CV886900

Overview
NameCV886900
Unique NameCV886900
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length947
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV886900 vs. ExPASy Swiss-Prot
Match: YJX4_SCHPO (CRAL-TRIO domain-containing protein C23B6.04c OS=Schizosaccharomyces pombe GN=SPCC23B6.04c PE=1 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 1.009e-29
Identity = 76/212 (35.85%), Postives = 113/212 (53.30%), Query Frame = -3
Query:  241 CLKRYLEARNWNVDKAKKMLEETLKWRSTYRPEEIRWNEIAVEGETGKLFRAGFHDRHGRTVLILRPGMQNTASIDNQMRHLVYLIENAILNLPEGQEQMAWLIDFTGWSLSTSVPIRSARETINILQNHYPERLAIAFLYNPPRIFEAFWKVVKYFLDAKTFQKVKFVYPKNKDSVEVMSSYFDEENLPTEFGGKATLHYDHEEFSKLMIQ 876
            C+ RYL A  W+V  AKK + +TL WR  +    +  +EI  E  TGK    G+ D+ GR  L L P  QNT +   Q+RHLV+ +E AI  +P G E +A LI+F   S  ++  +   +E +NILQ HY ERL  A + N P     F+K++  F+D  T +K+KF  P        +  Y  ++ L + FGG     Y HE++   +++
Sbjct:  637 CILRYLRATKWHVSNAKKRIVDTLVWRRHFGVNNMDPDEIQEENATGKQVLLGY-DKDGRPCLYLYPARQNTKTSPLQIRHLVFSLECAIDLMPPGVETLALLINFKSSSNRSNPSVGQGKEVLNILQTHYCERLGRALVINIPWAVWGFFKLISPFIDPITREKLKFNEP--------LDRYVPKDQLDSNFGGSLHFEYHHEKYWPQLVE 839          
BLAST of CV886900 vs. ExPASy Swiss-Prot
Match: RSC5_DICDI (Random slug protein 5 OS=Dictyostelium discoideum GN=rsc5 PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 1.234e-27
Identity = 71/238 (29.83%), Postives = 130/238 (54.62%), Query Frame = -3
Query:  253 KEVKAAIGPLYGRS-LQYCSDACLKRYLEARNWNVDKAKKMLEETLKWRSTYRPEEIR-WNEIAVEGETGKLFRAGFHDRHGRTVLILRPGMQNTASIDNQM--RHLVYLIENAI--LNLPEGQEQMAWLIDFTGWSLSTSVPIRSARETINILQNHYPERLAIAFLYNPPRIFEAFWKVVKYFLDAKTFQKVKFVYPKNKDSVEVMS---SYFDEENLPTEFGGKATLHYDHEEFSK 939
            KE+K+    L   + + +C+D C  RYL ARN+ V K++KML +TL+WR  +RP++I+   +I   G  G ++     D+ GR ++   P      ++ +++  ++LVY +E     ++ P+G EQ  +++D+  +  S ++ +++  E ++ L +H PER+  +   +PP +F   WK++  FL+  T  KV+F+  K  D     +    Y D ENL    GG    +Y+ +E+ K
Sbjct:   53 KEIKSNFSDLTDPTDIAFCTDMCFLRYLRARNYIVSKSEKMLRDTLEWRKKFRPQDIQLGGDIREIGSAGCVY-VNKRDKKGRPIIFAVPRNDTLKNVPSELKFKNLVYWLEQGFSRMDEPKGIEQFCFIVDYKDFG-SGNMDMKTNLEAMHFLLDHCPERMGQSLFLDPPALFWFAWKIISPFLNEVTLSKVRFINSKKVDGKRTFAELLEYVDIENLEQNLGGNLDYNYNIDEYLK 288          
BLAST of CV886900 vs. ExPASy Swiss-Prot
Match: PDR16_YEAST (Phosphatidylinositol transfer protein PDR16 OS=Saccharomyces cerevisiae GN=PDR16 PE=1 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.667e-24
Identity = 74/240 (30.83%), Postives = 116/240 (48.33%), Query Frame = -3
