CX044031

Overview
NameCX044031
Unique NameCX044031
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length607
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX044031 vs. ExPASy Swiss-Prot
Match: HIS2_ARATH (Histidine biosynthesis bifunctional protein hisIE, chloroplastic OS=Arabidopsis thaliana GN=At1g31860 PE=2 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 8.554e-40
Identity = 85/112 (75.89%), Postives = 96/112 (85.71%), Query Frame = 3
Query:   15 GNNLAMTTLYSLESTISQRKAAS---ENGKPSWTKRLLLDSKLLCSKIREEADELCRTLEENEDNSRTASEMADVLYHAMVLLALKDVKAEEVLEVLRKRFSQSGIEEKRSR 341
            GN LA+TTLYSLES IS+RK  S   + GKPSWT+RLL D  LLCSKIREEADELCRTLE+NE+ SRT SEMADVLYHAMVLL+ + VK E+VLEVLRKRFSQSGIEEK++R
Sbjct:  168 GNKLALTTLYSLESIISKRKEESTVPQEGKPSWTRRLLTDDALLCSKIREEADELCRTLEDNEEVSRTPSEMADVLYHAMVLLSKRGVKMEDVLEVLRKRFSQSGIEEKQNR 279          
BLAST of CX044031 vs. ExPASy Swiss-Prot
Match: HIS21_RHOPA (Phosphoribosyl-ATP pyrophosphatase 1 OS=Rhodopseudomonas palustris GN=hisE1 PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.287e-11
Identity = 47/107 (43.93%), Postives = 62/107 (57.94%), Query Frame = 3
Query:   24 LAMTTLYSLESTISQRKAASENGKPSWTKRLLLDSKLLCSK-IREEADELCRTLEENEDNSRTASEMADVLYHAMVLLALKDVKAEEVLEVLRKRFSQSGIEEKRSR 341
            +A  TL+ L +T+  R  A+  G+ S+TK+LL      C+K   EEA E+     EN D     SE ADVL+H +VLL  + VK EEV   L +R S SG+EEK SR
Sbjct:    1 MARFTLHDLAATVDAR--AASGGESSYTKKLLDKGPEHCAKKFGEEAVEMVIAAVEN-DRGHLISETADVLFHMLVLLKSRGVKLEEVEAALAQRTSMSGLEEKASR 104          
BLAST of CX044031 vs. ExPASy Swiss-Prot
Match: HIS2_SILST (Phosphoribosyl-ATP pyrophosphatase OS=Silicibacter sp. (strain TM1040) GN=hisE PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 3.745e-11
Identity = 45/105 (42.86%), Postives = 61/105 (58.10%), Query Frame = 3
Query:   30 MTTLYSLESTISQRKAASENGKPSWTKRLLLDSKLLCS-KIREEADELCRTLEENEDNSRTASEMADVLYHAMVLLALKDVKAEEVLEVLRKRFSQSGIEEKRSR 341
            MT L+ LE TI  RK    +   SWT +LL      C+ K  EEA E      + +D ++ ASE ADVLYH +V+LA +DV  ++VL VL +R   SG+ EK +R
Sbjct:    1 MTLLHDLEQTILSRKGTDPD--TSWTAKLLSKGPEKCAEKFGEEAIEAIIEAVK-DDKAKLASEGADVLYHFLVMLAARDVALDDVLTVLAERQGLSGLAEKAAR 102          
BLAST of CX044031 vs. ExPASy Swiss-Prot
Match: HIS2_RHOS1 (Phosphoribosyl-ATP pyrophosphatase OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) GN=hisE PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 4.891e-11
Identity = 46/105 (43.81%), Postives = 56/105 (53.33%), Query Frame = 3
Query:   30 MTTLYSLESTISQRKAASENGKPSWTKRLLLDSKLLCS-KIREEADELCRTLEENEDNSRTASEMADVLYHAMVLLALKDVKAEEVLEVLRKRFSQSGIEEKRSR 341
            MT L  L +T+  RK A  +   SWT +LL      C+ K  EEA E         D +R ASE ADVLYH +V+LA +DV   EV+ VL  R   SGI EK  R
Sbjct:    1 MTVLERLAATVEARKGADPDS--SWTAKLLAKGPEKCAEKFGEEAVEAIIEAVRG-DRARLASEAADVLYHLLVMLAARDVTLAEVMAVLEAREGTSGIAEKAGR 102          
BLAST of CX044031 vs. ExPASy Swiss-Prot
Match: HIS2_DINSH (Phosphoribosyl-ATP pyrophosphatase OS=Dinoroseobacter shibae (strain DFL 12) GN=hisE PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 4.891e-11
Identity = 46/105 (43.81%), Postives = 59/105 (56.19%), Query Frame = 3
Query:   30 MTTLYSLESTISQRKAASENGKPSWTKRLLLDSKLLCS-KIREEADELCRTLEENEDNSRTASEMADVLYHAMVLLALKDVKAEEVLEVLRKRFSQSGIEEKRSR 341
            M+ L  LE+TI+ RK A  +   SWT +LL      C+ K  EEA E      +  D ++  SE ADVLYH +V+LA +DV   EVL  L +R   SGI EK SR
Sbjct:    1 MSVLARLEATIAARKGADPDS--SWTAKLLAKGPEKCAEKFGEEAVEAIIEAVKG-DRAKLTSEAADVLYHLLVMLAARDVALAEVLAELERREGISGISEKASR 102          
The following BLAST results are available for this feature:
BLAST of CX044031 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
HIS2_ARATH8.554e-4075.89Histidine biosynthesis bifunctional protein hisIE,... [more]
HIS21_RHOPA1.287e-1143.93Phosphoribosyl-ATP pyrophosphatase 1 OS=Rhodopseud... [more]
HIS2_SILST3.745e-1142.86Phosphoribosyl-ATP pyrophosphatase OS=Silicibacter... [more]
HIS2_RHOS14.891e-1143.81Phosphoribosyl-ATP pyrophosphatase OS=Rhodobacter ... [more]
HIS2_DINSH4.891e-1143.81Phosphoribosyl-ATP pyrophosphatase OS=Dinoroseobac... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS07_14H11_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-14H11-P22-1-7.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX044031 ID=CX044031; Name=CX044031; organism=Citrus sinensis; type=EST; length=607bp
ATCAGCCGGTTCAAGGAAATAATTTGGCAATGACAACGTTGTACTCGTTA
GAGTCCACAATTTCCCAGAGAAAAGCAGCATCGGAAAATGGGAAACCTTC
TTGGACTAAACGATTATTACTCGATAGCAAATTGCTGTGCTCAAAAATTC
GTGAAGAAGCAGATGAATTATGCCGAACACTGGAGGAGAATGAGGATAAT
TCACGTACTGCCTCTGAAATGGCAGATGTGCTGTATCATGCCATGGTTTT
GCTCGCGCTCAAAGATGTAAAAGCAGAAGAAGTACTGGAAGTTCTCCGAA
AGAGGTTTTCACAGTCAGGTATTGAAGAAAAGAGAAGTCGTGTTTCAGAA
AACTAGGCATGGACTTGTATCTTGTAAATTGGGAAATAAGATGAGAATTA
ATATATTTTCATGTGTTCCCAGCAAATTATGCTACATCAGATCCTTTTCA
CCAGTTGAGTTACTGTAGCTTAGTGCATTCATTCAGCCTCTTTGCATTGC
TTTCTATTTTTATCTATGTTTTACAGAGACCGTATGTCTGATAACTTGGA
GCAGTGTGAGCTTCTTTTAATACTTAATTTATGCCACCATATTTATCACA
AAAAAAA
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