CV886833
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV886833 vs. ExPASy Swiss-Prot
Match: RHM1_ARATH (Probable rhamnose biosynthetic enzyme 1 OS=Arabidopsis thaliana GN=RHM1 PE=2 SV=1) HSP 1 Score: 447.973 bits (1151), Expect = 3.059e-125 Identity = 215/278 (77.34%), Postives = 238/278 (85.61%), Query Frame = 1 Query: 1 TDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKLKQLGWYERVTWEEGLQKTMKWYISNPDWWGDVSGALLPHPRTSMAPAIEGKVDGHDTTFMLKT--NNSSQSRMVVRASKSNSSRQKPFLKFLIYGRTGWIGGLLSKICEKKGIPFEYGK 828 TDEDA+VGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAM+G+ LPIHGDGSNVRSYLYCEDVAEAF+ +LHKGEVGHVYNIGTKKERRV DVA DICKLF+++P+ IKFV+NRPFNDQRYFLD QKLK+LGW ER TWEEGL+KTM WY NP+WWGDVSGALLPHPR M P DG + + T SQ+ MVV + +SN + QKP LKFLIYG+TGWIGGLL KIC+K+GI +EYGK Sbjct: 139 TDEDALVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGQVLPIHGDGSNVRSYLYCEDVAEAFEVVLHKGEVGHVYNIGTKKERRVNDVAKDICKLFNMDPEANIKFVDNRPFNDQRYFLDDQKLKKLGWSERTTWEEGLKKTMDWYTQNPEWWGDVSGALLPHPRMLMMPG-GRHFDGSEDNSLAATLSEKPSQTHMVVPSQRSNGTPQKPSLKFLIYGKTGWIGGLLGKICDKQGIAYEYGK 415
BLAST of CV886833 vs. ExPASy Swiss-Prot
Match: RHM3_ARATH (Probable rhamnose biosynthetic enzyme 3 OS=Arabidopsis thaliana GN=RHM3 PE=2 SV=1) HSP 1 Score: 436.417 bits (1121), Expect = 9.209e-122 Identity = 210/276 (76.09%), Postives = 233/276 (84.42%), Query Frame = 1 Query: 1 TDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKLKQLGWYERVTWEEGLQKTMKWYISNPDWWGDVSGALLPHPRTSMAPAIEGKVDGHDTTFMLKTNNSSQSRMVVRASKSNSSRQKPFLKFLIYGRTGWIGGLLSKICEKKGIPFEYGK 828 TDEDA VGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAM GKPLPIHGDGSNVRSYLYCEDVAEAF+ +LHKGEV HVYNIGT +ERRVIDVA DI KLF ++PD+ I++VENRPFNDQRYFLD QKLK+LGW ER WEEGL+KTM+WY NP+WWGDVSGALLPHPR M P + DG D K + +Q+ VV +K+ S K LKFLIYG+TGW+GGLL K+CEK+GIP+EYGK Sbjct: 139 TDEDASVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMNGKPLPIHGDGSNVRSYLYCEDVAEAFEVVLHKGEVNHVYNIGTTRERRVIDVANDISKLFGIDPDSTIQYVENRPFNDQRYFLDDQKLKKLGWCERTNWEEGLRKTMEWYTENPEWWGDVSGALLPHPRMLMMPG-DRHSDGSDEH---KNADGNQTFTVVTPTKAGCSGDKRSLKFLIYGKTGWLGGLLGKLCEKQGIPYEYGK 410
BLAST of CV886833 vs. ExPASy Swiss-Prot
Match: RHM2_ARATH (Probable rhamnose biosynthetic enzyme 2 OS=Arabidopsis thaliana GN=RHM2 PE=1 SV=1) HSP 1 Score: 433.721 bits (1114), Expect = 5.969e-121 Identity = 206/276 (74.64%), Postives = 233/276 (84.42%), Query Frame = 1 Query: 1 TDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGEVGHVYNIGTKKERRVIDVATDICKLFSLNPDTQIKFVENRPFNDQRYFLDVQKLKQLGWYERVTWEEGLQKTMKWYISNPDWWGDVSGALLPHPRTSMAPAIEGKVDGHDTTFMLKTNNSSQSRMVVRASKSNSSRQKPFLKFLIYGRTGWIGGLLSKICEKKGIPFEYGK 828 TDEDA VGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEK+IPKFILLAM GKPLPIHGDGSNVRSYLYCEDVAEAF+ +LHKGE+GHVYN+GTK+ERRVIDVA DICKLF +P++ I+FVENRPFNDQRYFLD QKLK+LGW ER WE+GL+KTM WY NP+WWGDVSGALLPHPR M P G++ + ++N+ Q+ VV K+ S K LKFLIYG+TGW+GGLL K+CEK+GI +EYGK Sbjct: 141 TDEDAAVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKMIPKFILLAMSGKPLPIHGDGSNVRSYLYCEDVAEAFEVVLHKGEIGHVYNVGTKRERRVIDVARDICKLFGKDPESSIQFVENRPFNDQRYFLDDQKLKKLGWQERTNWEDGLKKTMDWYTQNPEWWGDVSGALLPHPRMLMMPG--GRLSDGSSEKKDVSSNTVQTFTVV-TPKNGDSGDKASLKFLIYGKTGWLGGLLGKLCEKQGITYEYGK 413
