CX043515

Overview
NameCX043515
Unique NameCX043515
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length711
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043515 vs. ExPASy Swiss-Prot
Match: Y2579_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase At2g25790 OS=Arabidopsis thaliana GN=At2g25790 PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.291e-14
Identity = 73/211 (34.60%), Postives = 98/211 (46.45%), Query Frame = 2
Query:   23 LQHLTYLDLSDNDFSGIPIADFIGSLSSKLRHLDLGWAGFAGSVPPQLGNLSNLQYLNLGYNDLLSVGNXXXXXXXXXXXXXXXXXXXXXXXXXDWPLVVYKLSSLTTLILEGCDLPPFFPSADDPLHLNSSKSLEFLDLSENNLTSSVYPWLFNVSSNLVELGLSSNLLQGSIPDAFEHMVSLQTLFLYSNELEG----GISKILRKHVL 643
            L +L  LDLS+N F+G  I + IG  S+ LR LDLG     G VP  LGNLS L++L L  N L                              + P  +  LSSL  L L   +L     S   P  L   K LE++ L +N L+  + P +F++  NL+ L  S N L G IP+    M SL+ L L+SN L G    G++ + R  VL
Sbjct:  144 LPNLYTLDLSNNMFTG-EIYNDIGVFSN-LRVLDLGGNVLTGHVPGYLGNLSRLEFLTLASNQLTG----GVPVELGKMKNLKWIYLGYNNLSGEIPYQIGGLSSLNHLDLVYNNL-----SGPIPPSLGDLKKLEYMFLYQNKLSGQIPPSIFSLQ-NLISLDFSDNSLSGEIPELVAQMQSLEILHLFSNNLTGKIPEGVTSLPRLKVL 342          
BLAST of CX043515 vs. ExPASy Swiss-Prot
Match: Y1571_ARATH (Probable leucine-rich repeat receptor-like protein kinase At1g35710 OS=Arabidopsis thaliana GN=At1g35710 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 4.302e-14
Identity = 69/198 (34.85%), Postives = 88/198 (44.44%), Query Frame = 2
Query:   23 LQHLTYLDLSDNDFSGIPIADFIGSLSSKLRHLDLGWAGFAGSVPPQLGNLSNLQYLNLGYNDLLSVGNXXXXXXXXXXXXXXXXXXXXXXXXXDWPLVVYKLSSLTTLILEGCDLPPFFPSADDPLHLNSSKSLEFLDLSENNLTSSVYPWLFNVSSNLVELGLSSNLLQGSIPDAFEHMVSLQTLFLYSNELEGGI 616
            L +L Y+DLS N  SG     F G+LS KL + DL      G + P LGNL NL  L L  N L SV                             P  +  + S+T L L    L    PS+     L + K+L  L L EN LT  + P L N+ S + +L LS N L GSIP    ++ +L  L+LY N L G I
Sbjct:  101 LSNLAYVDLSMNLLSGTIPPQF-GNLS-KLIYFDLSTNHLTGEISPSLGNLKNLTVLYLHQNYLTSV----------------------------IPSELGNMESMTDLALSQNKLTGSIPSS-----LGNLKNLMVLYLYENYLTGVIPPELGNMES-MTDLALSQNKLTGSIPSTLGNLKNLMVLYLYENYLTGVI 262          

HSP 2 Score: 24.6386 bits (52), Expect = 4.302e-14
Identity = 12/31 (38.71%), Postives = 16/31 (51.61%), Query Frame = 3
Query:  618 PKFFGNMCCLNELVLCSNQLTGQLFEFIQNL 710
            P   GNM  +  L L  N+LTG +   + NL
Sbjct:  263 PPEIGNMESMTNLALSQNKLTGSIPSSLGNL 293          
BLAST of CX043515 vs. ExPASy Swiss-Prot
Match: Y1341_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g34110 OS=Arabidopsis thaliana GN=At1g34110 PE=2 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 5.996e-12
Identity = 64/203 (31.53%), Postives = 84/203 (41.38%), Query Frame = 2
Query:    8 PSLRKLQHLTYLDLSDNDFSGIPIADFIGSLSSKLRHLDLGWAGFAGSVPPQLGNLSNLQYLNLGYNDLLSVGNXXXXXXXXXXXXXXXXXXXXXXXXXDWPLVVYKLSSLTTLILEGCDLPPFFPSADDPLHLNSSKSLEFLDLSENNLTSSVYPWLFNVSSNLVELGLSSNLLQGSIPDAFEHMVSLQTLFLYSNELEGGI 616
