CV886848

Overview
NameCV886848
Unique NameCV886848
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length958
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV886848 vs. ExPASy Swiss-Prot
Match: AL3H1_ARATH (Aldehyde dehydrogenase family 3 member H1 OS=Arabidopsis thaliana GN=ALDH3H1 PE=2 SV=2)

HSP 1 Score: 367.466 bits (942), Expect = 6.536e-101
Identity = 175/254 (68.90%), Postives = 210/254 (82.68%), Query Frame = -1
Query:  197 SGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXNFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRGFIGDVPVRYPPYTKGKLRLLKVLISGSLLGIIRALLG 958
            S  +LKV  RR+I+GKWGCNNGQAC+SPD+I+TTK+YAP            FYGKNP+ESKD+SRIVNSNHF RLSKLLD+ +VS KIV+GGE+D+  L+IAPT+LLDVP DSLIMSEEIFGPLLPILT++ +E+SFD+I S  KPLAAYLFT+NKKLK++F  TVSAGG+V+ND AVHLA+H+LPFGGV ESGMGAYHGKFSFD FSHKKAVL R   GD  VRYPPY++GKLRLLK L+  ++  + + LLG
Sbjct:  229 SDTDLKVTVRRIIVGKWGCNNGQACVSPDYILTTKEYAPKLIDAMKLELEKFYGKNPIESKDMSRIVNSNHFDRLSKLLDEKEVSDKIVYGGEKDRENLKIAPTILLDVPLDSLIMSEEIFGPLLPILTLNNLEESFDVIRSRPKPLAAYLFTHNKKLKERFAATVSAGGIVVNDIAVHLALHTLPFGGVGESGMGAYHGKFSFDAFSHKKAVLYRSLFGDSAVRYPPYSRGKLRLLKALVDSNIFDLFKVLLG 482          
BLAST of CV886848 vs. ExPASy Swiss-Prot
Match: AL3I1_ARATH (Aldehyde dehydrogenase family 3 member I1, chloroplastic OS=Arabidopsis thaliana GN=ALDH3I1 PE=2 SV=2)

HSP 1 Score: 315.849 bits (808), Expect = 2.257e-85
Identity = 154/257 (59.92%), Postives = 191/257 (74.32%), Query Frame = -1
Query:  188 SGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXNFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRGFIGDVPVRYPPYTKGKLRLLKVLISGSLLGIIRALLGWSK 958
            S +NL+VA RR+I GKW CN+GQACI  D++ITTKD+A             F+G+N LESKDLSRIVNS HF RL  +L ++ V+ KIVHGG   ++KL+I+PT+LLDVP  S +M EEIFGPLLPI+TV KIED F +I S  KPLAAYLFTNNK+L++QFV+ VSAGG+ INDT +H+ V  LPFGGV ESG+GAYHGKFS++ FSHKK VL R F GD  +RYPPYT  K  +LK L+S ++   I A  G+SK
Sbjct:  292 SDVNLQVAARRIIAGKWACNSGQACIGVDYVITTKDFASKLIDALKTELETFFGQNALESKDLSRIVNSFHFKRLESMLKENGVANKIVHGGRITEDKLKISPTILLDVPEASSMMQEEIFGPLLPIITVQKIEDGFQVIRSKPKPLAAYLFTNNKELEKQFVQDVSAGGITINDTVLHVTVKDLPFGGVGESGIGAYHGKFSYETFSHKKGVLYRSFSGDADLRYPPYTPKKKMVLKALLSSNIFAAILAFFGFSK 548          
BLAST of CV886848 vs. ExPASy Swiss-Prot
Match: ALDH_CRAPL (Aldehyde dehydrogenase OS=Craterostigma plantagineum GN=ALDH PE=1 SV=1)

HSP 1 Score: 309.301 bits (791), Expect = 2.112e-83
Identity = 150/256 (58.59%), Postives = 190/256 (74.22%), Query Frame = -1
Query:  191 SGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXNFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRGFIGDVPVRYPPYTKGKLRLLKVLISGSLLGIIRALLGWS 958
            + I+LKVA RR+I  KW  N+GQ CISPD+IITT++ AP           +FYGK+PL+S+D+S I+N   F R++ LLDD KVS KIV+GG+ DK+ L+IAPT+LLDV  DS +MSEEIFGPLLPI+TV KIE+ + II S  KPLAAYLFTN+KK  ++FV  VSAGG+ IND A+H     LPFGGV ESGMG+YHGKFSFD FSHKK+VL R F G+V  RYPPY   KL  ++ ++ G + G+++A LGWS
Sbjct:  223 ANIDLKVAARRIISWKWSGNSGQTCISPDYIITTEENAPKLVDAIKCELESFYGKDPLKSQDMSSIINERQFERMTGLLDDKKVSDKIVYGGQSDKSNLKIAPTILLDVSEDSSVMSEEIFGPLLPIITVGKIEECYKIIASKPKPLAAYLFTNDKKRTEEFVSNVSAGGITINDIALHFLEPRLPFGGVGESGMGSYHGKFSFDAFSHKKSVLKRSFGGEVAARYPPYAPWKLHFMEAILQGDIFGLLKAWLGWS 478          
BLAST of CV886848 vs. ExPASy Swiss-Prot
Match: AL3F1_ARATH (Aldehyde dehydrogenase family 3 member F1 OS=Arabidopsis thaliana GN=ALDH3F1 PE=1 SV=2)