Query:  241 PLYGRSLQYCSDACLKRYLEARNWNVDKAKKMLEETLKWRSTY--------RPEEIRWNEIAVEGETGKLFRAGFHDRHGRTVLILRPGMQNTASIDNQMRHLVYLIENAILNLPEGQEQMAWLIDFTGW-------SLSTSVPIRSARETINILQNHYPERLAIAFLYNPPRIFEAFWKVVKYFLDAKTFQKVKFVYPKNKDSVEVMSSYFDEENLPTEFGGKATLHYDHEEFSKLMIQ 915
            PL      + +  C  RYL A  W +      +  TL WR  +          ++I  + +AVE E+GK    G+ +   R +L L+PG QNT +   Q++HLV+++E  I  +P GQ+ +A LIDF  +         S   PI   +E ++ILQ HYPERL  A L N P +   F K++  F+D  T +K+ F  P  K        Y  +  L + +GG     Y+H+ +   +++
Sbjct:   76 PLEEEEKAWLTRECFLRYLRATKWVLKDCIDRITMTLAWRREFGISHLGEEHGDKITADLVAVENESGKQVILGY-ENDARPILYLKPGRQNTKTSHRQVQHLVFMLERVIDFMPAGQDSLALLIDFKDYPDVPKVPGNSKIPPIGVGKEVLHILQTHYPERLGKALLTNIPWLAWTFLKLIHPFIDPLTREKLVFDEPFVK--------YVPKNELDSLYGGDLKFKYNHDVYWPALVE 306          
BLAST of CV886900 vs. ExPASy Swiss-Prot
Match: PDR17_YEAST (Phosphatidylinositol transfer protein PDR17 OS=Saccharomyces cerevisiae GN=PDR17 PE=1 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 1.081e-23
Identity = 77/229 (33.62%), Postives = 111/229 (48.47%), Query Frame = -3
Query:  241 YCSDACLKRYLEARNWNVDKAKKMLEETLKWRS----TYRPEE---IRWNEIAVEGETGKLFRAGFHDRHGRTVLILRPGMQNTASIDNQMRHLVYLIENAILNLPEGQEQMAWLIDFTGWS-----LSTSVPIRSARETINILQNHYPERLAIAFLYNPPRIFEAFWKVVKYFLDAKTFQKVKFVYPKNKDSVEVMSSYFDEENLPTEFGGKATLHYDHEEFSKLMIQ 891
            + S  C  RYL A  WN   A K L +TL WR     T+  E+   +  +++AVE ETGK    GF D   R +  ++ G QNT S   Q++ LVY++E A    P+G E++  L+DF  +         + PI  AR  +N++Q+HYPERLA   L N P    AF K++  FLD  T  K  F  P          ++ +   L   + G     Y HE +   M++
Sbjct:   89 WLSRECFLRYLRANKWNTANAIKGLTKTLVWRREIGLTHGKEDKDPLTADKVAVENETGKQVILGF-DNAKRPLYYMKNGRQNTESSFRQVQELVYMMETATTVAPQGVEKITVLVDFKSYKEPGIITDKAPPISIARMCLNVMQDHYPERLAKCVLINIPWFAWAFLKMMYPFLDPATKAKAIFDEP--------FENHIEPSQLDALYNGLLDFKYKHEVYWPDMVK 308          
BLAST of CV886900 vs. ExPASy Swiss-Prot
Match: CSR1_ASHGO (Phosphatidylinositol transfer protein CSR1 OS=Ashbya gossypii GN=CSR1 PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 6.351e-16
Identity = 59/218 (27.06%), Postives = 104/218 (47.71%), Query Frame = -3
Query:  271 DACLKRYLEARNWNVDKAKKMLEETLKWR-STYRPEEIRWNE-----------IAVEGETGKLFRAGFHDRHGRTVLILRPGMQNTASIDNQ--MRHLVYLIENAILNLPEGQEQMAWLIDFTGWSLSTSVPIRSARETINILQNHYPERLAIAFLYNPPRIFEAFWKVVKYFLDAKTFQKVKFVYPKNKDSVEVMSSYFDEENLPTEFGGKATLHYD 882
            D  L R++ AR W+++KA  M+  +L+WR +  +PE+I +             I  + E GK    GF D++G  ++ +RP + + A         + +++IE A L L E  +    L D +G+S++ ++     +  I   + HYPE L   F++  P IF   W ++K +LD     K+ F       +   +  +   E +P E GGK   ++D