BLAST of CV886833 vs. ExPASy Swiss-Prot
Match: TGDS_DICDI (dTDP-D-glucose 4,6-dehydratase OS=Dictyostelium discoideum GN=tgds PE=3 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 1.501e-47 Identity = 96/213 (45.07%), Postives = 129/213 (60.56%), Query Frame = 1 Query: 25 NHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGEVGHVYNIGTKKERRVIDVATDICKL-FSLNPDTQ--------------------------------IKFVENRPFNDQRYFLDVQKLKQLGWYERVTWEEGLQKTMKWYISNPDWW 564 ++E S L PTNPYSA+KAGAE LV +Y +S+ LPVI TR NN+YGP Q+PEK+IPKFI L + K IHG G N R+YLY +D+ AFD IL KGE+G+VYNIGT E +DVA I + +LN + I ++++RPFND RY ++ KL LGW + ++WEEG++KT WY +N ++W Sbjct: 157 SNEKSILNPTNPYSASKAGAEHLVQSYYKSFKLPVIITRANNIYGPKQYPEKIIPKFINLLLNNKKCTIHGTGKNTRNYLYIDDIVSAFDIILRKGEIGNVYNIGTDFEISNLDVAKKIINISINLNNNNNNNNNNNNNNNNNNNNNNNNNNNDFNIMDYKKFINYIDDRPFNDHRYNINYSKLSNLGWKKSISWEEGIEKTFIWYKNNRNYW 369
BLAST of CV886833 vs. ExPASy Swiss-Prot
Match: TGDS_HUMAN (dTDP-D-glucose 4,6-dehydratase OS=Homo sapiens GN=TGDS PE=1 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 2.243e-43 Identity = 86/194 (44.33%), Postives = 123/194 (63.40%), Query Frame = 1 Query: 31 EASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGEVGHVYNIGTKKERRVIDVATDICKLF-SLNPDTQ----IKFVENRPFNDQRYFLDVQKLKQLGWYERVTWEEGLQKTMKWYISNPDWWGDVSGALLPHP 597 E+S PTNPY+++KA AE V +Y Y PV+ TR +NVYGP+Q+PEK+IPKFI L + IHG G R++LY DV EAF T+L KG+ G +YNIGT E V+ +A ++ +L N +++ + +V +RP ND RY + +K+ LGW +V W+EG++KT++WY N W +V AL P P Sbjct: 156 ESSPKQPTNPYASSKAAAECFVQSYWEQYKFPVVITRSSNVYGPHQYPEKVIPKFISLLQHNRKCCIHGSGLQTRNFLYATDVVEAFLTVLKKGKPGEIYNIGTNFEMSVVQLAKELIQLIKETNSESEMENWVDYVNDRPTNDMRYPMKSEKIHGLGWRPKVPWKEGIKKTIEWYRENFHNWKNVEKALEPFP 349
BLAST of CV886833 vs. ExPASy Swiss-Prot
Match: TGDS_MOUSE (dTDP-D-glucose 4,6-dehydratase OS=Mus musculus GN=Tgds PE=2 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 2.930e-43 Identity = 85/194 (43.81%), Postives = 120/194 (61.86%), Query Frame = 1 Query: 31 EASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGEVGHVYNIGTKKERRVIDVATDICKLF-----SLNPDTQIKFVENRPFNDQRYFLDVQKLKQLGWYERVTWEEGLQKTMKWYISNPDWWGDVSGALLPHP 597 E+S PTNPY+++KA AE V +Y Y PV+ TR +NVYGP+Q+PE++IPKFI L + IHG G R++LY DV EAF T+L KGE G +YNIGT E V+ +A ++ +L ++ + +V +RP ND RY + +K+ LGW +V WEEG++KT++WY N W + AL P P Sbjct: 156 ESSPKQPTNPYASSKAAAECFVQSYWERYKFPVVITRSSNVYGPHQYPERVIPKFISLLQHNRKCCIHGSGLQRRNFLYAADVVEAFLTVLTKGEPGEIYNIGTNFEMSVVQLAKELIQLIKETNSESETESWVDYVSDRPHNDMRYPMKSEKIHSLGWKPKVPWEEGIKKTVEWYRKNFHNWKNAEKALEPFP 349
BLAST of CV886833 vs. ExPASy Swiss-Prot
Match: TGDS_BOVIN (dTDP-D-glucose 4,6-dehydratase OS=Bos taurus GN=TGDS PE=2 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 6.527e-43 Identity = 85/194 (43.81%), Postives = 123/194 (63.40%), Query Frame = 1 Query: 31 EASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGEVGHVYNIGTKKERRVIDVATDICKLF-SLNPDTQ----IKFVENRPFNDQRYFLDVQKLKQLGWYERVTWEEGLQKTMKWYISNPDWWGDVSGALLPHP 597 E+S PTNPY+++KA AE V +Y Y PV+ TR +NVYGP+Q+PEK+IPKFI L + IHG G R++LY DV EAF T+L KG+ G +YNIGT E V+ +A ++ +L N +++ + +V++RP ND RY + +K+ LGW +V W+EG++KT++WY N W + AL P P Sbjct: 156 ESSPKQPTNPYASSKAAAECFVQSYWEQYKFPVVITRSSNVYGPHQYPEKVIPKFISLLQHNRKCCIHGTGLQTRNFLYATDVVEAFLTVLKKGKPGEIYNIGTNFEMSVLQLAKELIQLIKETNSESEMENWVDYVDDRPTNDMRYPMKSEKIHGLGWRPKVPWKEGIKKTIEWYRENFHNWKNAEKALEPFP 349