HSP 1 Score: 236.113 bits (601), Expect = 2.273e-61
Identity = 116/251 (46.22%), Postives = 161/251 (64.14%), Query Frame = -1
Query:  197 NLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXNFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRGFIGDVPVRYPPYTKGKLRLLKVLISGSLLGIIRALLG 949
            N+K   +R+  GKWG  NGQACIS D+++  K +AP           +F+G+NP ES  LSRI N +H  RLS+LL D +V   IV+GG  D++KL + PT+LLD P DS IM+EEIFGP+LPI+TV  I++S  IIN+  KPLA Y FTN++ LK + +   S+G +  ND  +     +LPFGGV ESG+G YHGK+SFD FSH+KA++      D+  RYPP+   KL  +++    +   +I  +LG
Sbjct:  231 NIKSVVKRIAGGKWGSCNGQACISVDYVLIEKSFAPTLIDMLKPTIKSFFGENPKESGCLSRIANKHHVQRLSRLLSDPRVQASIVYGGSIDEDKLYVEPTILLDPPLDSEIMNEEIFGPILPIITVRDIQESIGIINTKPKPLAIYAFTNDENLKTRILSETSSGSVTFNDVMIQYMCDALPFGGVGESGIGRYHGKYSFDCFSHEKAIMEGSLGMDLEARYPPWNNFKLTFIRLAFREAYFKLILLMLG 481          
BLAST of CV886848 vs. ExPASy Swiss-Prot
Match: AL3A2_RAT (Fatty aldehyde dehydrogenase OS=Rattus norvegicus GN=Aldh3a2 PE=1 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 1.382e-50
Identity = 104/240 (43.33%), Postives = 149/240 (62.08%), Query Frame = -1
Query:  236 NLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXNFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRGFIGDV--PVRYPPYTKGKLRLLKVLI 949
            +L VACRR+  GK+  N GQ CI+PD+I+                  +FYG+N   S D  RI+N  HF R+  LL+  K++     GGE D+    IAPT+L DV  +S +M EEIFGP+LPI++V  +E++ + IN   KPLA Y+F++N KL ++ ++  S+GG+  ND  +H  V+SLPFGGV  SGMGAYHGK+SFD FSH++  L +G  G+    +RYPP ++ K+   K  +
Sbjct:  221 DLDVACRRITWGKY-MNCGQTCIAPDYILCEASSQDQIVQKIKDTVKDFYGENVKASPDYERIINLRHFKRIKSLLEGQKIA----FGGETDEATRYIAPTILTDVDPNSKVMQEEIFGPILPIVSVKNVEEAINFINDREKPLALYIFSHNNKLIKRVIDETSSGGVTGNDVIMHFTVNSLPFGGVGASGMGAYHGKYSFDTFSHQRPCLLKGLKGESVNKLRYPPNSESKVSWSKFFL 455          
BLAST of CV886848 vs. ExPASy Swiss-Prot
Match: AL3A2_MOUSE (Fatty aldehyde dehydrogenase OS=Mus musculus GN=Aldh3a2 PE=2 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 1.170e-49
Identity = 103/240 (42.92%), Postives = 147/240 (61.25%), Query Frame = -1
Query:  236 NLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXNFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRGFIGDV--PVRYPPYTKGKLRLLKVLI 949
            +L VACRR+  GK+  N GQ CI+PD+I+                  +FYG+N   S D  RI+N  HF RL  LL   K++     GGE D+    +APT+L DV  +S +M EEIFGP+LPI++V  ++++ + IN   KPLA Y+F+ N KL ++ ++  S+GG+  ND  +H  V+SLPFGGV  SGMGAYHGK+SFD FSH++  L +G  G+    +RYPP ++ K+   K  +
Sbjct:  221 DLDVACRRVAWGKY-MNCGQTCIAPDYILCEASLQNQIVQKIKETVKDFYGENIKASPDYERIINLRHFKRLQSLLKGQKIA----FGGEMDEATRYLAPTILTDVDPNSKVMQEEIFGPILPIVSVKNVDEAINFINDREKPLALYVFSRNNKLIKRVIDETSSGGVTGNDVIMHFTVNSLPFGGVGASGMGAYHGKYSFDAFSHQRPCLLKGLKGESVNKLRYPPNSESKVSWAKFFL 455          
BLAST of CV886848 vs. ExPASy Swiss-Prot
Match: AL3A1_RAT (Aldehyde dehydrogenase, dimeric NADP-preferring OS=Rattus norvegicus GN=Aldh3a1 PE=1 SV=3)