Sbjct:  138 DNLLLRFVRARKWDINKAMIMMAHSLRWRLNEGKPEDIVFGGERGAQKADKKGIVKQLELGKATVRGF-DKNGCPIVYVRPRLHHAADQTEAETSEYSLFIIEQARLFLKEPCDTATILFDLSGFSMA-NMDYAPVKFLITCFEAHYPECLGKLFIHKAPWIFPPIWNIIKNWLDPVVAAKIAFT-----KTAADLEEFIPAEQIPLELGGKDEYNFD 348          
BLAST of CV886900 vs. ExPASy Swiss-Prot
Match: YAS2_SCHPO (CRAL-TRIO domain-containing protein C3H8.02 OS=Schizosaccharomyces pombe GN=SPAC3H8.02 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.083e-15
Identity = 62/222 (27.93%), Postives = 97/222 (43.69%), Query Frame = -3
Query:  262 DACLKRYLEARNWNVDKAKKMLEETLKWRSTYRPEEIRWNEIAVEGE-------------TGKLFRAGFHDRHGRTVLILRPGMQNTASIDNQM--RHLVYLIENAILNLPEGQEQMAWLIDFTGWSLSTSVPIRSARETINILQNHYPERLAIAFLYNPPRIFEAFWKVVKYFLDAKTFQKVKFVYPKNKDSVEVMSSYFDEENLPTEFGGKATLHYDHEE 882
            D  L R+L AR WNV+ A +M  +T+ WRS     E+   EI    +              GK F  G  D+H R V  +R  +     +  +   R  V+++E A L L    E    + D T +S+S ++     +  I   + HYPE L    ++  P +F+  W ++K +LD     KVKF       +   +  Y + +N+  EFGG     Y + E
Sbjct:  124 DGLLLRFLRARKWNVEAALEMFMKTVHWRS----REMNVGEIVCNADHLDKDDDFVRQLRIGKCFIFG-EDKHNRPVCYIRARLHKVGDVSPESVERLTVWVMETARLILKPPIETATVVFDMTDFSMS-NMDYGPLKFMIKCFEAHYPECLGECIVHKAPWLFQGVWSIIKSWLDPVVVSKVKFT-----RNYRDLQQYINPDNILKEFGGPNPWRYTYPE 334          
BLAST of CV886900 vs. ExPASy Swiss-Prot
Match: RETM_DROPS (Protein real-time OS=Drosophila pseudoobscura pseudoobscura GN=retm PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.083e-15
Identity = 61/218 (27.98%), Postives = 105/218 (48.17%), Query Frame = -3
Query:  277 RYLEARNWNVDKAKKMLEETLKWRSTYRPEEI--RWNEIAVEGETGKLFRAGFH--DRHGRTVLILR------PGMQNTASIDNQMRHLVYLIENAILNLPEGQEQM-------AWLIDFTGWSLST--SVPIRSARETINILQNHYPERLAIAFLYNPPRIFEAFWKVVKYFLDAKTFQKVKFVYPKNKDSVEVMSSYFDEENLPTEFGG--KATLH 867
            R+L AR+W+V +A  ML ++L+WR  +R + +   + E AV  E    F  G+H  D+ GR + ILR       G+  +  ++  +R  +++ E  I  + E  E++       + L+D  G S+       I++    I  ++ +YPE +    +   PR+F   W +V  F+D  T  K  F  P  +   + ++ Y DEE +P   GG  K  +H
Sbjct:  247 RFLSARDWHVSQAFAMLCDSLQWRKEHRMDSLLEEYTEPAVVVEH---FPGGWHHHDKDGRPIYILRLGHMDVKGLLKSLGMEGLLRLALHICEEGIQKINESAERLDKPVLNWSLLVDLEGLSMRHLWRPGIKALLYIIETVERNYPETMGRVLVVRAPRVFPIAWTIVSAFIDEHTRSKFLFYGPDCEHMKDGLAQYIDEEIVPDFLGGPCKTMIH 461          
BLAST of CV886900 vs. ExPASy Swiss-Prot
Match: RETM_DROME (Protein real-time OS=Drosophila melanogaster GN=retm PE=1 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 1.083e-15
