CV886882

Overview
NameCV886882
Unique NameCV886882
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length839
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV886882 vs. ExPASy Swiss-Prot
Match: OTUD5_RAT (OTU domain-containing protein 5 OS=Rattus norvegicus GN=Otud5 PE=2 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 5.865e-15
Identity = 41/115 (35.65%), Postives = 61/115 (53.04%), Query Frame = -1
Query:  495 YNRPIHIYSYTTEPINIFHGSYNTDNPPIRLSYHHGNHYNSLVDPRRMTVGAGLGFSCLRGTNXXXXXXXXXXXXXXXXXXDNALLAEGRFYSDLELTEKEIECMVMEVSRAEYL 839
            YNRP+ +Y Y+TEPIN FHG +  ++ PIR+SYH   HYNS+V+P + T+G GLG    +                     +  +L + +  +D E T + IE    +V+R  YL
Sbjct:  292 YNRPVEVYQYSTEPINTFHGIHQNEDEPIRVSYHRNIHYNSVVNPNKATIGVGLGLPSFKPGFAEQSLMKNAIKTSEESWIEQQMLEDKKRATDWEATNEAIE---EQVARESYL 403          
BLAST of CV886882 vs. ExPASy Swiss-Prot
Match: OTUD5_MOUSE (OTU domain-containing protein 5 OS=Mus musculus GN=Otud5 PE=1 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 5.865e-15
Identity = 41/115 (35.65%), Postives = 61/115 (53.04%), Query Frame = -1
Query:  495 YNRPIHIYSYTTEPINIFHGSYNTDNPPIRLSYHHGNHYNSLVDPRRMTVGAGLGFSCLRGTNXXXXXXXXXXXXXXXXXXDNALLAEGRFYSDLELTEKEIECMVMEVSRAEYL 839
            YNRP+ +Y Y+TEPIN FHG +  ++ PIR+SYH   HYNS+V+P + T+G GLG    +                     +  +L + +  +D E T + IE    +V+R  YL
Sbjct:  292 YNRPVEVYQYSTEPINTFHGIHQNEDEPIRVSYHRNIHYNSVVNPNKATIGVGLGLPSFKPGFAEQSLMKNAIKTSEESWIEQQMLEDKKRATDWEATNEAIE---EQVARESYL 403          
BLAST of CV886882 vs. ExPASy Swiss-Prot
Match: OTU5B_XENLA (OTU domain-containing protein 5-B OS=Xenopus laevis GN=otud5-B PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.000e-14
Identity = 41/115 (35.65%), Postives = 60/115 (52.17%), Query Frame = -1
Query:  495 YNRPIHIYSYTTEPINIFHGSYNTDNPPIRLSYHHGNHYNSLVDPRRMTVGAGLGFSCLRGTNXXXXXXXXXXXXXXXXXXDNALLAEGRFYSDLELTEKEIECMVMEVSRAEYL 839
            YNRP+ +Y Y TEPIN FHG    ++ PIR+SYH   HYNS+V+P + T+G GLG    +  +                  +  +L + +  +D E T + IE    +V+R  YL
Sbjct:  250 YNRPVEVYQYGTEPINTFHGIQQNEDEPIRVSYHRNIHYNSVVNPNKATIGVGLGLPSFKPGHAEQSLMKSAIRTSEESWIEQQMLEDKKRATDWEATNEAIE---EQVARESYL 361          
BLAST of CV886882 vs. ExPASy Swiss-Prot
Match: OTU5A_XENLA (OTU domain-containing protein 5-A OS=Xenopus laevis GN=otud5-A PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.229e-14
Identity = 41/115 (35.65%), Postives = 59/115 (51.30%), Query Frame = -1
Query:  495 YNRPIHIYSYTTEPINIFHGSYNTDNPPIRLSYHHGNHYNSLVDPRRMTVGAGLGFSCLRGTNXXXXXXXXXXXXXXXXXXDNALLAEGRFYSDLELTEKEIECMVMEVSRAEYL 839
            YNRP+ +Y Y TEPIN FHG    ++ PIR+SYH   HYNS+V+P + T+G GLG    +                     +  +L + +  +D E T + IE    +V+R  YL
Sbjct:  245 YNRPVEVYQYGTEPINTFHGIQKNEDEPIRVSYHRNIHYNSVVNPNKATIGVGLGLPSFKPGYAEQSLMKSAIRTSEESWIEQQMLEDKKRATDWEATNEAIE---EQVARESYL 356          
BLAST of CV886882 vs. ExPASy Swiss-Prot
Match: OTUD5_XENTR (OTU domain-containing protein 5 OS=Xenopus tropicalis GN=otud5 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.911e-14
Identity = 41/115 (35.65%), Postives = 59/115 (51.30%), Query Frame = -1
Query:  495 YNRPIHIYSYTTEPINIFHGSYNTDNPPIRLSYHHGNHYNSLVDPRRMTVGAGLGFSCLRGTNXXXXXXXXXXXXXXXXXXDNALLAEGRFYSDLELTEKEIECMVMEVSRAEYL 839
            YNRP+ +Y Y TEPIN FHG    ++ PIR+SYH   HYNS+V+P + T+G GLG    +                     +  +L + +  +D E T + IE    +V+R  YL
