CV886864

Overview
NameCV886864
Unique NameCV886864
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length400
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV886864 vs. ExPASy Swiss-Prot
Match: METE_CATRO (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Catharanthus roseus GN=METE PE=2 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 2.498e-59
Identity = 107/133 (80.45%), Postives = 128/133 (96.24%), Query Frame = 2
Query:    2 ELGPDVNFSYASHKAVQEYKEARALGMETVPVLVGPVSYLLLSKPAKGVEKSFSLLSLIDKIIPVYKEVVAELKAAGATWIQFDEPTLILDLDSHKLQAFSDAYSELQSSLSGLNVLIETYFADVPAETYKIL 400
            ELGP+VNFSYASHKAV EYKEA+ LG++TVPVLVGPV++LLLSKPAKGVEK+F LLSL+DKI+PVYKEV+ ELKAAGA+WIQFDEPTL+LDL+SH+L+AF+ AYSEL+S+LSGLNV++ETYFAD+PAETYKIL
Sbjct:  123 ELGPEVNFSYASHKAVNEYKEAKELGVDTVPVLVGPVTFLLLSKPAKGVEKTFPLLSLLDKILPVYKEVIGELKAAGASWIQFDEPTLVLDLESHQLEAFTKAYSELESTLSGLNVIVETYFADIPAETYKIL 255          
BLAST of CV886864 vs. ExPASy Swiss-Prot
Match: METE_SOLSC (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Solenostemon scutellarioides GN=MET PE=1 SV=2)

HSP 1 Score: 222.246 bits (565), Expect = 6.154e-58
Identity = 107/133 (80.45%), Postives = 124/133 (93.23%), Query Frame = 2
Query:    2 ELGPDVNFSYASHKAVQEYKEARALGMETVPVLVGPVSYLLLSKPAKGVEKSFSLLSLIDKIIPVYKEVVAELKAAGATWIQFDEPTLILDLDSHKLQAFSDAYSELQSSLSGLNVLIETYFADVPAETYKIL 400
            ELGPDV FSYASHKAV EYKEA+ALG++TVPVLVGPVSYL+LSKPAKGVEK+F LLSL+DKI+P+YKEV+AELKAAGA+WIQFDEPTL+LDL+SH+L AF+ AY+EL+SSLSGL+ LIETYFADVPA  YK L
Sbjct:  122 ELGPDVKFSYASHKAVNEYKEAKALGVDTVPVLVGPVSYLILSKPAKGVEKTFPLLSLLDKILPIYKEVIAELKAAGASWIQFDEPTLVLDLESHQLDAFTKAYAELESSLSGLSTLIETYFADVPAPAYKTL 254          
BLAST of CV886864 vs. ExPASy Swiss-Prot
Match: METE_MESCR (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Mesembryanthemum crystallinum GN=METE PE=2 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 4.410e-56
Identity = 105/133 (78.95%), Postives = 123/133 (92.48%), Query Frame = 2
Query:    2 ELGPDVNFSYASHKAVQEYKEARALGMETVPVLVGPVSYLLLSKPAKGVEKSFSLLSLIDKIIPVYKEVVAELKAAGATWIQFDEPTLILDLDSHKLQAFSDAYSELQSSLSGLNVLIETYFADVPAETYKIL 400
            ELGP+VNFSYASHKAV EYKEA+ALG++TVPVLVGPVSYLLLSK AKGV+KSF LLSL+ KI+P+YKEVVAELK AGA+WIQFDEP L++DL+SHKLQAFS AY++L+S+LSGLNV++ETYFADV AE YK L
Sbjct:  123 ELGPEVNFSYASHKAVLEYKEAKALGVDTVPVLVGPVSYLLLSKQAKGVDKSFDLLSLLPKILPIYKEVVAELKEAGASWIQFDEPLLVMDLESHKLQAFSAAYADLESTLSGLNVVVETYFADVTAEAYKTL 255          
BLAST of CV886864 vs. ExPASy Swiss-Prot
Match: METE_ARATH (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Arabidopsis thaliana GN=CIMS PE=1 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 4.410e-56
Identity = 103/133 (77.44%), Postives = 121/133 (90.98%), Query Frame = 2
Query:    2 ELGPDVNFSYASHKAVQEYKEARALGMETVPVLVGPVSYLLLSKPAKGVEKSFSLLSLIDKIIPVYKEVVAELKAAGATWIQFDEPTLILDLDSHKLQAFSDAYSELQSSLSGLNVLIETYFADVPAETYKIL 400
            ELGP+VNFSYASHKAV EYKEA+ALG++TVPVLVGPVSYLLLSK AKGV+KSF LLSL+ KI+P+YKEV+ ELKAAGATWIQ DEP L++DL+  KLQAF+ AY+EL+S+LSGLNVL+ETYFAD+PAE YK L
