CV886928

Overview
NameCV886928
Unique NameCV886928
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length940
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV886928 vs. ExPASy Swiss-Prot
Match: 5NT3_MOUSE (Cytosolic 5'-nucleotidase 3 OS=Mus musculus GN=Nt5c3 PE=1 SV=4)

HSP 1 Score: 127.102 bits (318), Expect = 1.443e-28
Identity = 76/196 (38.78%), Postives = 122/196 (62.24%), Query Frame = -1
Query:  326 KTHGLLIEGGLTYDTIKKSVSNALIAFRDGVVKLFEFLEERDIPVLIFSAGLADIIEEVLRQK-VHKSFKNVKIVSNRMVFDKDGHLVSFKGKTIHSLNKNEHALDMAAPLHEHFGDTDGPNYDNASVKNRTNVLLLGDHIGDLGMSDGL-KYETRISVGFLNDNIENNLDNYRNAFDIVYLNDAPMWEVVELVSQ 907
            K+HGLLIE G+    +K+ V+++ +  ++G    F  L++  IPV IFSAG+ D++EEV+RQ  V+ S  NVK+VSN M FD++G L  FKG+ IH  NK++ AL       ++F          + +K+ +N++LLGD  GDL M+DG+   E  + +G+LND ++  L+ Y +++DIV + +  + EVV  + Q
Sbjct:  150 KSHGLLIEQGIPKAKLKEIVADSDVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHS--NVKVVSNFMDFDENGVLKGFKGELIHVFNKHDGALKNT----DYF----------SQLKDNSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVKEESL-EVVNSILQ 328          
BLAST of CV886928 vs. ExPASy Swiss-Prot
Match: 5NT3_CHICK (Cytosolic 5'-nucleotidase III OS=Gallus gallus GN=NT5C3 PE=1 SV=3)

HSP 1 Score: 127.102 bits (318), Expect = 1.443e-28
Identity = 78/196 (39.80%), Postives = 117/196 (59.69%), Query Frame = -1
Query:  326 KTHGLLIEGGLTYDTIKKSVSNALIAFRDGVVKLFEFLEERDIPVLIFSAGLADIIEEVLRQK-VHKSFKNVKIVSNRMVFDKDGHLVSFKGKTIHSLNKNEHALDMAAPLHEHFGDTDGPNYDNASVKNRTNVLLLGDHIGDLGMSDGL-KYETRISVGFLNDNIENNLDNYRNAFDIVYLNDAPMWEVVELVSQ 907
            K+H LLIE GL  D + + V  + +  ++G    F+ L E +IPV IFSAG+ DI+EEV+ Q  V+ S  NVK+VSN M FD++G L  FKG+ IH  NK++ AL       E+F            +K+ +N++LLGD  GDL M+DG+   E  + +G+LND ++  L+ Y +++DIV + D  + EV   + Q
Sbjct:  150 KSHALLIEQGLQKDKLAEVVRESDVMLKEGYENFFDKLSEHNIPVFIFSAGIGDILEEVIHQAGVYHS--NVKVVSNFMDFDENGILKGFKGELIHVYNKHDGALKNT----EYF----------KQLKDNSNIILLGDSQGDLSMADGVANVEHILKIGYLNDKVDELLEKYMDSYDIVLVKDESL-EVANSILQ 328          
BLAST of CV886928 vs. ExPASy Swiss-Prot
Match: 5N3LA_XENLA (Cytosolic 5'-nucleotidase III-like protein A OS=Xenopus laevis GN=nt5c3l-A PE=2 SV=2)