Sbjct:  250 YNRPVEVYQYGTEPINTFHGIQQNEDEPIRVSYHRNIHYNSVVNPNKATIGVGLGLPSFKPGFAEQSLMKSAIRTSEESWIEQQMLEDKKRATDWEATNEAIE---EQVARESYL 361          
BLAST of CV886882 vs. ExPASy Swiss-Prot
Match: OTUD5_DANRE (OTU domain-containing protein 5 OS=Danio rerio GN=otud5 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.445e-13
Identity = 40/115 (34.78%), Postives = 59/115 (51.30%), Query Frame = -1
Query:  495 YNRPIHIYSYTTEPINIFHGSYNTDNPPIRLSYHHGNHYNSLVDPRRMTVGAGLGFSCLRGTNXXXXXXXXXXXXXXXXXXDNALLAEGRFYSDLELTEKEIECMVMEVSRAEYL 839
            YNRP+ +Y   TEPIN FHG +  ++ PIR+SYH   HYNS+V+P + T+G GLG    +                     +  +L + +  +D E T + IE    +V+R  YL
Sbjct:  290 YNRPVEVYQSGTEPINTFHGIHQNNDEPIRVSYHRNIHYNSVVNPNKATIGVGLGLPAFKPGFADQSLMKNAIKTSEESWIEQQMLEDKKRATDWEATNEAIE---EQVARESYL 401          
BLAST of CV886882 vs. ExPASy Swiss-Prot
Match: OTUD5_HUMAN (OTU domain-containing protein 5 OS=Homo sapiens GN=OTUD5 PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.203e-13
Identity = 41/120 (34.17%), Postives = 61/120 (50.83%), Query Frame = -1
Query:  495 YNRPIHIYSYTT-----EPINIFHGSYNTDNPPIRLSYHHGNHYNSLVDPRRMTVGAGLGFSCLRGTNXXXXXXXXXXXXXXXXXXDNALLAEGRFYSDLELTEKEIECMVMEVSRAEYL 839
            YNRP+ +Y Y+T     EPIN FHG +  ++ PIR+SYH   HYNS+V+P + T+G GLG    +                     +  +L + +  +D E T + IE    +V+R  YL
Sbjct:  292 YNRPVEVYQYSTGTSAVEPINTFHGIHQNEDEPIRVSYHRNIHYNSVVNPNKATIGVGLGLPSFKPGFAEQSLMKNAIKTSEESWIEQQMLEDKKRATDWEATNEAIE---EQVARESYL 408          
The following BLAST results are available for this feature:
BLAST of CV886882 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
OTUD5_RAT5.865e-1535.65OTU domain-containing protein 5 OS=Rattus norvegic... [more]
OTUD5_MOUSE5.865e-1535.65OTU domain-containing protein 5 OS=Mus musculus GN... [more]
OTU5B_XENLA1.000e-1435.65OTU domain-containing protein 5-B OS=Xenopus laevi... [more]
OTU5A_XENLA2.229e-1435.65OTU domain-containing protein 5-A OS=Xenopus laevi... [more]
OTUD5_XENTR2.911e-1435.65OTU domain-containing protein 5 OS=Xenopus tropica... [more]
OTUD5_DANRE1.445e-1334.78OTU domain-containing protein 5 OS=Danio rerio GN=... [more]
OTUD5_HUMAN4.203e-1334.17OTU domain-containing protein 5 OS=Homo sapiens GN... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS04_2_025G09_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_025_T3_G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV886882 ID=CV886882; Name=CV886882; organism=Citrus sinensis; type=EST; length=839bp
TTTTTTTTTTTTTTTTTCAGGCAATAGTCCTACTTTATTGATATTGAGAG
TTACACAATAAAAGTTTCGTACAGATTTTGCTTCCTACTTTTTGCTTTCG
AATGGTAGATGTAACCAGTTACAACGGCAACACAGAGATGCCAACACAGC
TGCTGGCCACATTTTTACCCTGCATTATATAAATTCAGCAGCTTTGCTTA
TTCAGTTGCTTTGCCTTTCCGCCTGCTGCTACTTCCAGTTTCCAACAAAT
AACAAACCATAGAATCAACATCATCCCCAAATATGCTATATGCCTCAATT
ACTTGCAAATAACTGAATCCCATCGAAAGCACCATCTGCATGCTGCTGCT
GAGAACGGTATCCGATAACTCACATCCTTTCCCGCCTTCCAGCTTGGTCT
CACTACATGATGATCTAGCTCCAGAAGATGATGGTTCAGCCCCAGAAGTA
GATGATTCTTTATGGCCAAGTTGCTGCTTCAAATTGTCACCTGCAAGATA
CTCAGCCCGAGAGACTTCCATTACCATGCACTCGATTTCCTTTTCAGTAA
GTTCAAGATCAGAATAAAACCGCCCCTCAGCTAGAAGCGCATTGTCAATC
TGCTGGTCTTGTTGAGCTTTAATGGCAGCCTTAACTTGATCCTTGTCCGC
ATTTGTCCCTCGAAGACAACTGAATCCCAGTCCTGCACCAACTGTCATAC
GCCGGGGGTCCACCAGGGAGTTGTAGTGATTCCCATGATGATAACTCAGC
CGTATTGGAGGATTGTCAGTATTGTAGCTTCCATGAAATATATTGATGGG
TTCAGTTGTATAGGAGTAAATATGAATAGGCCGATTATA
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