BLAST of CV886833 vs. ExPASy Swiss-Prot
Match: RFBB_XANCP (dTDP-glucose 4,6-dehydratase OS=Xanthomonas campestris pv. campestris GN=rfbB PE=3 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 2.742e-41 Identity = 83/186 (44.62%), Postives = 118/186 (63.44%), Query Frame = 1 Query: 31 EASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGEVGHVYNIGTKKERRVIDVATDICKLFSLN--------PDTQIKFVENRPFNDQRYFLDVQKLK-QLGWYERVTWEEGLQKTMKWYISNPDW 561 E + P +PYSA+KA ++ LV A+ +YGLPV+TT +N YGP FPEKLIP I A+ G+PLP++GDG VR +L+ D EA T+L KG VG YN+G ER+ I+V IC L + ++QI +V +RP +D+RY +D KLK +LGW T+E+G+ +T+ WY++N W Sbjct: 148 ETTPYAPNSPYSASKAASDHLVRAFHHTYGLPVLTTNCSNNYGPYHFPEKLIPLVIAKALAGEPLPVYGDGKQVRDWLFVSDHCEAIRTVLAKGRVGETYNVGGNSERQNIEVVQAICALLDQHRPREDGKPRESQIAYVTDRPGHDRRYAIDASKLKDELGWEPAYTFEQGIAQTVDWYLTNQTW 333
BLAST of CV886833 vs. ExPASy Swiss-Prot
Match: RFBB_XANCB (dTDP-glucose 4,6-dehydratase OS=Xanthomonas campestris pv. campestris (strain B100) GN=rfbB PE=3 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 6.109e-41 Identity = 83/186 (44.62%), Postives = 117/186 (62.90%), Query Frame = 1 Query: 31 EASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGEVGHVYNIGTKKERRVIDVATDICKLFSLN--------PDTQIKFVENRPFNDQRYFLDVQKLK-QLGWYERVTWEEGLQKTMKWYISNPDW 561 E + P +PYSA+KA ++ LV A+ +YGLPV+TT +N YGP FPEKLIP I A+ G+PLP++GDG VR +L+ D EA T+L KG VG YN+G ER+ I+V IC L + ++QI +V +RP +D+RY +D KLK +LGW T+E+G+ T+ WY++N W Sbjct: 148 ETTPYAPNSPYSASKAASDHLVRAFHHTYGLPVLTTNCSNNYGPYHFPEKLIPLVIAKALAGEPLPVYGDGKQVRDWLFVSDHCEAIRTVLAKGRVGETYNVGGNSERQNIEVVQAICALLDQHRPREDGKPRESQIAYVTDRPGHDRRYAIDASKLKDELGWEPAYTFEQGIALTVDWYLTNQTW 333
BLAST of CV886833 vs. ExPASy Swiss-Prot
Match: RFBB_ECOLI (dTDP-glucose 4,6-dehydratase OS=Escherichia coli (strain K12) GN=rfbB PE=3 SV=2) HSP 1 Score: 167.162 bits (422), Expect = 1.042e-40 Identity = 87/192 (45.31%), Postives = 124/192 (64.58%), Query Frame = 1 Query: 31 EASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGKPLPIHGDGSNVRSYLYCEDVAEAFDTILHKGEVGHVYNIGTKKERRVIDVATDICKLF------SLNPDTQIKFVENRPFNDQRYFLDVQKL-KQLGWYERVTWEEGLQKTMKWYISNPDWWGDV-SGA 582 E + P++PYSA+KA ++ LV A+ R+YGLP I T +N YGP FPEKLIP IL A++GK LPI+G G +R +LY ED A A T++ +G+ G YNIG E++ IDV IC L + QI +V +RP +D+RY +D +K+ + LGW + T+E G++KT++WY+SN W +V SGA Sbjct: 157 ETTAYAPSSPYSASKASSDHLVRAWKRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKALPIYGKGDQIRDWLYVEDHARALYTVVTEGKAGETYNIGGHNEKKNIDVVLTICDLLDEIVPKEKSYREQITYVADRPGHDRRYAIDAEKIGRALGWKPQETFESGIRKTVEWYLSNTKWVDNVKSGA 348 The following BLAST results are available for this feature:
BLAST of CV886833 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 38
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CV886833 ID=CV886833; Name=CV886833; organism=Citrus sinensis; type=EST; length=828bpback to top |