HSP 1 Score: 122.865 bits (307), Expect = 3.716e-28
Identity = 72/183 (39.34%), Postives = 101/183 (55.19%), Query Frame = -1
Query:  362 KTHGLLIEGGLTYDTIKKSVSNALIAFRDGVVKLFEFLEERDIPVLIFSAGLADIIEEVLRQKVHKSFKNVKIVSNRMVFDKDGHLVSFKGKTIHSLNKNEHALDMAAPLHEHFGDTDGPNYDNASVKNRTNVLLLGDHIGDLGMSDGLK-YETRISVGFLNDNIENNLDNYRNAFDIVYLND 907
            K H L  E  +  D + + V  +    RDG    F  L +R+IP+ IFSAG+ D++EE++RQ       N K+VSN M FD +G L  FKG  IH+ NKN   L       E+F +          + +RTN+LLLGD +GDL M+DG+   E  I +GFLND +E   + +  ++DIV L D
Sbjct:  106 KAHDLFYEQRIQKDRLAQVVKESQATLRDGYDLFFNSLYQREIPLFIFSAGIGDVLEEIIRQ-AGVFHPNTKVVSNYMDFDDNGILTGFKGDLIHTYNKNSSVLKDT----EYFKE----------ISHRTNILLLGDTLGDLTMADGVSTVENIIKIGFLNDKVEELTEQFLQSYDIVLLRD 273          

HSP 2 Score: 22.3274 bits (46), Expect = 3.716e-28
Identity = 8/12 (66.67%), Postives = 8/12 (66.67%), Query Frame = -2
Query:  904 EKTKLMEEWWGK 939
            EK  LM EWW K
Sbjct:   95 EKYPLMVEWWSK 106          
BLAST of CV886928 vs. ExPASy Swiss-Prot
Match: 5N3LB_XENLA (Cytosolic 5'-nucleotidase III-like protein B OS=Xenopus laevis GN=nt5c3l-B PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 8.200e-28
Identity = 72/183 (39.34%), Postives = 100/183 (54.64%), Query Frame = -1
Query:  362 KTHGLLIEGGLTYDTIKKSVSNALIAFRDGVVKLFEFLEERDIPVLIFSAGLADIIEEVLRQKVHKSFKNVKIVSNRMVFDKDGHLVSFKGKTIHSLNKNEHALDMAAPLHEHFGDTDGPNYDNASVKNRTNVLLLGDHIGDLGMSDGLK-YETRISVGFLNDNIENNLDNYRNAFDIVYLND 907
            K H L  E  +  D + + V       RDG    F  L +R+IP+ IFSAG+ D++EE++RQ       N K+VSN M FD +G L  FKG  IH+ NKN   L       E+F +          + +RTN+LLLGD +GDL M+DG+   E  I +GFLND +E   + +  ++DIV L D
Sbjct:  106 KAHDLFYEQRIQKDRLAQVVKEPQATLRDGYDLFFNNLYQREIPLFIFSAGIGDVLEEIIRQ-AGVFHPNTKVVSNYMDFDDNGILTGFKGDLIHTYNKNSSVLKDT----EYFKE----------ISHRTNILLLGDTLGDLTMADGVSTVENIIKIGFLNDKVEELTEQFLQSYDIVLLRD 273          

HSP 2 Score: 22.3274 bits (46), Expect = 8.200e-28
Identity = 8/12 (66.67%), Postives = 8/12 (66.67%), Query Frame = -2
Query:  904 EKTKLMEEWWGK 939
            EK  LM EWW K
Sbjct:   95 EKYPLMVEWWSK 106          
BLAST of CV886928 vs. ExPASy Swiss-Prot
Match: 5NT3_HUMAN (Cytosolic 5'-nucleotidase 3 OS=Homo sapiens GN=NT5C3 PE=1 SV=3)

HSP 1 Score: 124.02 bits (310), Expect = 1.221e-27
Identity = 73/195 (37.44%), Postives = 115/195 (58.97%), Query Frame = -1
Query:  326 KTHGLLIEGGLTYDTIKKSVSNALIAFRDGVVKLFEFLEERDIPVLIFSAGLADIIEEVLRQKVHKSFKNVKIVSNRMVFDKDGHLVSFKGKTIHSLNKNEHALDMAAPLHEHFGDTDGPNYDNASVKNRTNVLLLGDHIGDLGMSDGL-KYETRISVGFLNDNIENNLDNYRNAFDIVYLNDAPMWEVVELVSQ 907
            K+HGLL++  L    +K+ V+ + +  ++G    F+ L++  IPV IFSAG+ D++EEV+RQ       NVK+VSN M FD+ G L  FKG+ IH  NK++ AL       E+F            +K+ +N++LLGD  GDL M+DG+   E  + +G+LND ++  L+ Y +++DIV + D  + EV   + Q
Sbjct:  155 KSHGLLVQQALPKAKLKEIVAESDVMLKEGYENFFDKLQQHSIPVFIFSAGIGDVLEEVIRQ-AGVYHPNVKVVSNFMDFDETGVLKGFKGELIHVFNKHDGALRNT----EYFN----------QLKDNSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVQDESL-EVANSILQ 333          
BLAST of CV886928 vs. ExPASy Swiss-Prot
Match: 5NT3_DANRE (Cytosolic 5'-nucleotidase 3 OS=Danio rerio GN=nt5c3 PE=2 SV=2)

