CV886907

Overview
NameCV886907
Unique NameCV886907
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length874
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV886907 vs. ExPASy Swiss-Prot
Match: TTHL_ARATH (Uric acid degradation bifunctional protein TTL OS=Arabidopsis thaliana GN=TTL PE=1 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 4.252e-48
Identity = 106/197 (53.81%), Postives = 128/197 (64.97%), Query Frame = -3
Query:  285 PIIEFEIAAQEQMKITEXXXXXXXXXXXXXXXATFQYSATAKTA-EDRVSIIEGHLCASTEASAGKISQIPTRTRLPITTHVLDVSQGSPAAGVEVRLEMWKGIQPRPLFGETDVSGWVYQGSSTTNKDGRCGQLMGMIEDLNPGFYKITFNTGKYCPEGFFPYVSIVFEIRESQKREHFHVPLLLSPFSFTTYRGS 872
            PI+E EIAA EQMKITE                T   S+   T  +DR+ II GHL  + EA A      P R+R PITTHVLDVS+G+PAAGVEV LE+W G    P F       W   G+S T++DGR G LM +++ LNPG Y+I+F+T KY P  FFPYVSIVF++ ESQK EHFHVPLLL+PFSF+TYRGS
Sbjct:  135 PIVELEIAAMEQMKITELRMAKLFSDKAKVISETDSSSSPVSTKPQDRLRIIGGHLNVAAEAKA------PKRSRPPITTHVLDVSRGAPAAGVEVHLEVWSGTTG-PSFVHGGGGVWSSVGTSATDRDGRSGPLMDLVDALNPGTYRISFDTAKYSPGCFFPYVSIVFQVTESQKWEHFHVPLLLAPFSFSTYRGS 324          
BLAST of CV886907 vs. ExPASy Swiss-Prot
Match: HIUH_MOUSE (5-hydroxyisourate hydrolase OS=Mus musculus GN=Urah PE=1 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.058e-18
Identity = 57/126 (45.24%), Postives = 75/126 (59.52%), Query Frame = -3
Query:  285 PITTHVLDVSQGSPAAGVEVRLEMWKGIQPRPLFGETDVSGWVYQGSSTTNKDGRCGQLMGMIEDLNPGFYKITFNTGKYCPE----GFFPYVSIVFEI-RESQKREHFHVPLLLSPFSFTTYRGS 647
            P+TTHVLD + G PA G+ +RL             E     W+   +S TN DGRC  L+   + + PG YK+ F+T +Y  E     F+PYV +VF I +E+QK   FHVPLLLSP+S+TTYRGS
Sbjct:    7 PLTTHVLDTASGLPAQGLCLRLSRL----------EAPCQQWMELRTSYTNLDGRCPGLLTPSQ-IKPGTYKLFFDTERYWKERGQESFYPYVEVVFTITKETQK---FHVPLLLSPWSYTTYRGS 118          
BLAST of CV886907 vs. ExPASy Swiss-Prot
Match: HIUH_DANRE (5-hydroxyisourate hydrolase OS=Danio rerio GN=urah PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.069e-17
Identity = 58/155 (37.42%), Postives = 80/155 (51.61%), Query Frame = -3
Query:  285 DRVSIIEGHLCASTEASAGKISQIPTRTRLPITTHVLDVSQGSPAAGVEVRLEMWKGIQPRPLFGETDVSGWVYQGSSTTNKDGRCGQLMGMIEDLNPGFYKITFNTGKYCPE----GFFPYVSIVFEIRESQKREHFHVPLLLSPFSFTTYRGS 737
            +R+  I GH+      SA K   +      P++THVL+++QG P A + + L     +           S W    +  TN DGRC  L+   E+   G YK+ F TGKY        F+PYV IVF I  +   +H+HVPLLLS FS++TYRGS
