EY665630

Overview
NameEY665630
Unique NameEY665630
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length730
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY665630_ssr81 microsatellite EY665630_ssr81:81..95. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig9426 contig Csv1_Contig9426:71..800. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY665630 vs. ExPASy Swiss-Prot
Match: YHI2_MYCTU (Uncharacterized HIT-like protein Rv1262c/MT1300 OS=Mycobacterium tuberculosis GN=Rv1262c PE=4 SV=2)

HSP 1 Score: 100.523 bits (249), Expect = 9.638e-21
Identity = 51/120 (42.50%), Postives = 73/120 (60.83%), Query Frame = 2
Query:  170 CVFCKIIRGESPAVKLYEDDTCLCILDTNPLSLGHSLIVPKSHFSCLDATPPSVVAAMCAKVPLISNAIMKATDADSFNLLVNNGAAAGQVIFHTHIHIIPRKAHDCLWTSES--LRRRP 523
            CVFC II GE+PA+++YED   L ILD  P + GH+L++PK H   L  TPP  +A M A    I+ A      AD+ ++ +N+G AA Q +FH H+H++P +  D L  ++   LRR P
Sbjct:    3 CVFCAIIAGEAPAIRIYEDGGYLAILDIRPFTRGHTLVLPKRHTVDLTDTPPEALADMVAIGQRIARAARATKLADATHIAINDGRAAFQTVFHVHLHVLPPRNGDKLSVAKGMMLRRDP 122          
BLAST of EY665630 vs. ExPASy Swiss-Prot
Match: YHIT_BORBU (Uncharacterized HIT-like protein BB_0379 OS=Borrelia burgdorferi GN=BB_0379 PE=4 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 9.021e-19
Identity = 50/112 (44.64%), Postives = 66/112 (58.93%), Query Frame = 2
Query:  167 DCVFCKIIRGESPAVKLYEDDTCLCILDTNPLSLGHSLIVPKSHFSCL---DATPPSVVAAMCAKVPLISNAIMKATDA--DSFNLLVNNGAAAGQVIFHTHIHIIPRKAHD 487
            DC+FCKII  E P+ K+YEDD  L  LD NPL++GH+L++PK H   L   D      V  +C K   ISNA+ +   +     N+    GA AGQ +FHTH H+IPR  +D
Sbjct:    3 DCIFCKIINKELPSYKVYEDDLVLAFLDINPLTVGHTLVIPKEHSESLLNMDDKFNERVLKVCKK---ISNALKRINSSIYGGINIYSALGAGAGQEVFHTHFHVIPRFKND 111          
BLAST of EY665630 vs. ExPASy Swiss-Prot
Match: Y866_METJA (Uncharacterized HIT-like protein MJ0866 OS=Methanocaldococcus jannaschii GN=MJ0866 PE=4 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 3.428e-18
Identity = 45/106 (42.45%), Postives = 60/106 (56.60%), Query Frame = 2
Query:  170 CVFCKIIRGESPAVKLYEDDTCLCILDTNPLSLGHSLIVPKSHFSCLDATPPSVVAAMCAKVPLISNAIMKATDADSFNLLVNNGAAAGQVIFHTHIHIIPRKAHD 487
            C+FCKII GE PA  +YED+  L  LD NP + GH+L+VPK H+   D  P   +      V   +  ++K    D +N++ NNG  AGQ + H H HIIPR   D
Sbjct:    2 CIFCKIINGEIPAKVVYEDEHVLAFLDINPRNKGHTLVVPKKHYERFDEMPDDELCNFIKGVKK-TVEVLKKLGFDGYNIVNNNGRVAGQEVNHVHFHIIPRYEGD 106          
BLAST of EY665630 vs. ExPASy Swiss-Prot
Match: YHIT_SULSO (Uncharacterized HIT-like protein SSO2163 OS=Sulfolobus solfataricus GN=SSO2163 PE=4 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 7.637e-18
Identity = 40/106 (37.74%), Postives = 61/106 (57.55%), Query Frame = 2
Query:  170 CVFCKIIRGESPAVKLYEDDTCLCILDTNPLSLGHSLIVPKSHFSCLDATPPSVVAAMCAKVPLISNAIMKATDADSFNLLVNNGAAAGQVIFHTHIHIIPRKAHD 487
            C+FC I+ G      +Y +D  +  LD  P++ GH+L+VP++H+         V+  +C  V  IS A+ KA  AD   +L N G +AGQV+FH+H HI+P  + D