HSP 1 Score: 121.709 bits (304), Expect = 6.061e-27
Identity = 69/183 (37.70%), Postives = 109/183 (59.56%), Query Frame = -1
Query:  362 KTHGLLIEGGLTYDTIKKSVSNALIAFRDGVVKLFEFLEERDIPVLIFSAGLADIIEEVLRQKVHKSFKNVKIVSNRMVFDKDGHLVSFKGKTIHSLNKNEHALDMAAPLHEHFGDTDGPNYDNASVKNRTNVLLLGDHIGDLGMSDGL-KYETRISVGFLNDNIENNLDNYRNAFDIVYLND 907
            K+H LL+E  L  D + ++V  + ++ ++G  + F+ L +  +PV IFSAGL D++EE++RQ       NVK+VSN M FD +G L  FKG+ IH  NK++ AL       E+F            +K+  N++LLGD +GDL M+DG+   E  + +G+LND +E  L+ Y ++++IV   D
Sbjct:  105 KSHTLLVEQRLEKDKLPEAVRESDVSLKEGYEQFFDRLHQHSVPVFIFSAGLGDVLEEIIRQ-AGVYHPNVKVVSNFMDFDDNGVLKGFKGELIHVYNKHDGALRNT----EYF----------KQLKDNGNIILLGDSLGDLTMADGVPNVENILKIGYLNDKVEELLEKYMDSYNIVLARD 272          
BLAST of CV886928 vs. ExPASy Swiss-Prot
Match: 5NT3L_MOUSE (Cytosolic 5'-nucleotidase III-like protein OS=Mus musculus GN=Nt5c3l PE=2 SV=2)