Sbjct:    2 NRLQHIRGHI-----VSADKHINMSATLLSPLSTHVLNIAQGVPGANMTIVLHRLDPVS----------SAWNILTTGITNDDGRCPGLITK-ENFIAGVYKMRFETGKYWDALGETCFYPYVEIVFTITNTS--QHYHVPLLLSRFSYSTYRGS 138          
BLAST of CV886907 vs. ExPASy Swiss-Prot
Match: HIUH_PSEAE (5-hydroxyisourate hydrolase OS=Pseudomonas aeruginosa GN=PA1518 PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.803e-14
Identity = 48/128 (37.50%), Postives = 68/128 (53.12%), Query Frame = -3
Query:  285 ITTHVLDVSQGSPAAGVEVRLEMWKGIQPRPLFGETDVSGWVYQGSSTTNKDGRCGQLMGMIEDLNPGFYKITFNTGKY-------CPE-GFFPYVSIVFEIRESQKREHFHVPLLLSPFSFTTYRGS 644
            +TTHVLD + G P  G+++ L   +G Q   +             ++ TN DGRC Q +   ED  PG Y++ FN G Y        PE  F   V + F I  +   +H+HVPLL+SP+S++TYRGS
Sbjct:   13 LTTHVLDSAHGCPGHGIKIELYRVEGQQLELI------------ATTLTNHDGRCDQPVLQGEDFRPGVYQLVFNAGDYYRARGVQLPEPAFLDQVVLRFGIASAD--DHYHVPLLISPYSYSTYRGS 126          
BLAST of CV886907 vs. ExPASy Swiss-Prot
Match: HIUH2_CAEEL (Probable 5-hydroxyisourate hydrolase ZK697.8 OS=Caenorhabditis elegans GN=ZK697.8 PE=2 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 6.851e-14
Identity = 51/146 (34.93%), Postives = 78/146 (53.42%), Query Frame = -3
Query:  285 LCASTEASAGKISQIPTRTRLPITTHVLDVSQGSPAAGVEVRLEMWKGIQPRPLFGETDVSGWVYQGSSTTNKDGRCGQLMGMIEDLNPGFYKITFNTGKYCP----EGFFPYVSIVFEIRESQKREHFHVPLLLSPFSFTTYRGS 710
            + A+T  S  +++ +PT +   I+ HVLD+S GSPA G+++   +               +GW   GS  T  +GR   +      L PG Y++ + T  Y      E F+PYV +VF IR +   +H+HVPL LSP+ ++TYRGS
Sbjct:   10 IAAATVISNAELA-VPTAS---ISAHVLDISGGSPAGGIQILAFILLN------------NGWTNIGSQFTQDNGRVDWVSPDFT-LIPGTYRLVYITEPYYTAKNVESFYPYVEVVFNIRNAT--QHYHVPLTLSPWGYSTYRGS 136          
BLAST of CV886907 vs. ExPASy Swiss-Prot
Match: HIUH_SALTY (5-hydroxyisourate hydrolase OS=Salmonella typhimurium GN=yedX PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 8.948e-14
Identity = 47/124 (37.90%), Postives = 66/124 (53.23%), Query Frame = -3
Query:  285 ITTHVLDVSQGSPAAGVEVRLEMWKGIQPRPLFGETDVSGWVYQGSSTTNKDGRCGQLMGMIEDLNPGFYKITFNTGKYCP----EGFFPYVSIVFEIRESQKREHFHVPLLLSPFSFTTYRGS 644
            ++ H+LD   G PA GVEV LE  K             +GW    +  T++DGR   L    +   PG Y++ F TG+Y      + FFP + + F I  S+  EH+HVPLLLS + ++TYRGS
Sbjct:   28 LSVHILDQQTGKPAPGVEVVLEQKKD------------NGWTQLNTGHTDQDGRIKALWPE-KAAAPGDYRVIFKTGQYFESKKLDTFFPEIPVEFHI--SKTNEHYHVPLLLSQYGYSTYRGS 136          
BLAST of CV886907 vs. ExPASy Swiss-Prot
Match: HIUH_SALTI (5-hydroxyisourate hydrolase OS=Salmonella typhi GN=yedX PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 8.948e-14
