EY665637

Overview
NameEY665637
Unique NameEY665637
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length792
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10258 contig Csv1_Contig10258:39..831. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY665637 vs. ExPASy Swiss-Prot
Match: YCF39_CYAPA (Uncharacterized protein ycf39 OS=Cyanophora paradoxa GN=ycf39 PE=3 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 2.223e-37
Identity = 85/170 (50.00%), Postives = 115/170 (67.65%), Query Frame = 1
Query:  265 SILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRPEEP--IKKVD*EG*VALIQCAKAM*IQKYVFYSIHNCDKHPEVPLMEIEDCTEHFLQDSGLPPVIFRYVGSWQGLLGKMNYLY*KKNLDWETDE 768
            SILV+GATGTLGRQIVR ALDEGY VRCLVR     A FL++WGA ++  DLS+PE++   L G+  +ID +T RP +P  + +VD +G  ALI  AKAM I+K++F+SI N +K+ +VPLM I+  TE  L++SGL   IF+  G +QGL+G+       +   W T E
Sbjct:    2 SILVIGATGTLGRQIVRSALDEGYQVRCLVR-NLRKAAFLKEWGAKLIWGDLSQPESLLPALTGIRVIIDTSTSRPTDPAGVYQVDLKGKKALIDAAKAMKIEKFIFFSILNSEKYSQVPLMRIKTVTEELLKESGLNYTIFKLCGFFQGLIGQYAVPILDQQTVWITTE 170          
BLAST of EY665637 vs. ExPASy Swiss-Prot
Match: YCF39_PORPU (Uncharacterized protein ycf39 OS=Porphyra purpurea GN=ycf39 PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.301e-34
Identity = 77/170 (45.29%), Postives = 113/170 (66.47%), Query Frame = 1
Query:  265 SILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRPEEPI--KKVD*EG*VALIQCAKAM*IQKYVFYSIHNCDKHPEVPLMEIEDCTEHFLQDSGLPPVIFRYVGSWQGLLGKMNYLY*KKNLDWETDE 768
            ++LV+GATGTLGRQIVRRALDEGY+V+C+VR     A FL++WGA +V  DL  PE+I  +  GV  VID +T RP +P   +++D +G +ALI+ AKA  +Q+++F+SI N D++P+VPLM ++    ++LQ S +   +F   G +QGL+ +       K   W T E
Sbjct:    2 TLLVIGATGTLGRQIVRRALDEGYNVKCMVRNLRKSA-FLKEWGAELVYGDLKLPESILQSFCGVTAVIDASTSRPSDPYNTEQIDLDGKIALIEAAKAAKVQRFIFFSILNADQYPKVPLMNLKSQVVNYLQKSSISYTVFSLGGFFQGLISQYAIPILDKKSVWVTGE 170          
BLAST of EY665637 vs. ExPASy Swiss-Prot
Match: YCF39_GUITH (Uncharacterized protein ycf39 OS=Guillardia theta GN=ycf39 PE=3 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.491e-33
Identity = 77/170 (45.29%), Postives = 109/170 (64.12%), Query Frame = 1
Query:  265 SILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRPEEPIK--KVD*EG*VALIQCAKAM*IQKYVFYSIHNCDKHPEVPLMEIEDCTEHFLQDSGLPPVIFRYVGSWQGLLGKMNYLY*KKNLDWETDE 768
            S+LV+GATGTLGRQIVRRALDEGY+V CLVR     A FL++WGA ++  DLS PET+P  L  +  +ID +T RP +P K  K+D EG +AL++ AK   I+++VF+S+ N   +  +PL+ ++   E +LQ S L    F+  G +QGL+ +      +K   W T E
Sbjct:    2 SLLVIGATGTLGRQIVRRALDEGYEVSCLVR-NLRKAYFLKEWGAELLYGDLSLPETLPTNLTKITAIIDASTARPSDPYKAEKIDLEGKIALVEAAKVAGIKRFVFFSVLNAQNYRHLPLVNLKCRMEEYLQTSELEYTTFQLSGFFQGLISQYAIPILEKQTIWITGE 170          
BLAST of EY665637 vs. ExPASy Swiss-Prot
Match: YCF39_PORYE (Uncharacterized protein ycf39 OS=Porphyra yezoensis GN=ycf39 PE=3 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.544e-33
Identity = 75/170 (44.12%), Postives = 112/170 (65.88%), Query Frame = 1
Query:  265 SILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRPEEPI--KKVD*EG*VALIQCAKAM*IQKYVFYSIHNCDKHPEVPLMEIEDCTEHFLQDSGLPPVIFRYVGSWQGLLGKMNYLY*KKNLDWETDE 768
            ++LV+GATGTLGRQIVRRALDEGY+V+C+VR     A FL++WGA ++  DL  PE+I  +  GV  +ID +T R  +P   +K+D +G +ALI+ AKA  +++++F+SI N +K+P+VPLM ++     FLQ S +  ++F   G +QGL+ +       K   W T E