HSP 1 Score: 118.627 bits (296), Expect = 5.131e-26
Identity = 69/196 (35.20%), Postives = 110/196 (56.12%), Query Frame = -1
Query:  323 KTHGLLIEGGLTYDTIKKSVSNALIAFRDGVVKLFEFLEERDIPVLIFSAGLADIIEEVLRQKVHKSFKNVKIVSNRMVFDKDGHLVSFKGKTIHSLNKNEHALDMAAPLHEHFGDTDGPNYDNASVKNRTNVLLLGDHIGDLGMSDGLK-YETRISVGFLNDNIENNLDNYRNAFDIVYLNDAPMWEVVELVSQL 907
            K H LL +  +    I + V  +    R+G    F+ L + +IP+ IFSAG+ DI+EE++RQ +     N+ IVSN M F +DG L  FKG+ IH+ NKN    + ++   +              ++N+TN++LLGD IGDL M+DG+   +  + +GFLND +E   + Y +++DIV   D    E +++V+ L
Sbjct:  100 KAHSLLCQQRIQKVQIAQVVGESTAMLREGYKTFFDTLYQNNIPLFIFSAGIGDILEEIIRQ-MKVFHPNIHIVSNYMDFSEDGFLKGFKGQLIHTYNKNSSVCENSSYFQQ--------------LQNKTNIILLGDSIGDLTMADGVPGVQNILKIGFLNDKVEERRERYMDSYDIVLEKD----ETLDVVNGL 276          
BLAST of CV886928 vs. ExPASy Swiss-Prot
Match: 5NT3L_RAT (Cytosolic 5'-nucleotidase III-like protein OS=Rattus norvegicus GN=Nt5c3l PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 6.701e-26
Identity = 69/196 (35.20%), Postives = 109/196 (55.61%), Query Frame = -1
Query:  323 KTHGLLIEGGLTYDTIKKSVSNALIAFRDGVVKLFEFLEERDIPVLIFSAGLADIIEEVLRQKVHKSFKNVKIVSNRMVFDKDGHLVSFKGKTIHSLNKNEHALDMAAPLHEHFGDTDGPNYDNASVKNRTNVLLLGDHIGDLGMSDGLK-YETRISVGFLNDNIENNLDNYRNAFDIVYLNDAPMWEVVELVSQL 907
            K H LL +  +    I + V  +    R+G    F+ L   +IP+ IFSAG+ DI+EE++RQ +     N+ IVSN M F +DG L  FKG+ IH+ NKN    + ++   +              ++N+TN++LLGD IGDL M+DG+   +  + +GFLND +E   + Y +++DIV   D    E +++V+ L
Sbjct:  100 KAHSLLCQQRIQKFQIAQVVGESTAMLREGYKMFFDTLYHNNIPLFIFSAGIGDILEEIIRQ-MKVFHPNIHIVSNYMDFSEDGFLKGFKGQLIHTYNKNSSVCENSSYFQQ--------------LRNKTNIILLGDSIGDLTMADGVPGVQNILKIGFLNDKVEERRERYMDSYDIVLEKD----ETLDVVNGL 276          
BLAST of CV886928 vs. ExPASy Swiss-Prot
Match: 5NT3L_HUMAN (Cytosolic 5'-nucleotidase III-like protein OS=Homo sapiens GN=NT5C3L PE=1 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 1.264e-24
Identity = 71/196 (36.22%), Postives = 107/196 (54.59%), Query Frame = -1
Query:  323 KTHGLLIEGGLTYDTIKKSVSNALIAFRDGVVKLFEFLEERDIPVLIFSAGLADIIEEVLRQKVHKSFKNVKIVSNRMVFDKDGHLVSFKGKTIHSLNKNEHALDMAAPLHEHFGDTDGPNYDNASVKNRTNVLLLGDHIGDLGMSDGLK-YETRISVGFLNDNIENNLDNYRNAFDIVYLNDAPMWEVVELVSQL 907
            K H LL +  +    I + V  +    R+G    F  L   +IP+ IFSAG+ DI+EE++RQ +     N+ IVSN M F++DG L  FKG+ IH+ NKN    +       +F   +G          +TNV+LLGD IGDL M+DG+   +  + +GFLND +E   + Y +++DIV   D    E +++V+ L
Sbjct:  100 KAHNLLCQQKIQKFQIAQVVRESNAMLREGYKTFFNTLYHNNIPLFIFSAGIGDILEEIIRQ-MKVFHPNIHIVSNYMDFNEDGFLQGFKGQLIHTYNKNSSVCENCG----YFQQLEG----------KTNVILLGDSIGDLTMADGVPGVQNILKIGFLNDKVEERRERYMDSYDIVLEKD----ETLDVVNGL 276          
BLAST of CV886928 vs. ExPASy Swiss-Prot
Match: 5NT3L_CHICK (Cytosolic 5'-nucleotidase III-like protein OS=Gallus gallus GN=NT5C3L PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.651e-24
Identity = 66/183 (36.07%), Postives = 100/183 (54.64%), Query Frame = -1
