EG026657

Overview
NameEG026657
Unique NameEG026657
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length453
Libraries
Library NameType
AbsCFruitcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2568 contig Csv1_Contig2568:330..782. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EG026657 vs. ExPASy Swiss-Prot
Match: LEA5_CITSI (Late embryogenesis abundant protein Lea5 OS=Citrus sinensis GN=LEA5 PE=2 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 1.772e-41
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 1
Query:    1 VADGISLSISRRGYAAAAPLGTISRTGIMEKNDLRPAVREDSGASSAWAPDPITGYYRPENRAVEIDPAELREMLLNHKVRAH 249
            VADGISLSISRRGYAAAAPLGTISRTGIMEKNDLRPAVREDSGASSAWAPDPITGYYRPENRAVEIDPAELREMLLNHKVRAH
Sbjct:   15 VADGISLSISRRGYAAAAPLGTISRTGIMEKNDLRPAVREDSGASSAWAPDPITGYYRPENRAVEIDPAELREMLLNHKVRAH 97          
BLAST of EG026657 vs. ExPASy Swiss-Prot
Match: LEA5D_GOSHI (Late embryogenesis abundant protein Lea5-D OS=Gossypium hirsutum GN=LEA5-D PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 1.118e-19
Identity = 50/90 (55.56%), Postives = 62/90 (68.89%), Query Frame = 1
Query:    1 VADGISLSISRRGYAAAAPLG---TISRTGIMEKNDLRPAVREDSGA-----SSAWAPDPITGYYRPENRAVEIDPAELREMLLNHKVRA 246
            + DG+ +SISRRGY+ A P     +  R G M K + R A++E S +     SSAWAPDP+TGYYRPEN   EID AELREMLLNH+VR+
Sbjct:   15 IFDGLYVSISRRGYSGAPPAAVTASFGRPGAMGKVERRDAMKESSSSETRAYSSAWAPDPVTGYYRPENCGAEIDAAELREMLLNHRVRS 104          
BLAST of EG026657 vs. ExPASy Swiss-Prot
Match: LEA5A_GOSHI (Late embryogenesis abundant protein Lea5-A OS=Gossypium hirsutum GN=LEA5-A PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 2.754e-18
Identity = 48/90 (53.33%), Postives = 61/90 (67.78%), Query Frame = 1
Query:    1 VADGISLSISRRGYAAAAPLG---TISRTGIMEKNDLRPAVREDSGA-----SSAWAPDPITGYYRPENRAVEIDPAELREMLLNHKVRA 246
            V D + +SISRRGY+ A P     +  R G M K + R A++E S +     SSAWAPDP+TGYYRPEN   EID A+LREM+LNH+VR+
Sbjct:   15 VFDALYVSISRRGYSGAPPAAVTASFGRPGAMGKVERRYAMKESSSSETRAYSSAWAPDPVTGYYRPENCGAEIDAADLREMMLNHRVRS 104          
The following BLAST results are available for this feature:
BLAST of EG026657 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
LEA5_CITSI1.772e-41100.00Late embryogenesis abundant protein Lea5 OS=Citrus... [more]
LEA5D_GOSHI1.118e-1955.56Late embryogenesis abundant protein Lea5-D OS=Goss... [more]
LEA5A_GOSHI2.754e-1853.33Late embryogenesis abundant protein Lea5-A OS=Goss... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAK2DG05FM1 AbsCFruit Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG026657 ID=EG026657; Name=EG026657; organism=Citrus sinensis; type=EST; length=453bp
GTTGCTGATGGCATCTCGCTCTCCATTAGCAGGAGAGGATATGCTGCAGC
AGCACCCTTGGGGACCATATCTCGGACTGGTATCATGGAGAAAAATGATT
TGAGGCCTGCGGTGAGAGAGGATTCTGGGGCCTCTTCTGCCTGGGCCCCA
GATCCCATCACTGGGTACTACAGGCCGGAGAATCGGGCGGTCGAGATTGA
TCCAGCAGAGCTTCGAGAGATGCTGTTGAACCACAAAGTCAGGGCACACT
AGGGAGTGGTGGCGCATAGCAGCAGATCCTTTGCTGTTAGCGGTGCTTTA
ACTTTTTAAGTGATGTTGTTACAGTAGCAATTTTGACTCACTCTTAAGTC
TTTGCTGTTGTATTGATATCAACTGTTATTGACAACTTTTAATAGTGCAT
TTCCATGATTTTGTCTATTAACTTGTCAATAAAAGTAAAGAATTCCTGTA
TTG
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