CV886948
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV886948 vs. ExPASy Swiss-Prot
Match: BH048_ARATH (Transcription factor bHLH48 OS=Arabidopsis thaliana GN=BHLH48 PE=2 SV=1) HSP 1 Score: 210.69 bits (535), Expect = 1.073e-53 Identity = 118/184 (64.13%), Postives = 133/184 (72.28%), Query Frame = -1 Query: 436 NDSSEDAEKLPYVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDEIINHVQSLQRQVEFLSMRLAAVNPRIDFNLDSLFVAESGSLIDSSFPGVVMPVMWPELQAHGNRQQYQ--QQWHHFDGHHQPLLGGAEESHNFVTPENSLLSYDSSANSATLHTNQLKMEL 981 N SS +++KLPYVHVRARRGQATD+HSLAERARREKINARMKLLQELVPGC+KI GTALVLDEIINHVQ+LQRQVE LSMRLAAVNPRIDFNLDS+ +E+GSL+D SF N + Y QQW FDG+HQP G E+ H + S SATLH NQ+KMEL Sbjct: 171 NKSSVESDKLPYVHVRARRGQATDNHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQTLQRQVEMLSMRLAAVNPRIDFNLDSILASENGSLMDGSF----------------NAESYHQLQQW-PFDGYHQPEWGREEDHH----------QANFSMGSATLHPNQVKMEL 327
BLAST of CV886948 vs. ExPASy Swiss-Prot
Match: BH060_ARATH (Transcription factor bHLH60 OS=Arabidopsis thaliana GN=BHLH60 PE=2 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 7.198e-50 Identity = 124/238 (52.10%), Postives = 142/238 (59.66%), Query Frame = -1 Query: 436 NDSSEDAEKLPYVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCNK-----------------------------------------------ISGTALVLDEIINHVQSLQRQVEFLSMRLAAVNPRIDFNLDSLFVAESGSLIDSSFPGVVMPVMWPEL-----QAHGNRQQYQ---QQWHHFDGHHQPLLGGAE-ESHNFVTPENSLLSYDSSANSATLHTNQLKMEL 981 N SSE+ EKLPYVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGC+K I GTALVLDEIINHVQSLQRQVE LSMRLAAVNPRIDFNLD++ +E+GSL+D SF M + WP+ Q+ +RQ Q QQW FDG +QP+ G E ++H +S + SA LH NQ+KMEL Sbjct: 190 NKSSEENEKLPYVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCDKGTDFGGKIKIKVCFGVHLLMISGKKVAIFLWKVSCEDLIDCSFSPPRIQGTALVLDEIINHVQSLQRQVEMLSMRLAAVNPRIDFNLDTILASENGSLMDGSFNAAPMQLAWPQQAIETEQSFHHRQLQQPPTQQW-PFDGLNQPVWGREEDQAHGNDNSNLMAVSENVMVASANLHPNQVKMEL 426
BLAST of CV886948 vs. ExPASy Swiss-Prot
Match: BH049_ARATH (Transcription factor bHLH49 OS=Arabidopsis thaliana GN=BHLH49 PE=2 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 3.246e-34 Identity = 80/131 (61.07%), Postives = 98/131 (74.81%), Query Frame = -1 Query: 595 SEDAEKLPYVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDEIINHVQSLQRQVEFLSMRLAAVNPRIDFNLDSLFVAE-----SGSLIDSSFPGVVMPVMWPELQAHGNRQQ 972 S D K Y+HVRARRGQAT+SHSLAER RREKI+ RMK LQ+LVPGCNK++G A++LDEIIN+VQSLQRQVEFLSM+LA VNP++DFNL+ L + +GS + FP M + +P L HG QQ Sbjct: 292 SSDPPKDGYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPQMDFNLEGLLAKDALQLRAGSSSTTPFP-PNMSMAYPPL-PHGFMQQ 420
BLAST of CV886948 vs. ExPASy Swiss-Prot
Match: BH063_ARATH (Transcription factor bHLH63 OS=Arabidopsis thaliana GN=BHLH63 PE=2 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 4.239e-34 Identity = 73/107 (68.22%), Postives = 89/107 (83.18%), Query Frame = -1 Query: 673 ANDSSE---DAEKLPYVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDEIINHVQSLQRQVEFLSMRLAAVNPRIDFNLDSLFVAESGS 984 +NDSS+ + EK Y+HVRARRGQATDSHS+AER RREKI+ RMK LQ+LVPGC+KI+G A +LDEIIN+VQSLQRQ+EFLSM+LA VNPR DF++D +F E S Sbjct: 154 SNDSSKVTKELEKTDYIHVRARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQSLQRQIEFLSMKLAIVNPRPDFDMDDIFAKEVAS 260
BLAST of CV886948 vs. ExPASy Swiss-Prot
Match: BH062_ARATH (Transcription factor bHLH62 OS=Arabidopsis thaliana GN=BHLH62 PE=2 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 5.537e-34 Identity = 85/159 (53.46%), Postives = 105/159 (66.04%), Query Frame = -1 Query: 472 YVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDEIINHVQSLQRQVEFLSMRLAAVNPRIDFNLDSLFVAESGSLIDSSFPGVVMPVMWPELQAHGNRQQYQQQWHHFDGHHQPLLGGAEESHNFVTPENSLLSYDSSANS 948 Y+HVRARRGQATDSHSLAER RREKI+ RMKLLQ+LVPGCNK++G AL+LDEIIN+VQSLQRQVEFLSM+L++VN R+DFN+D+L L FP N + QQ D + LLG + HN +N L+ D S+N+ Sbjct: 255 YIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLSSVNTRLDFNMDAL-------LSKDIFPS-------------SNNLMHHQQVLQLDSSAETLLG---DHHN----KNLQLNPDISSNN 386