Identity = 47/124 (37.90%), Postives = 66/124 (53.23%), Query Frame = -3
Query:  285 ITTHVLDVSQGSPAAGVEVRLEMWKGIQPRPLFGETDVSGWVYQGSSTTNKDGRCGQLMGMIEDLNPGFYKITFNTGKYCP----EGFFPYVSIVFEIRESQKREHFHVPLLLSPFSFTTYRGS 644
            ++ H+LD   G PA GVEV LE  K             +GW    +  T++DGR   L    +   PG Y++ F TG+Y      + FFP + + F I  S+  EH+HVPLLLS + ++TYRGS
Sbjct:   28 LSVHILDQQTGKPAPGVEVVLEQKKD------------NGWTQLNTGHTDQDGRIKALWPE-KAAAPGDYRVIFKTGQYFESKKLDTFFPEIPVEFHI--SKTNEHYHVPLLLSQYGYSTYRGS 136          
BLAST of CV886907 vs. ExPASy Swiss-Prot
Match: HIUH_SALDU (5-hydroxyisourate hydrolase OS=Salmonella dublin GN=yedX PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 8.948e-14
Identity = 47/124 (37.90%), Postives = 66/124 (53.23%), Query Frame = -3
Query:  285 ITTHVLDVSQGSPAAGVEVRLEMWKGIQPRPLFGETDVSGWVYQGSSTTNKDGRCGQLMGMIEDLNPGFYKITFNTGKYCP----EGFFPYVSIVFEIRESQKREHFHVPLLLSPFSFTTYRGS 644
            ++ H+LD   G PA GVEV LE  K             +GW    +  T++DGR   L    +   PG Y++ F TG+Y      + FFP + + F I  S+  EH+HVPLLLS + ++TYRGS
Sbjct:   28 LSVHILDQQTGKPAPGVEVVLEQKKD------------NGWTQLNTGHTDQDGRIKALWPE-KAAAPGDYRVIFKTGQYFESKKLDTFFPEIPVEFHI--SKTNEHYHVPLLLSQYGYSTYRGS 136          
BLAST of CV886907 vs. ExPASy Swiss-Prot
Match: HIUH1_CAEEL (Probable 5-hydroxyisourate hydrolase R09H10.3 OS=Caenorhabditis elegans GN=R09H10.3 PE=1 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 8.948e-14
Identity = 49/134 (36.57%), Postives = 71/134 (52.99%), Query Frame = -3
Query:  285 SQIPTRTRLPITTHVLDVSQGSPAAGVEVRLEMWKGIQPRPLFGETDVSGWVYQGSSTTNKDGRCGQLMGMIEDLNPGFYKITFNTGKYCP----EGFFPYVSIVFEIRESQKREHFHVPLLLSPFSFTTYRGS 674
            S +PT +   I+ HVLD+S GSPA GV++   + +               W   GS  T  +GR   +      L PG Y++ + T  Y      E F+PYV +VF IR++   +H+HVPL LSP+ ++TYRGS
Sbjct:   20 SAVPTAS---ISAHVLDISGGSPAGGVQILAYIQQN------------DDWTKIGSEFTQDNGRVDWVSPDFT-LIPGTYRLVYITEPYYKAKNVESFYPYVEVVFNIRDAT--QHYHVPLTLSPWGYSTYRGS 135          
BLAST of CV886907 vs. ExPASy Swiss-Prot
Match: HIUH1_RHIME (5-hydroxyisourate hydrolase 1 OS=Rhizobium meliloti GN=RB0789 PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.878e-12
Identity = 43/134 (32.09%), Postives = 68/134 (50.75%), Query Frame = -3
Query:  285 QIPTRTRLPITTHVLDVSQGSPAAGVEVRLEMWKGIQPRPLFGETDVSGWVYQGSSTTNKDGRCGQLMGMIEDLNPGFYKITFNTGKY----CPEGFFPYVSIV-FEIRESQKREHFHVPLLLSPFSFTTYRGS 671
