EY665632

Overview
NameEY665632
Unique NameEY665632
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length815
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5003 contig Csv1_Contig5003:12..767. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY665632 vs. ExPASy Swiss-Prot
Match: YB95_ARATH (Uncharacterized protein At2g39795, mitochondrial OS=Arabidopsis thaliana GN=At2g39795 PE=1 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 4.831e-51
Identity = 116/226 (51.33%), Postives = 153/226 (67.70%), Query Frame = 2
Query:  113 SAIFTASQTLYQKPNLGPFAPN-LYFSTATETTKPRSDDSLLRIIDSEIKCAVETDDHDRDEE-TPGGFPFKIEDNPGLQTITLTREYEGELDKVEVQMPDLVSGEQPEAVDDDNDMETPNQSSIPLVVTVSKSSGTSLEFNCVAYPDEISIDSLAVRKT-ENLEDEAGYEGPDFHDLDENLKKAFHKNLEIRGIKPSPKIFLFE*LLNKRRPQIFELG*KNLKEF 781
            SA+   +       ++ PF    L +STA +     S+ +L+R+IDSEI  A+++D+ D DEE TPG FPF+IED PG Q +TLTR+Y GE  KV V MP LVS E  +  DDD+D    N+SSIPLVVTV+K SG +LEF+C+A+PDEI+ID+L+V+   ++LED+   EGPDF DLDENLKK F+K LEIRG+K S   FL E +  K   + F L  KN+KEF
Sbjct:   27 SAVANRASLARNPSSIRPFVSRALNYSTAIDRIS--SEQTLIRVIDSEINSALQSDNIDSDEEMTPGSFPFRIEDKPGNQNVTLTRDYNGEHIKVVVSMPSLVSDENDD--DDDDDEGPSNESSIPLVVTVTKKSGLTLEFSCMAFPDEIAIDALSVKHPGDSLEDQLANEGPDFEDLDENLKKTFYKFLEIRGVKASTTNFLHEYMTRKVNREYF-LWLKNVKEF 247          
BLAST of EY665632 vs. ExPASy Swiss-Prot
Match: Y2979_ARATH (Uncharacterized protein At2g39790, mitochondrial OS=Arabidopsis thaliana GN=At2g39790 PE=2 SV=2)

HSP 1 Score: 113.62 bits (283), Expect = 1.325e-24
Identity = 77/193 (39.90%), Postives = 100/193 (51.81%), Query Frame = 2
Query:  113 SAIFTASQTLYQKPNLGPFAPNLYFSTATETTKPRSDDSLLRIIDSEIKCAVETDDHDRDEE-TPGGFPFKIEDNPGLQTITLTREYEGELDKVEVQMPDLVSGEQPEAVDDDNDMETPN--QSSIPLVVTVSKSSGTSLEFNCVAYPDEISIDSLAVRKTENLEDEAGYEGPDFHDLDENLKKAFHKNLEIR 682
            SA+            L PF    +  T     K  S+ +L  +IDSE+  A++TDD + +EE  PG FP KI D PG Q++TLT  Y  E   V+V MP L         DD  D+  PN  + S PLVVTV K +G S+EF C AY D I +  L V   +    E  +  P F +LD+NLKKAFH+ L  R
Sbjct:   25 SAVVNRPSLALNPSPLSPFVSRGFLYTMA-VDKLSSEQTLHLVIDSELNSALQTDDPNLNEEMAPGSFPLKIRDKPGDQSVTLTAYYNDERIHVDVGMPYL--------GDDVIDVFGPNNDELSFPLVVTVIKKNGVSIEFTCQAYADYIDLTDLTVHDYQYQMGETDW--PRFKNLDDNLKKAFHRYLATR 206          
The following BLAST results are available for this feature:
BLAST of EY665632 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
YB95_ARATH4.831e-5151.33Uncharacterized protein At2g39795, mitochondrial O... [more]
Y2979_ARATH1.325e-2439.90Uncharacterized protein At2g39790, mitochondrial O... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-102-070-G10-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665632 ID=EY665632; Name=EY665632; organism=Citrus sinensis; type=EST; length=815bp
CTTATATTTTCTCCATCCCCCTTATATGGTTTTCAGTTCAATTCTTCGGA
AATCGGCCTCCTCTTTGGCCCCACTCGCTAGTCGACTTACCCGAGTCAAC
AGAAATTACCACTCTGCCATCTTCACCGCTTCACAAACTCTCTATCAGAA
GCCAAATTTGGGCCCTTTTGCACCGAATCTTTACTTCTCTACGGCTACTG
AGACTACGAAGCCGAGGTCTGATGACTCACTTCTCCGAATCATTGACTCC
GAAATCAAGTGTGCCGTGGAAACTGATGATCATGACCGGGATGAAGAGAC
TCCTGGTGGCTTTCCTTTCAAAATTGAAGACAATCCCGGACTGCAGACCA
TAACACTGACTAGAGAATATGAGGGTGAACTTGATAAAGTGGAGGTTCAG
ATGCCTGATCTTGTTAGTGGTGAACAACCCGAGGCTGTTGATGACGACAA
TGATATGGAAACGCCCAATCAATCTAGCATCCCGCTGGTTGTTACTGTCT
CTAAGAGTAGTGGAACCTCACTCGAGTTTAATTGTGTTGCTTATCCCGAC
GAGATTTCAATTGATAGCTTGGCTGTAAGAAAGACAGAAAATTTGGAGGA
TGAAGCTGGCTATGAGGGGCCTGACTTCCATGATTTGGATGAGAACCTGA
AAAAAGCTTTCCACAAGAACTTGGAAATTCGAGGAATAAAGCCTAGCCCA
AAAATTTTTTTGTTTGAGTAATTGCTGAACAAAAGAAGGCCACAAATATT
TGAATTGGGTTGAAAAAACTTAAAGGAATTTCGTTGGGGGTTAAATTTTC
TGGAAGGGAAGAAGC
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