CV886887

Overview
NameCV886887
Unique NameCV886887
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length890
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV886887 vs. ExPASy Swiss-Prot
Match: RL15_PETHY (60S ribosomal protein L15 OS=Petunia hybrida GN=RPL15 PE=2 SV=1)

HSP 1 Score: 347.436 bits (890), Expect = 6.263e-95
Identity = 172/204 (84.31%), Postives = 176/204 (86.27%), Query Frame = -3
Query:  277 MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRNDPRINWICKPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATWKRNQTLSLRRYR 888
            MGAY YVSELWRKKQSDVMRFLQRVRCWEYRQ PSIVRVTRPTRPDKARRLGYKAKQ                    GIVYGKPTNQGVTQLKFQR+KRSVAEERAGRKLGGL+VLNSYWINEDSTYKYFEVILVD AH AIRNDPRINWIC PVHKHRELRGLTSAGKKYRGLRG+GHLH+KA PSRRA WKRNQTLSL RYR
Sbjct:    1 MGAYTYVSELWRKKQSDVMRFLQRVRCWEYRQLPSIVRVTRPTRPDKARRLGYKAKQGYVVYRVRVKRGGRKRPVPKGIVYGKPTNQGVTQLKFQRTKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDQAHAAIRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGRGHLHNKAPPSRRANWKRNQTLSLPRYR 204          
BLAST of CV886887 vs. ExPASy Swiss-Prot
Match: RL151_ARATH (60S ribosomal protein L15-1 OS=Arabidopsis thaliana GN=RPL15A PE=2 SV=1)

HSP 1 Score: 341.658 bits (875), Expect = 3.437e-93
Identity = 165/204 (80.88%), Postives = 175/204 (85.78%), Query Frame = -3
Query:  277 MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRNDPRINWICKPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATWKRNQTLSLRRYR 888
            MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQ PSIVR+ RPTRPDKARRLGYKAKQ                    GIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGL+V+NSYW+NEDSTYKY+E+ILVD AHNA+RNDPRINWIC PVHKHRELRGLTS GKK RGLRGKGH +HK RPSRRATWK+N +LSLRRYR
Sbjct:    1 MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQQPSIVRLVRPTRPDKARRLGYKAKQGFVVYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVVNSYWLNEDSTYKYYEIILVDPAHNAVRNDPRINWICNPVHKHRELRGLTSEGKKNRGLRGKGHNNHKNRPSRRATWKKNNSLSLRRYR 204          
BLAST of CV886887 vs. ExPASy Swiss-Prot
Match: RL152_ARATH (60S ribosomal protein L15-2 OS=Arabidopsis thaliana GN=RPL15B PE=2 SV=1)

HSP 1 Score: 340.887 bits (873), Expect = 5.862e-93
Identity = 164/204 (80.39%), Postives = 175/204 (85.78%), Query Frame = -3
Query:  277 MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRNDPRINWICKPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATWKRNQTLSLRRYR 888
            MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQ PSIVR+ RPTRPDKARRLGYKAKQ                    GIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGL+V+NSYW+NEDSTYKY+E+ILVD AHNA+RNDPRINWIC PVHKHRELRGLTS GKK RGLRGKGH +HK RPSRRATWK+N ++SLRRYR
Sbjct:    1 MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQQPSIVRLVRPTRPDKARRLGYKAKQGFVVYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVVNSYWLNEDSTYKYYEIILVDPAHNAVRNDPRINWICNPVHKHRELRGLTSEGKKNRGLRGKGHNNHKNRPSRRATWKKNNSISLRRYR 204          
BLAST of CV886887 vs. ExPASy Swiss-Prot
Match: RL15B_PICMA (60S ribosomal protein L15-2 OS=Picea mariana GN=SB62 PE=2 SV=1)

