CV886908

Overview
NameCV886908
Unique NameCV886908
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length878
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CV886908 vs. ExPASy Swiss-Prot
Match: TTHL_ARATH (Uric acid degradation bifunctional protein TTL OS=Arabidopsis thaliana GN=TTL PE=1 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.202e-58
Identity = 103/202 (50.99%), Postives = 126/202 (62.38%), Query Frame = 2 
Query:  275 DGGRWSKAEQSTALATANESSSQELSDWNNRYRLRFGFIFIICASGRTAAEILAELKKRYTNRPIIEFEIAAQEQMKITEXXXXXXXXXXXXXXXXTFQYSATAKT-AEDRVSIIEGHLCASTEASAGKISQIPTRTRLPITTHVLDVSQGSPAAGVEVRLEMWKGIQPRPLFGETDVSGWVYQGSSTTNKDGRCGQLMGMI 877
            D  R S +EQSTA AT + S+ QEL++WN  Y+ +FGFIFIICASGRT AE+L  LK+RY NRPI+E EIAA EQMKITE                T   S+   T  +DR+ II GHL  + EA A      P R+R PITTHVLDVS+G+PAAGVEV LE+W G    P F       W   G+S T++DGR G LM ++
Sbjct:   72 DFARRSVSEQSTAFATTSASALQELAEWNVLYKKKFGFIFIICASGRTHAEMLHALKERYENRPIVELEIAAMEQMKITELRMAKLFSDKAKVISETDSSSSPVSTKPQDRLRIIGGHLNVAAEAKA------PKRSRPPITTHVLDVSRGAPAAGVEVHLEVWSG-TTGPSFVHGGGGVWSSVGTSATDRDGRSGPLMDLV 266

HSP 2 Score: 72.0182 bits (175), Expect = 1.202e-58
Identity = 31/54 (57.41%), Postives = 42/54 (77.78%), Query Frame = 3 
Query:    9 CCGSTKFAKEMASASPFASLNQAVSAARHIWFNLVDVNGWLDAFSAHPQIGQSP 170
            CCGS++FAK+M+++ P  S  +A+  AR IWFN V+V  WL+AFSAHPQIG +P
Sbjct:   13 CCGSSEFAKQMSTSGPLTS-QEAIYTARDIWFNQVNVTDWLEAFSAHPQIGNTP 65
The following BLAST results are available for this feature:
BLAST of CV886908 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
TTHL_ARATH1.202e-5850.99Uric acid degradation bifunctional protein TTL OS=... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS04_2_025H10_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_025_T7_H10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV886908 ID=CV886908; Name=CV886908; organism=Citrus sinensis; type=EST; length=878bp
TGTTGGGATGCTGCGGTAGCACCAAATTTGCGAAAGAGATGGCGTCGGCC
TCACCTTTTGCATCATTGAATCAAGCCGTCTCAGCAGCTCGACACATCTG
GTTCAACCTGGTTGATGTAAACGGCTGGCTTGATGCATTTTCGGCTCATC
CTCAGATCGGCCAATCTCCGTCTTCACAGTTTTCTTTTCTTACTCTTTTC
TCGTCTCTTATTACAATTACTTGATAGATTCTAGCTTTTTATTTTATTTT
TTATATCCTATTAATTTCTTTTTGGATGGTGGTAGGTGGAGCAAGGCCGA
GCAGTCCACTGCTTTAGCAACTGCTAATGAATCTAGCTCGCAGGAACTGT
CCGACTGGAATAATCGGTACAGGCTGAGATTTGGATTTATATTTATTATA
TGTGCATCGGGGAGGACGGCTGCCGAAATACTTGCTGAGTTGAAGAAACG
ATACACAAACAGGCCCATAATTGAGTTTGAGATTGCTGCTCAGGAGCAAA
TGAAAATAACTGAATTACGTCTGGCAAAGCTCTTCTCAGCTAAAGCAAAA
GCTTCTTCTGCAACTTTCCAGTATTCTGCAACTGCAAAAACAGCAGAAGA
TCGTGTGAGCATCATAGAAGGACACCTATGTGCTTCTACTGAAGCTTCAG
CAGGGAAAATATCTCAAATCCCTACAAGAACTCGACTACCAATTACAACA
CATGTCTTGGATGTTTCTCAAGGGTCTCCAGCTGCGGGTGTTGAGGTACG
TTTGGAAATGTGGAAGGGCATCCAACCACGTCCCCTCTTTGGCGAAACAG
ATGTCAGTGGGTGGGTGTACCAGGGGTCTTCAACTACAAATAAAGATGGA
CGATGTGGTCAATTGATGGGCATGATTG
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