Sbjct:    2 TLLVIGATGTLGRQIVRRALDEGYNVKCMVRNLRKSA-FLKEWGAELIYGDLKLPESILQSFCGVTAIIDASTSRLPDPYNAEKIDLDGKIALIEAAKAAKVERFIFFSILNSEKYPDVPLMNLKSQVVDFLQKSNVKYIVFSLGGFFQGLINQYAIPILDKKSVWVTGE 170          
BLAST of EY665637 vs. ExPASy Swiss-Prot
Match: YCF39_ODOSI (Uncharacterized protein ycf39 OS=Odontella sinensis GN=ycf39 PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 5.304e-31
Identity = 71/152 (46.71%), Postives = 103/152 (67.76%), Query Frame = 1
Query:  265 SILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRPEE--PIKKVD*EG*VALIQCAKAM*IQKYVFYSIHNCDKHPEVPLMEIEDCTEHFLQDSGLPPVIFRYVGSWQGLL 714
            S+L++G TGTLGRQ+V +AL +GY VRCLVR     A+FL++WGA ++  DLS+PETIP  L G+  VID +T RP +   +K+VD +G  ALI+ A+A  ++ +VF S  N ++   +PLME++   E  LQ S +P  +FR  G +QGL+
Sbjct:    2 SLLIIGGTGTLGRQVVLQALTKGYQVRCLVR-NFRKANFLKEWGAELIYGDLSRPETIPPCLQGITAVIDTSTSRPSDLDTLKQVDWDGKCALIEAAQAANVKHFVFCSSQNVEQFLNIPLMEMKFGIETKLQQSNIPYTVFRLAGFYQGLI 152          
BLAST of EY665637 vs. ExPASy Swiss-Prot
Match: YCF39_CYACA (Uncharacterized protein ycf39 OS=Cyanidium caldarium GN=ycf39 PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.226e-19
Identity = 59/151 (39.07%), Postives = 92/151 (60.93%), Query Frame = 1
Query:  265 SILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGVHTVIDCATGRPEEPIK--KVD*EG*VALIQCAKAM*IQKYVFYSIHNCDKHPEVPLMEIEDCTEHFLQDSGLPPVIFRYVGSWQGL 711
            S+LV+GAT TLGRQIV++AL +GY+V+CLVR     A FL+ WGA +V  DL  PET+P   VG   +ID +T + ++      VD     A+++ A    ++K+V +S+ N  ++ +VP  +I+   +  L  SG+  +IF  +G +Q L
Sbjct:    2 SLLVIGATSTLGRQIVKKALIQGYEVKCLVR-NSKKAAFLKAWGAILVYGDLMVPETLPQCFVGASVIIDVSTVKVKDLNNDYTVDIYCKRAVLEAAIQAKVKKFVSFSMFNSSQYLDVPSTKIKSDFDRALIKSGINYLIFTPLGFFQDL 151          
The following BLAST results are available for this feature:
BLAST of EY665637 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
YCF39_CYAPA2.223e-3750.00Uncharacterized protein ycf39 OS=Cyanophora parado... [more]
YCF39_PORPU2.301e-3445.29Uncharacterized protein ycf39 OS=Porphyra purpurea... [more]
YCF39_GUITH1.491e-3345.29Uncharacterized protein ycf39 OS=Guillardia theta ... [more]
YCF39_PORYE2.544e-3344.12Uncharacterized protein ycf39 OS=Porphyra yezoensi... [more]
YCF39_ODOSI5.304e-3146.71Uncharacterized protein ycf39 OS=Odontella sinensi... [more]
YCF39_CYACA1.226e-1939.07Uncharacterized protein ycf39 OS=Cyanidium caldari... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-102-070-H05-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665637 ID=EY665637; Name=EY665637; organism=Citrus sinensis; type=EST; length=792bp
AAGGCAAAGCAAATGGCCTTGAGATCGCTGCCGACTCAACTACCGACACG
AGGCAACCTCCATCAGCCCCATCCCCATCACCACATGAAAGGCTCACTCT
CATGGTGCCACACTTTAACTCCTCTGCCCCTCCTCTCCCCCTCCGCCAAC
TCCTTAGGGAAAGTTTGTACACAACAAATGGTGGTGAAATGTAGTGCCGG
TGGAGGTACTAGAGGTACTGTGCAGGCGGTGAATATGAGTCCAGGGACAC
CGGTGAGACCCACGAGTATACTAGTTGTTGGTGCAACGGGGACACTTGGC
AGGCAGATAGTCAGGCGTGCACTGGATGAAGGTTACGACGTTAGGTGCCT
TGTGAGGCCCAGACCCGCCCCTGCTGATTTTCTCCGCGATTGGGGTGCCA
CCGTTGTCAATGCAGACTTGAGCAAACCAGAGACCATACCTGCAACATTG
GTTGGTGTTCATACAGTCATTGACTGTGCCACAGGCCGTCCAGAAGAGCC
TATCAAAAAAGTAGACTGAGAAGGATAAGTCGCTCTTATACAATGCGCCA
AAGCAATGTGAATCCAGAAGTATGTATTTTATTCAATTCACAACTGTGAC
AAGCATCCTGAAGTCCCACTAATGGAGATCGAGGATTGCACAGAACATTT
TCTGCAGGACTCCGGCCTACCTCCCGTAATATTCCGTTATGTGGGTTCAT
GGCAAGGCTTATTGGGCAAAATGAATTACCTATACTAGAAAAAAAATTTG
GACTGGGAAACGGATGAATAATTCAAAATGCAAACATGGAAA
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