CX043504

Overview
NameCX043504
Unique NameCX043504
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length762
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5703 contig Csv1_Contig5703:731..1493. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of CX043504 vs. ExPASy Swiss-Prot
Match: ULT1_ARATH (Protein ULTRAPETALA 1 OS=Arabidopsis thaliana GN=ULT1 PE=1 SV=1)

HSP 1 Score: 335.88 bits (860), Expect = 1.479e-91
Identity = 145/190 (76.32%), Postives = 166/190 (87.37%), Query Frame = -1 
Query:  193 AVGRLRVFSNGDLEITCECTPGCNEDKMTPGAFEKHSGRETARKWKNNVWVIANGEKVPLSKTVLLKYYNQASKHGNGSHRSHNGRVCHRDEFVRCARCNKERRFRLRTKEECLIHHNALADKNWKCSDLPYDKITCDDEEERASRRVYRGCIRSPTCKGCTSCVCFGCDICRFSDCSCQTCIDFTRNAK 762
            AV RLRVF  GDLEITCECTPGC+EDK+TP AFEKHSGRETARKWKNNVWVI  GEKVPLSKTVLLKYYN++SK  + S+RS   +VCHRDEFV C  C KERRFRLR+++EC +HHNA+ D NWKCSD PYDKITC++EEER SR+VYRGC RSP+CKGCTSCVCFGC++CRFS+C+CQTC+DFT N K
Sbjct:   47 AVARLRVFPTGDLEITCECTPGCDEDKLTPAAFEKHSGRETARKWKNNVWVIIGGEKVPLSKTVLLKYYNESSKKCSRSNRSQGAKVCHRDEFVGCNDCGKERRFRLRSRDECRLHHNAMGDPNWKCSDFPYDKITCEEEEERGSRKVYRGCTRSPSCKGCTSCVCFGCELCRFSECTCQTCVDFTSNVK 236
[Close]
BLAST of CX043504 vs. ExPASy Swiss-Prot
Match: ULT2_ARATH (Protein ULTRAPETALA 2 OS=Arabidopsis thaliana GN=ULT2 PE=2 SV=1)

HSP 1 Score: 300.827 bits (769), Expect = 5.273e-81
Identity = 130/190 (68.42%), Postives = 159/190 (83.68%), Query Frame = -1 
Query:  193 AVGRLRVFSNGDLEITCECTPGCNEDKMTPGAFEKHSGRETARKWKNNVWVIANGEKVPLSKTVLLKYYNQASKHGNGSHRSHNGRVCHRDEFVRCARCNKERRFRLRTKEECLIHHNALADKNWKCSDLPYDKITCDDEEERASRRVYRGCIRSPTCKGCTSCVCFGCDICRFSDCSCQTCIDFTRNAK 762
            AV RL++FS+G+L+ITC+CTP C EDK+TP AFEKHS RET+R W+NNVWV   G+KVPLSKTVLL+YYN+A K+ N S      +V HRDEFV C+ C KERRFRLR++ EC +HH+A+A+ NWKC D PYDKITC++EEER SR+V+RGC RSP+CKGCTSCVCFGC +CRFSDC+CQTC+DFT NAK
Sbjct:   43 AVARLKIFSDGELQITCQCTPACLEDKLTPAAFEKHSERETSRNWRNNVWVFIEGDKVPLSKTVLLRYYNKALKNSNVS------KVIHRDEFVGCSTCGKERRFRLRSRGECRMHHDAIAEPNWKCCDYPYDKITCEEEEERGSRKVFRGCTRSPSCKGCTSCVCFGCKLCRFSDCNCQTCLDFTTNAK 226
The following BLAST results are available for this feature:
BLAST of CX043504 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
ULT1_ARATH1.479e-9176.32Protein ULTRAPETALA 1 OS=Arabidopsis thaliana GN=U... [more]
ULT2_ARATH5.273e-8168.42Protein ULTRAPETALA 2 OS=Arabidopsis thaliana GN=U... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS07_11E04_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-11E04-I7-1-7.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043504 ID=CX043504; Name=CX043504; organism=Citrus sinensis; type=EST; length=762bp
TTTTGAAGTTTTTGAACCAGTCAATGAGAACGGATACTGAACGCAGAGAC
TGGAAATTTCAGTCAAAGACAAGAGCATGACAGAGGGCTTCTGTGAACGG
GGGAGGGACTTTCATGAAACAACAATTGTCATGAAAATCCCAACCAAAGA
GAGGAACAGTCAGGTTGAAAAGATTACTCCAGAGATTCAAGTTTTGGCAT
TCCTTGTGAAGTCAATGCATGTCTGGCAGCTGCAGTCGGAAAAACGACAG
ATATCACAGCCAAAGCAAACACATGAAGTGCAGCCCTTGCATGTTGGAGA
ACGAATGCATCCCCTATAAACCCTTCGACTAGCTCTCTCCTCTTCATCAT
CACAGGTTATTTTGTCATAGGGCAGATCAGAACACTTCCAATTCTTATCA
GCTAGAGCATTATGGTGAATAAGACATTCCTCTTTGGTACGTAGTCGGAA
CCTACGCTCCTTGTTACACCTAGCACAACGAACAAACTCGTCACGGTGAC
AAACCCGGCCATTGTGGGATCTGTGAGAACCATTTCCATGTTTTGATGCT
TGGTTATAGTACTTGAGCAACACCGTCTTTGACAATGGAACCTTCTCTCC
ATTAGCTATGACCCAGACATTGTTCTTCCACTTTCTTGCTGTCTCTCTTC
CAGAATGCTTCTCAAATGCACCAGGAGTCATCTTGTCTTCATTGCAACCA
GGAGTGCATTCACAGGTGATTTCTAGGTCACCATTAGAGAAAACCCTAAG
CCTGCCAACAGC
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