HSP 1 Score: 194.897 bits (494), Expect = 5.806e-49
Identity = 97/227 (42.73%), Postives = 144/227 (63.44%), Query Frame = -1
Query:  275 NLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXNFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRGFIGDV--PVRYPP 949
            +L VACRR+  GK+  N+GQ C++PD+I+                  +FYG++  +S+D  RI+N  HF R+  L+D+ KV+    HGG  D++   IAPT+L+DV   S +M EEIFGP++PI+ V  +E++   IN   KPLA Y+F+NN+K+ ++ +   S+GG+  ND  VH+ V +LPFGGV  SGMGAYHGK SF+ FSH+++ L +  + +     RYPP
Sbjct:  224 DLDVACRRIAWGKF-MNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKDFYGEDAKQSRDYGRIINDRHFQRVKGLIDNQKVA----HGGTWDQSSRYIAPTILVDVDPQSPVMQEEIFGPVMPIVCVRSLEEAIQFINQREKPLALYVFSNNEKVIKKMIAETSSGGVTANDVIVHITVPTLPFGGVGNSGMGAYHGKKSFETFSHRRSCLVKSLLNEEAHKARYPP 445          
BLAST of CV886848 vs. ExPASy Swiss-Prot
Match: AL3A1_HUMAN (Aldehyde dehydrogenase, dimeric NADP-preferring OS=Homo sapiens GN=ALDH3A1 PE=1 SV=2)