Sbjct:    2 CIFCNIVEGRDHGYIVYSNDRVVAFLDKFPITPGHTLVVPRTHYENFLEISEDVIPYLCTAVRKISIAVKKALKADGIRILTNIGKSAGQVVFHSHFHIVPTWSQD 107          
BLAST of EY665630 vs. ExPASy Swiss-Prot
Match: HIT_BACSU (Protein hit OS=Bacillus subtilis GN=hit PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 7.637e-18
Identity = 46/137 (33.58%), Postives = 74/137 (54.01%), Query Frame = 2
Query:  167 DCVFCKIIRGESPAVKLYEDDTCLCILDTNPLSLGHSLIVPKSHFSCLDATPPSVVAAMCAKVPLISNAIMKATDADSFNLLVNNGAAAGQVIFHTHIHIIPR----KAHDCLWTSESLRRRPLKIDQETSQLADQV 565
            +C+FCKII G+ P+ K+YED+  L  LD + ++ GH+L++PK+H   +      +       VP I+ AI    +    N L NNG  AGQ +FH H+HIIPR         +W + +   +P  +   +S +A ++
Sbjct:    6 NCIFCKIIAGDIPSAKVYEDEHVLAFLDISQVTKGHTLVIPKTHIENVYEFTDELAKQYFHAVPKIARAIRDEFEPIGLNTLNNNGEKAGQSVFHYHMHIIPRYGKGDGFGAVWKTHADDYKPEDLQNISSSIAKRL 142          
BLAST of EY665630 vs. ExPASy Swiss-Prot
Match: YHIT_AQUAE (Uncharacterized HIT-like protein aq_141 OS=Aquifex aeolicus GN=aq_141 PE=4 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.633e-15
Identity = 44/109 (40.37%), Postives = 60/109 (55.05%), Query Frame = 2
Query:  161 ENDCVFCKIIRGESPAVKLYEDDTCLCILDTNPLSLGHSLIVPKSHFSCLDATPPS---VVAAMCAKVPLISNAIMKATDAD---SFNLLVNNGAAAGQVIFHTHIHII 469
            E DC+FCKI+RGE PA K+YEDD  L   D NP++  H LI+PK H   +    P    +V  M      I+  +  A D +    + L+ N G  AGQ +FH H+H+I
Sbjct:    3 EKDCIFCKIVRGEVPAKKVYEDDKVLAFHDINPVAPVHILIIPKKHIMGIQTLEPEDECLVGHMFYVARKIAEDLGIAPDENLNKGYRLVFNVGKDAGQSVFHLHLHLI 111          
BLAST of EY665630 vs. ExPASy Swiss-Prot
Match: HNT1_SCHPO (Hit family protein 1 OS=Schizosaccharomyces pombe GN=hnt1 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.633e-15
Identity = 40/102 (39.22%), Postives = 57/102 (55.88%), Query Frame = 2
Query:  170 CVFCKIIRGESPAVKLYEDDTCLCILDTNPLSLGHSLIVPKSHFSCLDATPPSVVAAMCAKVPLISNAIMKATDADSFNLLVNNGAAAGQVIFHTHIHIIPR 475
            C+FCKI++G+ P VKL E    L  LD  P S GH+L++PK H     A    +    CA +  +   + KA   +++N+L NNG  A Q + H H HIIP+
Sbjct:    3 CIFCKIVKGDIPCVKLAETALSLAFLDIAPTSKGHALVIPKEH----AAKMHELSDESCADILPLVKKVTKAIGPENYNVLQNNGRIAHQFVDHVHFHIIPK 100          
BLAST of EY665630 vs. ExPASy Swiss-Prot
Match: YHIT_SYNY3 (Uncharacterized HIT-like protein slr1234 OS=Synechocystis sp. (strain PCC 6803) GN=slr1234 PE=4 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.348e-14
Identity = 43/108 (39.81%), Postives = 58/108 (53.70%), Query Frame = 2
Query:  167 DCVFCKIIRGESPAVKLYEDDTCLCILDTNPLSLGHSLIVPKSHFSCLDATPPSVVAAMCAKVPLISNAIMKATD-------ADSFNLLVNNGAAAGQVIFHTHIHII 469
            D +F KIIR E PA  +YEDD CL   D NP +  H L++PK     L A  P   A       L+ + ++KA +        D F L++NNGA  GQ +FH H+HI+
Sbjct:    4 DTIFSKIIRREIPAAIVYEDDLCLAFKDVNPQAPVHVLLIPKKPLPQLSAATPEDHA-------LLGHLLLKAKEVAADLGIGDQFRLVINNGAEVGQTVFHLHLHIL 104          
BLAST of EY665630 vs. ExPASy Swiss-Prot
Match: HITA_NEIGO (Protein hitA OS=Neisseria gonorrhoeae GN=hitA PE=4 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.348e-14
Identity = 42/105 (40.00%), Postives = 57/105 (54.29%), Query Frame = 2