            Q+   T   +TTHVLD + G PA+ + + L   +G +P  L             S+ TN DGRC   +     +  G Y++ F+ G+Y       G  P++ ++      + +  H+HVPLLLSP+ ++TYRGS
Sbjct:    2 QVQDGTPGRLTTHVLDTASGRPASNLRIDLYRIEGERPELL------------SSTRTNDDGRCDAPLLNGSTMETGTYELRFHAGEYLGTAAERGANPFLDVIPIRFGIADRAAHYHVPLLLSPYGYSTYRGS 123          
The following BLAST results are available for this feature:
BLAST of CV886907 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
TTHL_ARATH4.252e-4853.81Uric acid degradation bifunctional protein TTL OS=... [more]
HIUH_MOUSE2.058e-1845.245-hydroxyisourate hydrolase OS=Mus musculus GN=Ura... [more]
HIUH_DANRE5.069e-1737.425-hydroxyisourate hydrolase OS=Danio rerio GN=urah... [more]
HIUH_PSEAE1.803e-1437.505-hydroxyisourate hydrolase OS=Pseudomonas aerugin... [more]
HIUH2_CAEEL6.851e-1434.93Probable 5-hydroxyisourate hydrolase ZK697.8 OS=Ca... [more]
HIUH_SALTY8.948e-1437.905-hydroxyisourate hydrolase OS=Salmonella typhimur... [more]
HIUH_SALTI8.948e-1437.905-hydroxyisourate hydrolase OS=Salmonella typhi GN... [more]
HIUH_SALDU8.948e-1437.905-hydroxyisourate hydrolase OS=Salmonella dublin G... [more]
HIUH1_CAEEL8.948e-1436.57Probable 5-hydroxyisourate hydrolase R09H10.3 OS=C... [more]
HIUH1_RHIME2.878e-1232.095-hydroxyisourate hydrolase 1 OS=Rhizobium melilot... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_025H10_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_025_T3_H10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV886907 ID=CV886907; Name=CV886907; organism=Citrus sinensis; type=EST; length=874bp
ACAAGACCTCCTTATTTATAATAGGGTAAACCCACTTCTCCAAGTTATAC
TGAAAATAAAAACCTAAAACACATCATAATTGACTCTAATTAAAAATAGA
AAACATCAAAATACCTAAATAAAAAAATTCTAAAATCTTAAAATAACATC
TTTTTTTTTTTTGTTCAATAAATAACAATGGCTAAATTAAACCACATAAC
CACAGCCATGACCAACCCTATTGAATATTTGCAACACAAGCACACAATGT
TTCTATTAGTCAACAAACCAACCATACAATTCTAGCTTCCACGATAGGTA
GTGAATGAGAATGGTGAGAGCAGCAGAGGAACATGAAAATGTTCTCGCTT
TTGTGACTCCCTGATCTCAAACACAATAGAAACATAGGGAAAAAATCCTT
CTGGACAGTATTTACCAGTGTTGAAAGTTATCTTGTAAAATCCAGGGTTC
AAGTCTTCAATCATGCCCATCAATTGACCACATCGTCCATCTTTATTTGT
AGTTGAAGACCCCTGGTACACCCACCCACTGACATCTGTTTCGCCAAAGA
GGGGACGTGGTTGGATGCCCTTCCACATTTCCAAACGTACCTCAACACCC
GCAGCTGGAGACCCTTGAGAAACATCCAAGACATGTGTTGTAATTGGTAG
TCGAGTTCTTGTAGGGATTTGAGATATTTTCCCTGCTGAAGCTTCAGTAG
AAGCACATAGGTGTCCTTCTATGATGCTCACACGATCTTCTGCTGTTTTT
GCAGTTGCAGAATACTGGAAAGTTGCAGAAGAAGCTTTTGCTTTAGCTGA
GAAGAGCTTTGCCAGACGTAATTCAGTTATTTTCATTTGCTCCTGAGCAG
CAATCTCAAACTCAATTATGGGCC
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