Query:  362 KTHGLLIEGGLTYDTIKKSVSNALIAFRDGVVKLFEFLEERDIPVLIFSAGLADIIEEVLRQKVHKSFKNVKIVSNRMVFDKDGHLVSFKGKTIHSLNKNEHALDMAAPLHEHFGDTDGPNYDNASVKNRTNVLLLGDHIGDLGMSDGL-KYETRISVGFLNDNIENNLDNYRNAFDIVYLND 907
            + H LL +  +    I + V  + +  RDG  +LF+ L +  +P+ IFSAG+ D++EE++RQ  +  + NV +VSN M FD  G L  FK   IH+ NKN   L   A   +              +  RT+++LLGD +GDL M+DG+   E  + +GFLND +E     Y +A+DIV  +D
Sbjct:  105 RAHELLSQQKIQKGDIAQIVRESDVMLRDGFNELFDQLHKYSVPMFIFSAGVGDVLEEIIRQ-ANVFYPNVNVVSNYMDFDDSGVLKCFKSPLIHTYNKNNSVLQGTAYFQQ--------------LSTRTSIILLGDSMGDLTMADGVPSVENILKIGFLNDKVEEQRGRYLDAYDIVLESD 272          
The following BLAST results are available for this feature:
BLAST of CV886928 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
5NT3_MOUSE1.443e-2838.78Cytosolic 5'-nucleotidase 3 OS=Mus musculus GN=Nt5... [more]
5NT3_CHICK1.443e-2839.80Cytosolic 5'-nucleotidase III OS=Gallus gallus GN=... [more]
5N3LA_XENLA3.716e-2839.34Cytosolic 5'-nucleotidase III-like protein A OS=Xe... [more]
5N3LB_XENLA8.200e-2839.34Cytosolic 5'-nucleotidase III-like protein B OS=Xe... [more]
5NT3_HUMAN1.221e-2737.44Cytosolic 5'-nucleotidase 3 OS=Homo sapiens GN=NT5... [more]
5NT3_DANRE6.061e-2737.70Cytosolic 5'-nucleotidase 3 OS=Danio rerio GN=nt5c... [more]
5NT3L_MOUSE5.131e-2635.20Cytosolic 5'-nucleotidase III-like protein OS=Mus ... [more]
5NT3L_RAT6.701e-2635.20Cytosolic 5'-nucleotidase III-like protein OS=Ratt... [more]
5NT3L_HUMAN1.264e-2436.22Cytosolic 5'-nucleotidase III-like protein OS=Homo... [more]
5NT3L_CHICK1.651e-2436.07Cytosolic 5'-nucleotidase III-like protein OS=Gall... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_026A08_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_026_T7_A08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV886928 ID=CV886928; Name=CV886928; organism=Citrus sinensis; type=EST; length=940bp
AAGCCCTTGTGCCTAAAGGCCATATGCAAATTACAAAAGGGAGGCTTAAC
TACTCCAGTAAATATCCAAAGAAAGAACACAAAATAGAGCAATATATGAC
ATTTCTCCATTAAGCTTATCAGCTTGAATTGGCTATTTTGTTCAAATAAT
ATGAAGGCGCACTATTTGCAGAACTTGGCCTAACTACAGTCATAGAAATA
ATGCAAAGACCCAGTTGGGCATATGGGTTGAGTTTGTGTAATTAACCAAC
TCTAATTGAATGAAGCTGAGCGAAAAGCAAAGCAATATATCGAGGTGGCA
CTTATTGAGCTTCATTAGAACACAGCTGCGAGACAAGCTCAACTACTTCC
CACATGGGTGCATCATTCAAATAAACAATATCAAAGGCATTGCGGTAGTT
ATCAAGATTGTTTTCAATGTTGTCATTCAGAAACCCCACAGATATTCGAG
TTTCATATTTCAAGCCATCAGACATTCCCAGATCTCCAATATGATCACCA
AGAAGCAACACATTGGTCCTATTCTTCACTGAGGCATTGTCATAATTTGG
CCCATCAGTATCACCAAAATGTTCGTGAAGAGGAGCTGCCATATCTAGAG
CATGCTCATTTTTGTTTAGACTATGAATAGTCTTCCCTTTAAAGGATACA
AGGTGACCATCTTTATCGAAAACCATCCGATTTGATACAATCTTAACATT
TTTAAAAGATTTGTGAACTTTTTGCCTCAGAACCTCCTCAATGATGTCTG
CAAGCCCTGCTGAAAATATAAGAACTGGAATGTCTCTTTCCTCAAGAAAC
TCAAACAGTTTAACAACACCATCCCTAAAAGCAATCAAGGCATTAGAGAC
AGACTTCTTTATTGTATCGTATGTGAGGCCTCCCTCAATAAGAAGACCAT
GAGTTTTCCCCACCACTCCTCCATGAGCTTTGTTTTCTCT
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