            P L  L  L +L+LS  + SG PI    G L+  LR LDL     +G +P +LG LS LQ+L L  N L                                P  +  L +L  L L+   L    PS+       S  SL+   L  N       P       NL  LG +++ L GSIP  F ++V+LQTL LY  E+ G I
Sbjct:   85 PDLSSLSSLQFLNLSSTNLSG-PIPPSFGKLTH-LRLLDLSSNSLSGPIPSELGRLSTLQFLILNANKL----------------------------SGSIPSQISNLFALQVLCLQDNLLNGSIPSS-----FGSLVSLQQFRLGGNTNLGGPIPAQLGFLKNLTTLGFAASGLSGSIPSTFGNLVNLQTLALYDTEISGTI 252          
BLAST of CX043515 vs. ExPASy Swiss-Prot
Match: ERL2_ARATH (LRR receptor-like serine/threonine-protein kinase ERL2 OS=Arabidopsis thaliana GN=ERL2 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.023e-11
Identity = 67/210 (31.90%), Postives = 95/210 (45.24%), Query Frame = 2
Query:   23 LQHLTYLDLSDNDFSGIPIADFIGSLSSKLRHLDLGWAGFAGSVPPQLGNLSNLQYLNLGYNDLLSVGNXXXXXXXXXXXXXXXXXXXXXXXXXDWPLVVYKLSSLTTLILEGCDLPPFFPSADDPLHLNSSKSLEFLDLSENNLTSSVYPWLFNVSSNLVELGLSSNLLQGSIPDAFEHMVSLQTLFLYSNELEGGISKIL--RKHVLL 646
            +Q L  LDLSDN+ +G PI   +G+LS   + L L      G +PP+LGN+S L YL L  N+L  VG                            P  + KL  L  L L   +L    PS     +++S  +L   ++  N L+ +V P  F    +L  L LSSN  +G IP    H+++L TL L  N   G I   L   +H+L+
Sbjct:  287 MQALAVLDLSDNELTG-PIPPILGNLSFTGK-LYLHGNKLTGQIPPELGNMSRLSYLQLNDNEL--VGKI--------------------------PPELGKLEQLFELNLANNNLVGLIPS-----NISSCAALNQFNVHGNFLSGAV-PLEFRNLGSLTYLNLSSNSFKGKIPAELGHIINLDTLDLSGNNFSGSIPLTLGDLEHLLI 460          
BLAST of CX043515 vs. ExPASy Swiss-Prot
Match: RPK1_IPONI (Receptor-like protein kinase OS=Ipomoea nil GN=INRPK1 PE=2 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 2.278e-11
Identity = 61/203 (30.05%), Postives = 91/203 (44.83%), Query Frame = 2
Query:    8 PSLRKLQHLTYLDLSDNDFSGIPIADFIGSLSSKLRHLDLGWAGFAGSVPPQLGNLSNLQYLNLGYNDLLSVGNXXXXXXXXXXXXXXXXXXXXXXXXXDWPLVVYKLSSLTTLILEGCDLPPFFPSADDPLHLNSSKSLEFLDLSENNLTSSVYPWLFNVSSNLVELGLSSNLLQGSIPDAFEHMVSLQTLFLYSNELEGGI 616
            P +  L+HL  + LS N F G  I   +G+ S  L H+DL    F G++P  LG L NL+ L+L +N L+                               P  +  +S LTTL L+         S   P  L +  +L+ L L++NNL  ++ P   N   NLV L + +N L G+IP  F     + T+ L +N+  GG+
Sbjct:   86 PEISHLKHLKKVVLSGNGFFG-SIPSQLGNCSL-LEHIDLSSNSFTGNIPDTLGALQNLRNLSLFFNSLIG----PFPESLLSIPHLETVYFTGNGLNGSIPSNIGNMSELTTLWLDDNQF-----SGPVPSSLGNITTLQELYLNDNNLVGTL-PVTLNNLENLVYLDVRNNSLVGAIPLDFVSCKQIDTISLSNNQFTGGL 276          
BLAST of CX043515 vs. ExPASy Swiss-Prot
Match: Y4361_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g36180 OS=Arabidopsis thaliana GN=At4g36180 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.076e-11
Identity = 64/218 (29.36%), Postives = 95/218 (43.58%), Query Frame = 2
Query:   11 SLRKLQHLTYLDLSDNDFSGIPIADFIGSLSSKLRHLDLGWAGFAGSVPPQLGNLSNLQYLNLGYNDL-----LSVGNXXXXXXXXXXXXXXXXXXXXXXXXXDWPLVVYKLSSLTTLILEGCDLPPFFPSADDPLHLNSSKSLEFLDLSENNLTSSVYPWLFNVSSNLVELGLSSNLLQGSIPDAFEHMVSLQTLFLYSNELEGGISKILRKHVLLK 649
            S+  LQ L  L+L +N+ +G    + +   S  L  LDL    F+G+VP  + NLSNL +LNL  N        SVGN                         + P+ +  L ++  + L+G +     P        +S  SL +++LS N+ +  + P  F     LV L LS N + GSIP    +  +L+ L L SN L G I   L +   LK
