTVGNAITSDSSGATTITLKTAGTHYFICGVPGHCGSGMKLAVT 351
            A  Y VG+S  WT       W  GK F  GD +VFNY    H V +V    YN+C         +SG   ITL + G ++FIC  P HC S MK+AVT
Sbjct:   33 AATYTVGDSGIWTFNA--VGWPKGKHFRAGDVLVFNYNPRMHNVVKVDSGSYNNCKTPTGAKPYTSGKDRITL-SKGQNFFICNFPNHCESDMKIAVT 127          
BLAST of CV886949 vs. ExPASy Swiss-Prot
Match: CPC_CUCSA (Cucumber peeling cupredoxin OS=Cucumis sativus PE=1 SV=3)

HSP 1 Score: 72.4034 bits (176), Expect = 3.558e-12
Identity = 40/107 (37.38%), Postives = 63/107 (58.88%), Query Frame = 1
Query:   61 ATVYNVGESSGWTMGTD---YSTWTSGKTFAVGDSIVFNY-GSGHTVDEV-SGSDYNSCTVGNAITSDSSGATTI----TLKTAGTHYFICGVPGHCGSGMKLAVTV 354
            +TV+ VG+++GW++ +    YS W +GKTF VGDS+ FN+  + H V E+ +   +++C   N + SD+    T      L   G HYF+C V  HC +G KL++ V
Sbjct:    2 STVHIVGDNTGWSVPSSPNFYSQWAAGKTFRVGDSLQFNFPANAHNVHEMETKQSFDAC---NFVNSDNDVERTSPVIERLDELGMHYFVCTVGTHCSNGQKLSINV 105          
BLAST of CV886949 vs. ExPASy Swiss-Prot
Match: UMEC_ARMRU (Umecyanin OS=Armoracia rusticana PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 7.927e-12
Identity = 37/99 (37.37%), Postives = 54/99 (54.55%), Query Frame = 1
Query:   70 YNVGESSGWTMGTD---YSTWTSGKTFAVGDSIVFNYGSG-HTVDEVSGSDYNSCTVGNAITSDSSGATTITLKTAGTHYFICGVPGHCGSGMKLAVTV 354
            Y+VG    W   +D   Y TW +GKTF VGD + F++ +G H V  V+   +++C   N I+  ++    I L T G  Y+IC V  HC  G KL++ V
Sbjct:    3 YDVGGDMEWKRPSDPKFYITWATGKTFRVGDELEFDFAAGMHDVAVVTKDAFDNCKKENPISHMTTPPVKIMLNTTGPQYYICTVGDHCRVGQKLSINV 101          
The following BLAST results are available for this feature:
BLAST of CV886949 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
BCP_PEA1.874e-3771.57Blue copper protein OS=Pisum sativum PE=2 SV=1[more]
BCB2_ARATH2.459e-2153.93Uclacyanin-2 OS=Arabidopsis thaliana GN=At2g44790 ... [more]
MAVI_CUCPE5.126e-1945.54Mavicyanin OS=Cucurbita pepo PE=1 SV=1[more]
BABL_LILLO7.402e-1848.98Chemocyanin OS=Lilium longiflorum PE=1 SV=1[more]
STEL_RHUVE8.184e-1744.66Stellacyanin OS=Rhus vernicifera PE=1 SV=1[more]
BCB1_ARATH2.911e-1440.78Blue copper protein OS=Arabidopsis thaliana GN=BCB... [more]
BABL_CUCSA1.223e-1243.16Basic blue protein OS=Cucumis sativus PE=1 SV=1[more]
BABL_ARATH1.223e-1241.84Basic blue protein OS=Arabidopsis thaliana GN=At2g... [more]
CPC_CUCSA3.558e-1237.38Cucumber peeling cupredoxin OS=Cucumis sativus PE=... [more]
UMEC_ARMRU7.927e-1237.37Umecyanin OS=Armoracia rusticana PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_026B08_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_026_T3_B08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV886949 ID=CV886949; Name=CV886949; organism=Citrus sinensis; type=EST; length=838bp
GTTTTCTCTGGGTTGGTTGTTTGTGCAGTTTTAGTCTTTTGTGTGGTGGT
TCCAAGCTTTGCTACAGTTTACAATGTAGGAGAGTCCTCAGGCTGGACAA
TGGGTACTGACTATAGCACTTGGACCAGTGGCAAGACATTTGCTGTTGGT
GACAGCATTGTTTTCAACTATGGAAGTGGGCACACTGTTGATGAAGTGAG
TGGTAGTGACTACAACTCATGCACCGTGGGAAATGCAATCACATCAGACA
GTTCAGGTGCCACCACCATCACTCTAAAGACTGCCGGGACACACTACTTC
ATTTGTGGTGTCCCTGGTCACTGCGGCAGCGGCATGAAGCTTGCCGTCAC
TGTGGGATCAGGGTCACCAACCGCTTCTCCATCAGGCTCAGGTTCATCAT
CTACAGGTGGCTCTGGCGGTTCTTCGCTGCCTTCTGGCCGCAATACGACA
ACCACCAAAACTTCACCTTATACACCTGATTTATCTTCGGGGGCTAATTT
CTCTCCATTTGTTGCTCTAGGAATTACTTGTGTTGCATTCTTCATGTTGG
TTCTCTCATAAGCTTCTCCTTGCTGATGACCAGGATAGAGGCAGTGCTTT
TTCTCCTTTACGTTATGCATTTCTAGTTTGTATTCATGAGGCCTGGTTTT
ATCAATTAGTAGGTTGTTTCCTTGAAAAACAAAAAAAAAATATGCGTGTG
TTATTATTATAGGGCCATAGCTTTTCTGTTCACAATCACAGGGGATTTGA
TCCTTAATATTATGAGCAAGCACTTTGAAATTGGTGGAGACAAGAAGGGA
AAGGGAACATCTCTTTTCTAAATGCCTTTATTTTTGTT
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