HSP 1 Score: 190.66 bits (483), Expect = 1.095e-47
Identity = 97/227 (42.73%), Postives = 142/227 (62.56%), Query Frame = -1
Query:  275 NLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXNFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRGFIGD--VPVRYPP 949
            +L VACRR+  GK+  N+GQ C++PD+I+                   FYG++  +S+D  RI+++ HF R+  L++  KV+    +GG  D     IAPT+L DV   S +M EEIFGP+LPI+ V  +E++   IN   KPLA Y+F++N K+ ++ +   S+GG+  ND  VH+ +HSLPFGGV  SGMG+YHGK SF+ FSH+++ L R  + D  + VRYPP
Sbjct:  224 DLDVACRRIAWGKF-MNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEFYGEDAKKSRDYGRIISARHFQRVMGLIEGQKVA----YGGTGDAATRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCVRSLEEAIQFINQREKPLALYMFSSNDKVIKKMIAETSSGGVAANDVIVHITLHSLPFGGVGNSGMGSYHGKKSFETFSHRRSCLVRPLMNDEGLKVRYPP 445          
BLAST of CV886848 vs. ExPASy Swiss-Prot
Match: AL3A1_CANFA (Aldehyde dehydrogenase, dimeric NADP-preferring OS=Canis familiaris GN=ALDH3A1 PE=2 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.868e-47
Identity = 96/227 (42.29%), Postives = 141/227 (62.11%), Query Frame = -1
Query:  275 NLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXNFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRGFIGD--VPVRYPP 949
            +L +ACRR+  GK+  N+GQ C++PD+I+                   FYG++  +S+D  RI+NS HF R+  L++  KV+    +GG  D     IAPT+L+DV   S +M EEIFGP++PI+ V  +E++   IN   KPLA Y+F+ N K+ ++ +   S+GG+  ND  VH++VHSLP+GGV  SGMG+YHGK SF+ FSH ++ L R  + D  +  RYPP
Sbjct:  224 DLDIACRRIAWGKF-MNSGQTCVAPDYILCDPSIQNQIVEKLKKALKEFYGEDAKKSRDYGRIINSRHFQRVMGLMEGQKVA----YGGTGDAATRYIAPTILIDVDTQSQVMQEEIFGPVMPIVCVRSLEEAIQFINQREKPLALYVFSLNDKMIKKMIAETSSGGVTANDVIVHVSVHSLPYGGVGNSGMGSYHGKKSFETFSHCRSCLVRPLLNDESLKTRYPP 445          
BLAST of CV886848 vs. ExPASy Swiss-Prot
Match: AL3A1_MOUSE (Aldehyde dehydrogenase, dimeric NADP-preferring OS=Mus musculus GN=Aldh3a1 PE=2 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 3.186e-47
Identity = 97/227 (42.73%), Postives = 139/227 (61.23%), Query Frame = -1
Query:  275 NLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXNFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRGFIGDV--PVRYPP 949
            +L VACRR+  GK+  N+GQ C++PD+I+                  +FYG++  +S D  RI+N  HF R+  L+D    S K+ HGG  D+    IAPT+L+DV   S +M EEIFGP++PI+ V  ++++   IN   KPLA Y+F+NN K+ ++ +   S+GG+  ND  VH+ V +LPFGGV  SGMGAYHGK SF+ FSH+++ L R    +     RYPP
Sbjct:  224 DLDVACRRIAWGKF-MNSGQTCVAPDYILCDPSIQNEIVEKLKKSLKDFYGEDAKQSHDYGRIINDRHFQRVINLID----SKKVAHGGTWDQPSRYIAPTILVDVDPQSPVMQEEIFGPVMPIVCVRSLDEAIKFINQREKPLALYVFSNNDKVIKKMIAETSSGGVTANDVIVHITVPTLPFGGVGNSGMGAYHGKKSFETFSHRRSCLVRSLRNEEANKARYPP 445          
The following BLAST results are available for this feature:
BLAST of CV886848 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 94
Match NameE-valueIdentityDescription
AL3H1_ARATH6.536e-10168.90Aldehyde dehydrogenase family 3 member H1 OS=Arabi... [more]
AL3I1_ARATH2.257e-8559.92Aldehyde dehydrogenase family 3 member I1, chlorop... [more]
ALDH_CRAPL2.112e-8358.59Aldehyde dehydrogenase OS=Craterostigma plantagine... [more]
AL3F1_ARATH2.273e-6146.22Aldehyde dehydrogenase family 3 member F1 OS=Arabi... [more]
AL3A2_RAT1.382e-5043.33Fatty aldehyde dehydrogenase OS=Rattus norvegicus ... [more]
AL3A2_MOUSE1.170e-4942.92Fatty aldehyde dehydrogenase OS=Mus musculus GN=Al... [more]
AL3A1_RAT5.806e-4942.73Aldehyde dehydrogenase, dimeric NADP-preferring OS... [more]
AL3A1_HUMAN1.095e-4742.73Aldehyde dehydrogenase, dimeric NADP-preferring OS... [more]
AL3A1_CANFA1.868e-4742.29Aldehyde dehydrogenase, dimeric NADP-preferring OS... [more]
AL3A1_MOUSE3.186e-4742.73Aldehyde dehydrogenase, dimeric NADP-preferring OS... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_025E12_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_025_T7_E12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV886848 ID=CV886848; Name=CV886848; organism=Citrus sinensis; type=EST; length=958bp
TTTTTTTTTTTTTTTTATTTTAACTGTACTCTCATATTTTGAAACCAATC
AAATCTTGTTCAAATAAAGTTGTACAGAGAAAGAGAAAGATACTCCAAAA
TGGTTTTGAGTACCTAAAATTACGAAGAAAAATACAGAAAAAATAACATA
AAGTCAAGACAGAAACATAGAGTTATCTCGTTTATGCCTTCGACCATCCC
AGAAGGGCACGTATTATGCCAAGTAGACTACCAGATATGAGAACTTTCAG
CAATCTTAGCTTGCCCTTTGTGTATGGCGGGTATCTCACAGGCACGTCAC
CAATAAAACCTCGAGATAGAACTGCTTTTTTATGACTGAAAACATCAAAA
GAGAATTTCCCATGGTATGCTCCCATCCCACTCTCCTGGACTCCCCCAAA
TGGCAGAGAATGAACAGCAAGATGTACAGCAGTGTCATTGATAACCAAAC
CCCCTGCAGAGACAGTTTCCACAAACTGCTGCTTGAGCTTCTTGTTGTTG
GTAAATAGATAAGCAGCAAGTGGCTTTGTTCCTGAATTTATAATATCAAA
GCTGTCCTCTATTTTGTCAACCGTAAGGATGGGAAGCAAAGGACCAAATA
TCTCTTCACTCATGATCAAAGAGTCTCGCGGGACATCTAATAAGAGGGTG
GGAGCAATCCTCAGTTTGTTTTTGTCCCTTTCGCCTCCATGAACAATCTT
TCCAGAAACCTTGTCATCATCTAGGAGTTTTGACAGGCGTGCGAAGTGGT
TGGAATTGACTATGCGGGACAAGTCTTTTGATTCCAATGGATTCTTCCCG
TAAAAATTCTCCAATTCATTTTTCAGAGACTCTAGCAGCTTTGGAGCATA
ATCTTTGGTCGTTATAATGTGATCAGGAGAAATGCATGCTTGTCCATTAT
TACAACCCCACTTGCCCATAATCATCCGCCTACAGGCAACTTTTAAATTG
ATGCCCGA
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