BLAST of CV886948 vs. ExPASy Swiss-Prot
Match: BH078_ARATH (Transcription factor bHLH78 OS=Arabidopsis thaliana GN=BHLH78 PE=2 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 1.611e-33 Identity = 82/163 (50.31%), Postives = 108/163 (66.26%), Query Frame = -1 Query: 499 ANDSSEDAEKLPYVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDEIINHVQSLQRQVEFLSMRLAAVN-PRIDFNLDSLFVAESGSLIDSSFPGVVMPVMWPELQAHGNRQQYQQQWHHFDGHHQPLLGGAEESHNFVTPENSL 984 +N++ Y+HVRARRGQATDSHSLAER RREKI RMKLLQ+LVPGCNK++G AL+LDEIIN+VQSLQRQVEFLSM+L++VN R+DFN+D+L D P + LQ+ + +QQQ + ++ + Q L + + +P NSL Sbjct: 286 SNNTKPPEPPKDYIHVRARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLSSVNDTRLDFNVDALVSK------DVMIPSSNNRLHEEGLQSKSSSHHHQQQLNIYNNNSQLLPNISSNNMMLQSPMNSL 442
BLAST of CV886948 vs. ExPASy Swiss-Prot
Match: BH076_ARATH (Transcription factor bHLH76 OS=Arabidopsis thaliana GN=BHLH76 PE=2 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 3.968e-32 Identity = 87/201 (43.28%), Postives = 125/201 (62.19%), Query Frame = -1 Query: 439 ANDSSEDAEKLP-------YVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDEIINHVQSLQRQVEFLSMRLAAVNPRIDFNLDSLFVAESGSLIDSSFPGVVMPVMWPELQAHGNRQQYQQQWHHFDGHHQP------LLGGA---EESHNFVTPENSLLSYDSSANSATLH---TNQLKME 984 +N + ++EK P Y+H+RARRGQAT+SHSLAER RREKI+ RMK LQ+LVPGC+K++G A++LDEIIN+VQSLQ Q+EFLSM+L+AVNP +DFNL+SL ++ +FP M +++P + Y Q G QP LL G +E+H + + ++L+ + +A H T +K+E Sbjct: 201 SNANKTNSEKQPSDSLKDGYIHMRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCDKVTGKAVMLDEIINYVQSLQCQIEFLSMKLSAVNPVLDFNLESLLAKDALQSSAPTFPH-NMSMLYPPV-------SYLSQ----TGFMQPNISSMSLLSGGLKRQETHGYESDHHNLVHMNHETGTAPDHEDTTADMKVE 389
BLAST of CV886948 vs. ExPASy Swiss-Prot
Match: BH074_ARATH (Transcription factor bHLH74 OS=Arabidopsis thaliana GN=BHLH74 PE=2 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 3.968e-32 Identity = 67/100 (67.00%), Postives = 85/100 (85.00%), Query Frame = -1 Query: 682 NDSSEDAEKLPYVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDEIINHVQSLQRQVEFLSMRLAAVNPRIDFNLDSLFVAE 981 + SE+A K Y+H+RARRGQAT+SHSLAER RREKI+ RM+LLQELVPGCNKI+G A++LDEIIN+VQSLQ+QVEFLSM+LA VNP I+ ++D + + Sbjct: 192 SSQSEEAPKENYIHMRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPEINIDIDRILAKD 291
BLAST of CV886948 vs. ExPASy Swiss-Prot
Match: BH077_ARATH (Transcription factor bHLH77 OS=Arabidopsis thaliana GN=BHLH77 PE=2 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 5.182e-32 Identity = 70/103 (67.96%), Postives = 86/103 (83.50%), Query Frame = -1 Query: 682 DSSEDAEK----LPYVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDEIINHVQSLQRQVEFLSMRLAAVNPRIDFNLDSLFVAE 978 D+ +DA+ Y+HVRARRGQATDSHSLAERARREKI+ RM LLQ+LVPGCN+I+G A++LDEIIN+VQSLQRQVEFLSM+LA VNPR++FN ++ E Sbjct: 174 DNKDDAKPPEAPKDYIHVRARRGQATDSHSLAERARREKISERMTLLQDLVPGCNRITGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMEFNANASLSTE 276
BLAST of CV886948 vs. ExPASy Swiss-Prot
Match: BPE_ARATH (Transcription factor BPE OS=Arabidopsis thaliana GN=BPE PE=2 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 4.850e-30 Identity = 64/79 (81.01%), Postives = 74/79 (93.67%), Query Frame = -1 Query: 712 YVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDEIINHVQSLQRQVEFLSMRLAAVNPRID 948 Y+HVRARRGQATDSHSLAERARREKI+ RMK+LQ+LVPGCNK+ G ALVLDEIIN++QSLQRQVEFLSM+L AVN R++ Sbjct: 133 YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMN 211 The following BLAST results are available for this feature:
BLAST of CV886948 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CV886948 ID=CV886948; Name=CV886948; organism=Citrus sinensis; type=EST; length=987bpback to top |