HSP 1 Score: 336.65 bits (862), Expect = 1.106e-91
Identity = 161/204 (78.92%), Postives = 172/204 (84.31%), Query Frame = -3
Query:  277 MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRNDPRINWICKPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATWKRNQTLSLRRYR 888
            MGAYKY+ ELW+KKQSDVMRFLQRVRCWEYRQ P IVR+T PTRPDKARRLGYKAKQ                    GIVYGKP NQG+TQLKFQRS RSVAEERAGRKLGGL+VLNSYWIN+DSTYKY+EV+LVD AH  IRNDPRINWIC  VHKHRELRGLTSAGKKYRGLRG+GHL+HKARPS+RATWKRN TLSLRRYR
Sbjct:    1 MGAYKYIEELWKKKQSDVMRFLQRVRCWEYRQLPGIVRITHPTRPDKARRLGYKAKQGYVVYRVRVRRGGRKRPVPKGIVYGKPKNQGITQLKFQRSLRSVAEERAGRKLGGLRVLNSYWINQDSTYKYYEVVLVDQAHTVIRNDPRINWICNAVHKHRELRGLTSAGKKYRGLRGRGHLYHKARPSKRATWKRNNTLSLRRYR 204          
BLAST of CV886887 vs. ExPASy Swiss-Prot
Match: RL15A_PICMA (60S ribosomal protein L15-1 OS=Picea mariana GN=SB61 PE=2 SV=1)

HSP 1 Score: 335.495 bits (859), Expect = 2.463e-91
Identity = 161/204 (78.92%), Postives = 174/204 (85.29%), Query Frame = -3
Query:  277 MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRNDPRINWICKPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATWKRNQTLSLRRYR 888
            MGAYKY+ ELW+KKQSDVMRFLQRVRCWE+RQ P IVRVTRP+RPDKARRLGYKAKQ                    GIVYGKP NQG+TQLKFQRS RSVAEERAGRKLGGL+VLNSYWIN+DSTYKY+E+ILVD AH+AIR DPRINWIC  VHKHRELRGLTSAGKKYRGLRG+GHL+HKARPS+RATWKRN TLSLRRYR
Sbjct:    1 MGAYKYIEELWKKKQSDVMRFLQRVRCWEFRQLPGIVRVTRPSRPDKARRLGYKAKQGYVVYRVRVRRGGRKRPVPKGIVYGKPKNQGITQLKFQRSLRSVAEERAGRKLGGLRVLNSYWINQDSTYKYYEIILVDQAHSAIRKDPRINWICNAVHKHRELRGLTSAGKKYRGLRGRGHLYHKARPSKRATWKRNNTLSLRRYR 204          
BLAST of CV886887 vs. ExPASy Swiss-Prot
Match: RL15_RAT (60S ribosomal protein L15 OS=Rattus norvegicus GN=Rpl15 PE=1 SV=2)

HSP 1 Score: 261.922 bits (668), Expect = 3.461e-69
Identity = 132/205 (64.39%), Postives = 146/205 (71.22%), Query Frame = -3
Query:  277 MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRNDPRINWICKPVHKHRELRGLTSAGKKYRGLRGKGH-LHHKARPSRRATWKRNQTLSLRRYR 888
            MGAYKY+ ELWRKKQSDVMRFL RVRCW+YRQ  ++ R  RPTRPDKARRLGYKAKQ                    G  YGKP + GV QLKF RS +SVAEERAGR  G L+VLNSYW+ EDSTYK+FEVIL+D  H AIR +P   WI KPVHKHRE+RGLTSAG+K RGL GKGH  HH    SRRA W+R  TL L RYR
Sbjct:    1 MGAYKYIQELWRKKQSDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYWVGEDSTYKFFEVILIDPFHKAIRRNPDTQWITKPVHKHREMRGLTSAGRKSRGL-GKGHKFHHTIGGSRRAAWRRRNTLQLHRYR 204          
BLAST of CV886887 vs. ExPASy Swiss-Prot
Match: RL15_PONAB (60S ribosomal protein L15 OS=Pongo abelii GN=RPL15 PE=2 SV=3)