Sbjct:  423 SMVNLQQLERLNLGENNLNGSFPVELMALTS--LSELDLSGNRFSGAVPVSISNLSNLSFLNLSGNGFSGEIPASVGN---------LFKLTALDLSKQNMSGEVPVELSGLPNVQVIALQGNNFSGVVPEG-----FSSLVSLRYVNLSSNSFSGEI-PQTFGFLRLLVSLSLSDNHISGSIPPEIGNCSALEVLELRSNRLMGHIPADLSRLPRLK 623          
BLAST of CX043515 vs. ExPASy Swiss-Prot
Match: Y5148_ARATH (Probable leucine-rich repeat receptor-like protein kinase At5g61480 OS=Arabidopsis thaliana GN=At5g61480 PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.658e-11
Identity = 60/204 (29.41%), Postives = 89/204 (43.63%), Query Frame = 2
Query:    2 LSPSLRKLQHLTYLDLSDNDFSG-IPIADFIGSLSSKLRHLDLGWAGFAGSVPPQLGNLSNLQYLNLGYNDLLSVGNXXXXXXXXXXXXXXXXXXXXXXXXXDWPLVVYKLSSLTTLILEGCDLPPFFPSADDPLHLNSSKSLEFLDLSENNLTSSVYPWLFNVSSNLVELGLSSNLLQGSIPDAFEHMVSLQTLFLYSNELEG 610
            L   + +L+ L  L+   + F G IP A   G L  +L+ + L      G +PP+LG L+ LQ++ +GYN      N                           P  +  LS+L TL L          + + P   ++ KSL+ LD S N L+ S+ P  F+   NL  L L SN L G +P+    +  L TLFL++N   G
Sbjct:  169 LPSDVSRLRFLEELNFGGSYFEGEIPAA--YGGLQ-RLKFIHLAGNVLGGKLPPRLGLLTELQHMEIGYNHF----NGNIPSEFALLSNLKYFDVSNCSLSGSLPQELGNLSNLETLFLFQNGF-----TGEIPESYSNLKSLKLLDFSSNQLSGSI-PSGFSTLKNLTWLSLISNNLSGEVPEGIGELPELTTLFLWNNNFTG 359          
The following BLAST results are available for this feature:
BLAST of CX043515 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
Y2579_ARATH1.291e-1434.60Probably inactive leucine-rich repeat receptor-lik... [more]
Y1571_ARATH4.302e-1434.85Probable leucine-rich repeat receptor-like protein... [more]
Y1341_ARATH5.996e-1231.53Probable LRR receptor-like serine/threonine-protei... [more]
ERL2_ARATH1.023e-1131.90LRR receptor-like serine/threonine-protein kinase ... [more]
RPK1_IPONI2.278e-1130.05Receptor-like protein kinase OS=Ipomoea nil GN=INR... [more]
Y4361_ARATH5.076e-1129.36Probable LRR receptor-like serine/threonine-protei... [more]
Y5148_ARATH8.658e-1129.41Probable leucine-rich repeat receptor-like protein... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS07_11F01_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-11F01-K1-1-7.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043515 ID=CX043515; Name=CX043515; organism=Citrus sinensis; type=EST; length=711bp
ATTAAGCCCTTCTTTGCGTAAATTGCAACATTTAACTTATTTGGACCTCA
GTGACAATGATTTCAGTGGAATTCCGATTGCTGACTTCATTGGTTCCCTC
AGTAGCAAATTGAGGCACCTCGATCTTGGTTGGGCTGGGTTTGCTGGGTC
AGTTCCTCCTCAGCTAGGAAACCTTTCAAACTTGCAATATCTTAACCTTG
GGTACAATGATTTATTAAGTGTCGGAAACCTGCTCCATTGGCTTTATCAT
CTTTCATCTTTAAGGTATCTTCACCTGGGTCATAATAACCTCAGTAATTC
CAACGACTGGCCTCTTGTAGTTTACAAGCTCTCGTCCCTAACAACCTTGA
TCCTTGAAGGGTGTGACCTTCCACCTTTCTTTCCATCGGCTGATGATCCA
TTGCACCTTAATTCCAGTAAATCTCTTGAGTTCCTTGATCTCTCTGAAAA
CAATCTCACTTCTTCAGTATACCCTTGGTTGTTCAATGTTAGTAGCAATC
TTGTTGAGCTTGGGCTTAGTTCTAACCTTTTACAAGGTTCGATTCCTGAT
GCTTTTGAACACATGGTCTCTCTTCAAACCCTTTTTCTCTATTCTAATGA
ACTTGAAGGTGGGATTTCCAAAATTCTTCGGAAACATGTGTTGCTTAAAT
GAATTAGTTTTGTGTTCCAATCAACTCACTGGACAGCTCTTTGAGTTCAT
TCAAAATCTGT
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