CV886901
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV886901 vs. ExPASy Swiss-Prot
Match: IF5Z_ARATH (Probable eukaryotic translation initiation factor 5-2 OS=Arabidopsis thaliana GN=At1g77840 PE=2 SV=1) HSP 1 Score: 199.904 bits (507), Expect = 1.642e-50 Identity = 112/213 (52.58%), Postives = 141/213 (66.20%), Query Frame = 1 Query: 139 QWQTDTSLEAAKQRIQEQLSSVTADMVMLXXXXXXXXXXXXXPDRESKGHENGASGP---NTHLADQMKDFLKKGASASQFKSFLGSLSGTAQ-VMDALFVALFDGIEKGFAKEVTKKKNYLAAAT--QEEGSQMVLLHSLESFCGK-ARPXXXXXXXXXXXXXYDNDLLEEEFILDWYQKGLGGANKNSQVWKNAKPVIEWLQNAESETEED 756 +WQTDTS EAA++R+ EQLS+ TA+MVML P +S G+ P +L MK++LKKG+ S KSF+ SLS Q +MDALF ALFDG+ KGFAKEVTKKKNYLAAA QE+GSQM LL+S+ +FCGK YD D++EEE +LDWY+KGL GA+K+S VWKN KP +EWLQ+AESE+EE+ Sbjct: 227 EWQTDTSREAAEKRMMEQLSAKTAEMVMLSAMEVEEKKA---PKSKSNGNVVKTENPPPQEKNLVQDMKEYLKKGSPISALKSFISSLSEPPQDIMDALFNALFDGVGKGFAKEVTKKKNYLAAAATMQEDGSQMHLLNSIGTFCGKNGNEEALKEVALVLKALYDQDIIEEEVVLDWYEKGLTGADKSSPVWKNVKPFVEWLQSAESESEEE 436
BLAST of CV886901 vs. ExPASy Swiss-Prot
Match: IF5_PHAVU (Eukaryotic translation initiation factor 5 OS=Phaseolus vulgaris GN=EIF5 PE=2 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 2.219e-47 Identity = 105/207 (50.72%), Postives = 133/207 (64.25%), Query Frame = 1 Query: 139 QWQTDTSLEAAKQRIQEQLSSVTADMVMLXXXXXXXXXXXXXPDRESKGHENGASGPNTHLADQMKDFLKKGASASQFKSFLGSLSGTAQV-MDALFVALFDGIEKGFAKEVTKKKNYLAAATQEEGSQMVLLHSLESFCGKARPXXXXXXXXXXXXXYDNDLLEEEFILDWYQKGLGGANKNSQVWKNAKPVIEWLQNAESETEED 756 QW TDTSL+A++QRI+EQLS+VTADMVML ++ G +NG S + ++K LKKG AS+ S L +L AQ M AL ALF+G EKGF +E KKKNY AAA EEGSQ++LLH++E FC K YD D+LEEE I+ WYQKGL G NKNS++WKNA+P I+WLQNAESE++E+ Sbjct: 239 QWLTDTSLDASRQRIKEQLSAVTADMVMLTTDEPEKKKKAA--SNQNGGSQNGNSKNYGTVVAEVKANLKKGFGASELLSHLAALPVPAQEKMSALVEALFEGTEKGFGRETLKKKNYFAAAVAEEGSQILLLHAIEEFCCKPNSNALKEVALVLKTLYDADVLEEEAIVLWYQKGLKGDNKNSKIWKNAQPFIDWLQNAESESDEE 443
BLAST of CV886901 vs. ExPASy Swiss-Prot
Match: IF5Y_ARATH (Probable eukaryotic translation initiation factor 5-1 OS=Arabidopsis thaliana GN=At1g36730 PE=2 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 8.453e-39 Identity = 104/216 (48.15%), Postives = 130/216 (60.19%), Query Frame = 1 Query: 139 QWQTDTSLEAAKQRIQEQLSSVTADMVMLXXXXXXXXXXXXXPDRESKGHENGAS--GPNTH--LADQMKDFLKKGASASQFKSFLGSLSGTAQ-VMDALFVALFDGIEKGFAKEVTKKKNYLAA--ATQEEG---SQMVLLHSLESFCGKARPXXXXXXXXXXXXXYDNDLLEEEFILDWYQKGLGGANKNSQVWKNAKPVIEWLQNAESETEED 756 QWQTDTS EAA++R++EQLS+VTA+MVML E + HENG S N H L +++K+ L G+S +Q K+ L S S Q MDALF ALF G KGFAKEV KKK YL A QEE +QM LL+ +ESFC KA YD D+L+E+ I++WY KG+ K+S V KN P IEWLQNAESE+EE+ Sbjct: 229 QWQTDTSREAAEKRMKEQLSAVTAEMVMLSTVEEKKPVAEVKKAPE-QVHENGNSKIPENAHEKLVNEIKELLSSGSSPTQLKTALASNSANPQEKMDALFSALFGGTGKGFAKEVIKKKKYLLALMMMQEEAGAPAQMGLLNGIESFCMKASAEAAKEVALVIKGLYDEDILDEDVIVEWYNKGV----KSSPVLKNVTPFIEWLQNAESESEEE 439
BLAST of CV886901 vs. ExPASy Swiss-Prot
Match: IF5_MAIZE (Eukaryotic translation initiation factor 5 OS=Zea mays GN=EIF5 PE=2 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 1.349e-36 Identity = 94/220 (42.73%), Postives = 121/220 (55.00%), Query Frame = 1 Query: 139 QWQTDTSLEAAKQRIQEQLSSVTADMVMLXXXXXXXXXXXXXPDRESKGHENGAS-------------GPNTHLADQMKDFLKKGASASQFKSFLGSLSGTAQ-VMDALFVALFDGIEKGFAKEVTKKKNYLAAATQEEGSQMVLLHSLESFCGKARPXXXXXXXXXXXXXYDNDLLEEEFILDWYQKGLGGANKNSQVWKNAKPVIEWLQNAESETEED 756 QWQTDTS+EAAKQR+QEQLS+ TA+MVML G NG++ P L +K L + SQ K+ L S + Q VM+A ALF G+ KGF KEV K K YLA A +EG+Q +L+ ++E+F GK P YD D+L+EE I+DWY + A K+SQV KNAKP +EWLQ+AES+ E D Sbjct: 234 QWQTDTSIEAAKQRMQEQLSAATAEMVMLSTEETEKKMKQPT---HKDGSTNGSAKEIPNDKPAVTKPSPYEELIGDIKASLGSAPTPSQLKAVLASSTLPPQDVMNAPLEALFGGVGKGFTKEVVKNKKYLAVAVPDEGAQTLLVQAIEAFGGKCNPEALKEVPVVLKALYDGDILDEETIVDWYNDAV-AAGKDSQVVKNAKPFVEWLQSAESDEEGD 449 The following BLAST results are available for this feature:
BLAST of CV886901 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CV886901 ID=CV886901; Name=CV886901; organism=Citrus sinensis; type=EST; length=897bpback to top |