HSP 1 Score: 261.922 bits (668), Expect = 3.461e-69
Identity = 132/205 (64.39%), Postives = 146/205 (71.22%), Query Frame = -3
Query:  277 MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRNDPRINWICKPVHKHRELRGLTSAGKKYRGLRGKGH-LHHKARPSRRATWKRNQTLSLRRYR 888
            MGAYKY+ ELWRKKQSDVMRFL RVRCW+YRQ  ++ R  RPTRPDKARRLGYKAKQ                    G  YGKP + GV QLKF RS +SVAEERAGR  G L+VLNSYW+ EDSTYK+FEVIL+D  H AIR +P   WI KPVHKHRE+RGLTSAG+K RGL GKGH  HH    SRRA W+R  TL L RYR
Sbjct:    1 MGAYKYIQELWRKKQSDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYWVGEDSTYKFFEVILIDPFHKAIRRNPDTQWITKPVHKHREMRGLTSAGRKSRGL-GKGHKFHHTIGGSRRAAWRRRNTLQLHRYR 204          
BLAST of CV886887 vs. ExPASy Swiss-Prot
Match: RL15_MOUSE (60S ribosomal protein L15 OS=Mus musculus GN=Rpl15 PE=2 SV=4)

HSP 1 Score: 261.922 bits (668), Expect = 3.461e-69
Identity = 132/205 (64.39%), Postives = 146/205 (71.22%), Query Frame = -3
Query:  277 MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRNDPRINWICKPVHKHRELRGLTSAGKKYRGLRGKGH-LHHKARPSRRATWKRNQTLSLRRYR 888
            MGAYKY+ ELWRKKQSDVMRFL RVRCW+YRQ  ++ R  RPTRPDKARRLGYKAKQ                    G  YGKP + GV QLKF RS +SVAEERAGR  G L+VLNSYW+ EDSTYK+FEVIL+D  H AIR +P   WI KPVHKHRE+RGLTSAG+K RGL GKGH  HH    SRRA W+R  TL L RYR
Sbjct:    1 MGAYKYIQELWRKKQSDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYWVGEDSTYKFFEVILIDPFHKAIRRNPDTQWITKPVHKHREMRGLTSAGRKSRGL-GKGHKFHHTIGGSRRAAWRRRNTLQLHRYR 204          
BLAST of CV886887 vs. ExPASy Swiss-Prot
Match: RL15_MACFA (60S ribosomal protein L15 OS=Macaca fascicularis GN=RPL15 PE=2 SV=1)

HSP 1 Score: 261.922 bits (668), Expect = 3.461e-69
Identity = 132/205 (64.39%), Postives = 146/205 (71.22%), Query Frame = -3
Query:  277 MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRNDPRINWICKPVHKHRELRGLTSAGKKYRGLRGKGH-LHHKARPSRRATWKRNQTLSLRRYR 888
            MGAYKY+ ELWRKKQSDVMRFL RVRCW+YRQ  ++ R  RPTRPDKARRLGYKAKQ                    G  YGKP + GV QLKF RS +SVAEERAGR  G L+VLNSYW+ EDSTYK+FEVIL+D  H AIR +P   WI KPVHKHRE+RGLTSAG+K RGL GKGH  HH    SRRA W+R  TL L RYR
Sbjct:    1 MGAYKYIQELWRKKQSDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYWVGEDSTYKFFEVILIDPFHKAIRRNPDTQWITKPVHKHREMRGLTSAGRKSRGL-GKGHKFHHTIGGSRRAAWRRRNTLQLHRYR 204          
BLAST of CV886887 vs. ExPASy Swiss-Prot
Match: RL15_HUMAN (60S ribosomal protein L15 OS=Homo sapiens GN=RPL15 PE=1 SV=2)