Identity = 63/218 (28.90%), Postives = 105/218 (48.17%), Query Frame = -3
Query:  277 RYLEARNWNVDKAKKMLEETLKWRSTYRPEEI--RWNEIAVEGETGKLFRAGFH--DRHGRTVLILR------PGMQNTASIDNQMRHLVYLIENAILNLPEGQEQMA-----W--LIDFTGWSLST--SVPIRSARETINILQNHYPERLAIAFLYNPPRIFEAFWKVVKYFLDAKTFQKVKFVYPKNKDSVEVMSSYFDEENLPTEFGG--KATLH 867
            R+L AR+W+V +A  ML ++L+WR  +R + +   +++ AV  E    F  G+H  D+ GR V ILR       G+  +  +D  +R  +++ E  I  + E  E++      W  L+D  G S+       I++    I  ++ +YPE +    +   PR+F   W +V  F+D  T  K  F  P      + ++ Y DEE +P   GG  K  +H
Sbjct:  249 RFLAARDWHVSQAYAMLCDSLRWRREHRIDALLAEYSKPAVVVEH---FPGGWHHLDKDGRPVYILRLGHMDVKGLLKSLGMDGLLRLALHICEEGIQKINESAERLEKPVLNWSLLVDLEGLSMRHLWRPGIKALLNIIETVERNYPETMGRVLVVRAPRVFPIAWTIVSAFIDEHTRSKFLFYGPDCAHMKDGLAQYLDEEIVPDFLGGPCKTMIH 463          
BLAST of CV886900 vs. ExPASy Swiss-Prot
Match: RETM_ANOGA (Protein real-time OS=Anopheles gambiae GN=retm PE=3 SV=4)

HSP 1 Score: 80.8777 bits (198), Expect = 1.198e-14
Identity = 57/216 (26.39%), Postives = 99/216 (45.83%), Query Frame = -3
Query:  280 LKRYLEARNWNVDKAKKMLEETLKWRSTYRPEEIRWNEIAVEGETGKLFRAGF--HDRHGRTVLILRPGMQNTASI------DNQMRHLVYLIENAILNLPE-----GQEQMAW--LIDFTGWSLS--TSVPIRSARETINILQNHYPERLAIAFLYNPPRIFEAFWKVVKYFLDAKTFQKVKFV-YPKNKDSVEVMSSYFDEENLPTEFGGKATL 873
            L R+L AR++++DKA  ML+E+L+WR   R + I   E        K F  G+  HD+ GR + ILR G  +   +      D  ++  +++ E  +  + E     G+    W  L+D  G S+       +++    I  ++ +YPE +    +   PR+F   W +V  F+D  T  K  F   P    + + +  Y D + +P+  GG   +
Sbjct:  258 LLRFLRARDFSIDKATGMLQESLQWRKEQRIDSI-LGEYKTPAVVEKYFPGGWHHHDKDGRPLYILRLGTMDVKGLLKSVGEDELLKLTLHICEEGLRLMKEATKLFGKPVWNWCLLVDLDGLSMRHLWRPGVKALLRIIETVETNYPETMGRVLIVRAPRVFPVLWTIVSTFIDENTRSKFLFFGGPDCMHAEDGIEQYIDTDKIPSFLGGSCNV 472          
BLAST of CV886900 vs. ExPASy Swiss-Prot
Match: RETM_AEDAE (Protein real-time OS=Aedes aegypti GN=retm PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.551e-14
Identity = 56/214 (26.17%), Postives = 102/214 (47.66%), Query Frame = -3
Query:  292 LKRYLEARNWNVDKAKKMLEETLKWRSTYRPEEIRWNEIAVEGETGKLFRAGF--HDRHGRTVLILR------PGMQNTASIDNQMRHLVYLIENAILNLPE-----GQEQMAW--LIDFTGWSLS--TSVPIRSARETINILQNHYPERLAIAFLYNPPRIFEAFWKVVKYFLDAKTFQKVKFVYPKNKDSVEV---MSSYFDEENLPTEFGG 873
            L R+L AR+++++KA  ML+E+L+WR  +R ++I   E        K F  G+  HD+ GR + ILR       G+  +   D  ++  +++ E  +  + E     G+    W  L+D  G S+       +++    I  ++ +YPE +    +   PR+F   W +V  F+D  T  + KF++    D + +   +  Y   E +P+  GG