Sbjct:  123 ELGPEVNFSYASHKAVNEYKEAKALGVDTVPVLVGPVSYLLLSKAAKGVDKSFELLSLLPKILPIYKEVITELKAAGATWIQLDEPVLVMDLEGQKLQAFTGAYAELESTLSGLNVLVETYFADIPAEAYKTL 255          
BLAST of CV886864 vs. ExPASy Swiss-Prot
Match: METE_STRGG (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) GN=metE PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 3.293e-27
Identity = 61/122 (50.00%), Postives = 82/122 (67.21%), Query Frame = 2
Query:    2 ELGPDVNFSYASHKAVQEYKEARALGMETVPVLVGPVSYLLLSKPAKGVEKSFSLLSLIDKIIPVYKEVVAELKAAGATWIQFDEPTLILDLDSHKLQAFSDAYSELQSSLSGLNVLIETYF 367
            ELGPD  FS  S K V E++EA ALG    PVLVGP++YLLL+K A GV   F  L+L+D+++PVY E++A+L+AAGATW+Q DEP L+ D    +L A + AY EL        +L+ +YF
Sbjct:  132 ELGPDTVFSADSAKQVAEFREALALGWTPRPVLVGPLTYLLLAKAAPGVAADFEPLTLLDRLLPVYAEILADLRAAGATWVQLDEPALVQDRTPAELNAAARAYRELGGRADRPQLLVASYF 253          
BLAST of CV886864 vs. ExPASy Swiss-Prot
Match: METE_STRAW (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Streptomyces avermitilis GN=metE PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 2.135e-26
Identity = 62/122 (50.82%), Postives = 79/122 (64.75%), Query Frame = 2
Query:    2 ELGPDVNFSYASHKAVQEYKEARALGMETVPVLVGPVSYLLLSKPAKGVEKSFSLLSLIDKIIPVYKEVVAELKAAGATWIQFDEPTLILDLDSHKLQAFSDAYSELQSSLSGLNVLIETYF 367
            ELGPD  FS  S K V E  EA ALG+   PVLVGPV+YLLL+KPA GV   F  L+L+D+++PVY EV+A+L+AAGA W+Q DEP L+ D    +L A   AY  L        +L+ +YF
Sbjct:  132 ELGPDTVFSTDSAKQVAELGEALALGLTARPVLVGPVTYLLLAKPAPGVAADFDPLTLLDRLLPVYAEVLADLRAAGAEWVQLDEPALVQDRTPAELNAAERAYRVLGGLTDRPKLLVASYF 253          
BLAST of CV886864 vs. ExPASy Swiss-Prot
Match: METE_RHOPA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Rhodopseudomonas palustris GN=metE PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 4.756e-26
Identity = 57/122 (46.72%), Postives = 81/122 (66.39%), Query Frame = 2
Query:    2 ELGPDVNFSYASHKAVQEYKEARALGMETVPVLVGPVSYLLLSKPAKGVEKSFSLLSLIDKIIPVYKEVVAELKAAGATWIQFDEPTLILDLDSHKLQAFSDAYSELQSSLSGLNVLIETYF 367
            E     +F  AS K ++EY+EA+ALG +T PVL+GPV+YL L K A   +    +LSL+ K++PVY E++  L AAGA W+Q DEP L+LDLD  +  AF DAY ++   L  L++++ TYF
Sbjct:  152 EFSAGQSFQLASVKPLEEYREAKALGYDTRPVLLGPVTYLKLGKSA---DAGLDVLSLLPKLVPVYIEILGRLAAAGAKWVQLDEPALVLDLDDRERLAFRDAYGQIARELPHLDIMLTTYF 270          
BLAST of CV886864 vs. ExPASy Swiss-Prot
Match: METE_RHOPT (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Rhodopseudomonas palustris (strain TIE-1) GN=metE PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 6.211e-26
Identity = 57/122 (46.72%), Postives = 81/122 (66.39%), Query Frame = 2
Query:    2 ELGPDVNFSYASHKAVQEYKEARALGMETVPVLVGPVSYLLLSKPAKGVEKSFSLLSLIDKIIPVYKEVVAELKAAGATWIQFDEPTLILDLDSHKLQAFSDAYSELQSSLSGLNVLIETYF 367
            E     +F  AS K ++EY+EA+ALG +T PVL+GPV+YL L K A   +    +LSL+ K++PVY E++  L AAGA W+Q DEP L+LDLD  +  AF DAY ++   L  L++++ TYF
Sbjct:  152 EFSAGQSFQLASLKPLEEYREAKALGYDTRPVLLGPVTYLKLGKSA---DARLDVLSLLPKLVPVYIEILGRLAAAGAKWVQLDEPALVLDLDDRERLAFRDAYGQIARELPHLDIMLTTYF 270          