HSP 1 Score: 261.922 bits (668), Expect = 3.461e-69
Identity = 132/205 (64.39%), Postives = 146/205 (71.22%), Query Frame = -3
Query:  277 MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRNDPRINWICKPVHKHRELRGLTSAGKKYRGLRGKGH-LHHKARPSRRATWKRNQTLSLRRYR 888
            MGAYKY+ ELWRKKQSDVMRFL RVRCW+YRQ  ++ R  RPTRPDKARRLGYKAKQ                    G  YGKP + GV QLKF RS +SVAEERAGR  G L+VLNSYW+ EDSTYK+FEVIL+D  H AIR +P   WI KPVHKHRE+RGLTSAG+K RGL GKGH  HH    SRRA W+R  TL L RYR
Sbjct:    1 MGAYKYIQELWRKKQSDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYWVGEDSTYKFFEVILIDPFHKAIRRNPDTQWITKPVHKHREMRGLTSAGRKSRGL-GKGHKFHHTIGGSRRAAWRRRNTLQLHRYR 204          
The following BLAST results are available for this feature:
BLAST of CV886887 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 93
Match NameE-valueIdentityDescription
RL15_PETHY6.263e-9584.3160S ribosomal protein L15 OS=Petunia hybrida GN=RP... [more]
RL151_ARATH3.437e-9380.8860S ribosomal protein L15-1 OS=Arabidopsis thalian... [more]
RL152_ARATH5.862e-9380.3960S ribosomal protein L15-2 OS=Arabidopsis thalian... [more]
RL15B_PICMA1.106e-9178.9260S ribosomal protein L15-2 OS=Picea mariana GN=SB... [more]
RL15A_PICMA2.463e-9178.9260S ribosomal protein L15-1 OS=Picea mariana GN=SB... [more]
RL15_RAT3.461e-6964.3960S ribosomal protein L15 OS=Rattus norvegicus GN=... [more]
RL15_PONAB3.461e-6964.3960S ribosomal protein L15 OS=Pongo abelii GN=RPL15... [more]
RL15_MOUSE3.461e-6964.3960S ribosomal protein L15 OS=Mus musculus GN=Rpl15... [more]
RL15_MACFA3.461e-6964.3960S ribosomal protein L15 OS=Macaca fascicularis G... [more]
RL15_HUMAN3.461e-6964.3960S ribosomal protein L15 OS=Homo sapiens GN=RPL15... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_025G11_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_025_T7_G11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV886887 ID=CV886887; Name=CV886887; organism=Citrus sinensis; type=EST; length=890bp
TCTCTTTCATATCACTAGTAAAACAGAAAGGCAGAAACATCACTCCCCTA
CTATGAAGAAGAATAGACGGACACGGAATGAATCCCACAAATATAGAAGG
TATTCATCGGATAAAACAATCCATAGGAATTACAATATTCAATTGCCCAA
ATGAAACAAAATTAACCATGATGCAGCAAAAACTAACCCAAAACACTTGT
TTCGGAGTTCAAACTCAACAGCAATTAAACTAGGTTGATAATGTGAAAAA
CACAAAGTAAACAATACAGAAGTTTAACGGTAACGCCTGAGCGAGAGAGT
TTGGTTCCTCTTCCAGGTTGCCCTTCTTGAAGGTCGTGCCTTGTGGTGCA
AGTGACCCTTTCCTCGGAGACCTCTGTACTTCTTCCCAGCAGAAGTGAGT
CCACGAAGCTCCCTGTGCTTGTGGACAGGCTTACAGATCCAGTTGATCCT
GGGGTCATTGCGGATTGCATTGTGGGCAGCATCCACCAGGATTACCTCAA
AGTACTTGTAAGTTGAATCCTCATTGATCCAGTATGAGTTGAGAACCTTA
AGGCCACCAAGCTTACGACCGGCACGTTCCTCAGCAACTGAACGCTTGCT
GCGCTGGAATTTAAGCTGAGTGACACCCTGGTTTGTCGGTTTACCATATA
CAATACCCTTGGGAACTGGTCTCTTTCGTCCTCCACGTCTTACACGCACA
CGATAAACGACATAACCCTGCTTGGCCTTGTAGCCCAAGCGGCGAGCCTT
GTCGGGGCGAGTGGGACGGGTGACGCGGACGATGGAAGGGTGCTGACGGT
ACTCCCAGCACCTCACCCTCTGCAAGAACCTCATCACATCCGACTGCTTC
TTCCTCCATAGCTCCGACACGTACTTGTATGCACCCATTG
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