Sbjct:  255 LLRFLRARDFSIEKAASMLQESLQWREEHRIDDI-LGEYKTPVVVEKYFPGGWHHHDKDGRPLYILRLGNMDVKGLLKSVGEDELLKLTLHICEEGLKLMKEATKLFGKPIWNWCLLVDLDGLSMRHLWRPGVKALLRIIETVEKNYPETMGRVLIVRAPRVFPVLWTIVSAFIDENT--RSKFLFFGGPDCLHIEDGLEHYIPTEKIPSFLGG 465          
The following BLAST results are available for this feature:
BLAST of CV886900 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
YJX4_SCHPO1.009e-2935.85CRAL-TRIO domain-containing protein C23B6.04c OS=S... [more]
RSC5_DICDI1.234e-2729.83Random slug protein 5 OS=Dictyostelium discoideum ... [more]
PDR16_YEAST1.667e-2430.83Phosphatidylinositol transfer protein PDR16 OS=Sac... [more]
PDR17_YEAST1.081e-2333.62Phosphatidylinositol transfer protein PDR17 OS=Sac... [more]
CSR1_ASHGO6.351e-1627.06Phosphatidylinositol transfer protein CSR1 OS=Ashb... [more]
YAS2_SCHPO1.083e-1527.93CRAL-TRIO domain-containing protein C3H8.02 OS=Sch... [more]
RETM_DROPS1.083e-1527.98Protein real-time OS=Drosophila pseudoobscura pseu... [more]
RETM_DROME1.083e-1528.90Protein real-time OS=Drosophila melanogaster GN=re... [more]
RETM_ANOGA1.198e-1426.39Protein real-time OS=Anopheles gambiae GN=retm PE=... [more]
RETM_AEDAE4.551e-1426.17Protein real-time OS=Aedes aegypti GN=retm PE=3 SV... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_025H06_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_025_T7_H06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV886900 ID=CV886900; Name=CV886900; organism=Citrus sinensis; type=EST; length=947bp
TTTTTTTTTTTTTTTTTGAATAAATATTTTCCTTCGCACAGTAACTATAG
CCCATCGGGAGCATCCGAAGATGATAAATTGATAATGTTGCTAAAATTTT
GATTTCCCTATCATTTATTACAATGATACCAGAGCAGCTCAACTGGCTGG
CTCTGGAGCCACTTCAGCTCCAGAATGCCCATTACCAACGCGTTGCAGTT
TGTCATCAAATCCCCACAATGTTGCTGATTTTGAATCATCTTGAATCATT
AATTTGGAAAACTCTTCATGGTCATAATGCAATGTGGCCTTTCCTCCAAA
CTCAGTCGGAAGATTTTCCTCATCAAAATATGAACTCATGACTTCCACGC
TGTCTTTATTCTTTGGATATACAAATTTCACCTTTTGGAATGTTTTGGCA
TCCAAGAAATACTTGACAACCTTCCAAAATGCTTCAAAAATCCGTGGGGG
ATTGTAGAGAAATGCTATGGCCAGCCTTTCAGGGTAGTGATTTTGTAATA
TATTGATAGTTTCTCGGGCAGACCTGATGGGGACGCTGGTGCTCAATGAC
CACCCAGTGAAGTCTATTAACCATGCCATTTGTTCCTGACCCTCTGGAAG
GTTTAGGATAGCATTCTCTATGAGATAGACTAGGTGTCTCATCTGATTGT
CTATTGATGCAGTGTTCTGCATTCCGGGTCTCAATATGAGAACAGTCCTG
CCATGTCGGTCATGAAAACCAGCTCTAAATAACTTTCCGGTCTCACCTTC
AACTGCAATTTCATTCCAACGGATTTCCTCCGGCCTGTAGGTTGACCTCC
ATTTGAGTGTCTCTTCCAACATTTTCTTTGCTTTGTCCACATTCCAGTTT
CGAGCCTCCAGATATCTCTTCAAGCATGCATCAGAGCAGTACTGCAAACT
ACGTCCATAAAGTGGTCCAATTGCAGCCTTAACCTCCTTGACCTTTG
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