BLAST of CV886864 vs. ExPASy Swiss-Prot
Match: METE_STRCO (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Streptomyces coelicolor GN=metE PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 8.112e-26
Identity = 59/122 (48.36%), Postives = 78/122 (63.93%), Query Frame = 2
Query:    2 ELGPDVNFSYASHKAVQEYKEARALGMETVPVLVGPVSYLLLSKPAKGVEKSFSLLSLIDKIIPVYKEVVAELKAAGATWIQFDEPTLILDLDSHKLQAFSDAYSELQSSLSGLNVLIETYF 367
            ELGPD  F+  S K V E  EA ALG+   PVLVGPV+YLLL+KPA G    F  L+L+D+++PVY EV+ +L+AAGA W+Q DEP  + D    +L A   AY EL +      +L+ +YF
Sbjct:  132 ELGPDTVFTADSTKQVTELAEAVALGLTARPVLVGPVTYLLLAKPAPGAPADFEPLTLLDRLLPVYAEVLTDLRAAGAEWVQLDEPAFVQDRTPAELNALERAYRELGALTDRPKLLVASYF 253          
BLAST of CV886864 vs. ExPASy Swiss-Prot
Match: METE_XYLFA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Xylella fastidiosa GN=metE PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 1.432e-22
Identity = 54/122 (44.26%), Postives = 82/122 (67.21%), Query Frame = 2
Query:    2 ELGPDVNFSYASHKAVQEYKEARALGMETVPVLVGPVSYLLLSKPAKGVEKSFSLLSLIDKIIPVYKEVVAELKAAGATWIQFDEPTLILDLDSHKLQAFSDAYSELQSSLSGLNVLIETYF 367
            EL  D +F+   +K + E++EA ALG+ T PVL+GPVS+LLLSK   G  +    L L+++++PVY +++ +L+A+GA W+Q DEPTL+LDLD+   QAF  AY+ L        +L+ +YF
Sbjct:  128 ELHRDQHFALRGNKPIAEFEEALALGITTRPVLLGPVSFLLLSKTVDGSNR----LDLLERLLPVYTQLLRQLQASGAEWVQIDEPTLVLDLDAQTQQAFRKAYAALNQG-PRPKLLLTSYF 244          
The following BLAST results are available for this feature:
BLAST of CV886864 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 216
Match NameE-valueIdentityDescription
METE_CATRO2.498e-5980.455-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SOLSC6.154e-5880.455-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_MESCR4.410e-5678.955-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ARATH4.410e-5677.445-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STRGG3.293e-2750.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STRAW2.135e-2650.825-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_RHOPA4.756e-2646.725-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_RHOPT6.211e-2646.725-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STRCO8.112e-2648.365-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_XYLFA1.432e-2244.265-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_025F10_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_025_T3_F10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV886864 ID=CV886864; Name=CV886864; organism=Citrus sinensis; type=EST; length=400bp
TGAATTGGGACCGGATGTCAACTTCTCTTATGCATCTCACAAGGCTGTTC
AAGAGTATAAGGAAGCCAGAGCTCTTGGCATGGAAACTGTTCCTGTCCTT
GTAGGCCCTGTTTCCTATTTGTTGTTATCTAAACCAGCAAAGGGTGTAGA
GAAATCCTTTTCTCTTCTTTCCCTAATTGACAAGATTATTCCTGTCTACA
AGGAAGTTGTGGCTGAGCTAAAGGCTGCTGGTGCCACCTGGATTCAGTTT
GATGAGCCAACTCTTATCCTGGACCTTGATTCTCACAAATTACAAGCATT
TTCTGATGCATACTCAGAGCTGCAGTCATCGCTATCTGGTTTGAATGTGT
TAATTGAGACGTACTTTGCTGATGTTCCTGCAGAGACATACAAAATACTC
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