Query:  164 NDCVFCKIIRGESPAVKLYEDDTCLCILDTNPLSLGHSLIVPKSHFSCLDATPPS---VVAAMCAKVPLISNAIMKATDADSFNLLVNNGAAAGQVIFHTHIHII 469
            ++C+FCKI   E PA  +YED   +C  D NP +  H L++PK HF  L    P    ++  M  KVP I+ A   +   D F  L+N G   GQ +FH HIHI+
Sbjct:    2 DNCIFCKIAAKEIPAQTVYEDGEMVCFKDINPAAPLHLLLIPKVHFDSLAHAAPEHQPLLGKMMLKVPEIAKA---SGLTDGFKTLINTGKGGGQEVFHLHIHIM 103          
BLAST of EY665630 vs. ExPASy Swiss-Prot
Match: HNT1_YEAST (Hit family protein 1 OS=Saccharomyces cerevisiae GN=HNT1 PE=1 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 8.737e-14
Identity = 39/103 (37.86%), Postives = 56/103 (54.37%), Query Frame = 2
Query:  170 CVFCKIIRGESPAVKLYEDDTCLCILDTNPLSLGHSLIVPKSHFSCLDATPPSVVAAMCAKVPLISNAIMKATDADSFNLLVNNGAAAGQVIFHTHIHIIPRK 478
            C+FCKII+ E P+ KL E       LD  P + GH+LI+PK H + L   P   +         I+  + KA   D++N+L NNG  A Q + H H H+IP++
Sbjct:   25 CIFCKIIKSEIPSFKLIETKYSYAFLDIQPTAEGHALIIPKYHGAKLHDIPDEFLTDAMP----IAKRLAKAMKLDTYNVLQNNGKIAHQEVDHVHFHLIPKR 123          
The following BLAST results are available for this feature:
BLAST of EY665630 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
YHI2_MYCTU9.638e-2142.50Uncharacterized HIT-like protein Rv1262c/MT1300 OS... [more]
YHIT_BORBU9.021e-1944.64Uncharacterized HIT-like protein BB_0379 OS=Borrel... [more]
Y866_METJA3.428e-1842.45Uncharacterized HIT-like protein MJ0866 OS=Methano... [more]
YHIT_SULSO7.637e-1837.74Uncharacterized HIT-like protein SSO2163 OS=Sulfol... [more]
HIT_BACSU7.637e-1833.58Protein hit OS=Bacillus subtilis GN=hit PE=1 SV=1[more]
YHIT_AQUAE4.633e-1540.37Uncharacterized HIT-like protein aq_141 OS=Aquifex... [more]
HNT1_SCHPO4.633e-1539.22Hit family protein 1 OS=Schizosaccharomyces pombe ... [more]
YHIT_SYNY31.348e-1439.81Uncharacterized HIT-like protein slr1234 OS=Synech... [more]
HITA_NEIGO1.348e-1440.00Protein hitA OS=Neisseria gonorrhoeae GN=hitA PE=4... [more]
HNT1_YEAST8.737e-1437.86Hit family protein 1 OS=Saccharomyces cerevisiae G... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-070-G08-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665630 ID=EY665630; Name=EY665630; organism=Citrus sinensis; type=EST; length=730bp
ATAGGTATAGCCTCAAATGGGAACACCGAAACGGAGGCTTGCTGTCCTCT
CCTCACATTTACTCCCCACAGGTCCGGCTCCTTCTTCTTCTTCTTCGTCA
GGCGTTTCGGCGTCGTTTTGCGCGCAGCAGCGATTGAGTCGTTCGCAGGA
GAGCGGTCATGAAAACGACTGCGTTTTTTGCAAGATTATCCGGGGCGAAT
CTCCTGCTGTCAAGCTCTATGAAGACGACACGTGCCTGTGTATTTTGGAT
ACCAATCCTCTGAGTCTTGGGCACTCTCTTATTGTCCCGAAATCTCATTT
CTCTTGCTTGGATGCGACTCCTCCATCTGTGGTAGCTGCAATGTGCGCAA
AGGTACCTTTAATCAGCAATGCAATCATGAAAGCCACAGATGCTGATTCA
TTCAACTTGCTGGTTAACAATGGTGCAGCTGCTGGCCAGGTTATATTTCA
CACTCATATCCATATAATTCCCAGAAAGGCACATGATTGCTTATGGACTT
CTGAGAGTTTGAGGCGGCGTCCCTTAAAGATAGACCAGGAAACCTCTCAA
CTGGCTGATCAAGTACGAGAAAAGTTATCAAACATTTGTGAATGTAGTAG
CAAGGGTCAAGAATCCAGTCTCTCATGAATCGTGATGTTTTATTGGATCA
GTGATTGTTGTAATTTACTTATTGAGTTATGACTGTGACATCAATAGTAT
GCTCATTCTTGCAAAAAAAAAAAAAAAAAA
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