CV886828
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV886828 vs. ExPASy Swiss-Prot
Match: CTDSL_CHICK (CTD small phosphatase-like protein OS=Gallus gallus GN=NFI1 PE=2 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 1.011e-15 Identity = 46/106 (43.40%), Postives = 67/106 (63.21%), Query Frame = 3 Query: 510 ECDGKPKINYVTVFERPGLHEFLKKLAEFADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPSTVSTEYREHVKDLSCLSKDLCRVVLVDNNPFSFLLQPLNGIP 827 E DG I+ V V +RP + EFL+++ E + VLFTA L YA P+ D +DR +F RL+R S V +VKDLS L ++L +V++VDN+P S++ P N +P Sbjct: 134 EIDGT--IHQVYVLKRPHVDEFLQRMGELFECVLFTASLAKYADPVADLLDRWGVFRARLFRESCV-FHRGNYVKDLSRLGRELSKVIIVDNSPASYIFHPENAVP 236
BLAST of CV886828 vs. ExPASy Swiss-Prot
Match: CTDSL_MOUSE (CTD small phosphatase-like protein OS=Mus musculus GN=Ctdspl PE=2 SV=2) HSP 1 Score: 83.1889 bits (204), Expect = 2.252e-15 Identity = 45/106 (42.45%), Postives = 67/106 (63.21%), Query Frame = 3 Query: 510 ECDGKPKINYVTVFERPGLHEFLKKLAEFADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPSTVSTEYREHVKDLSCLSKDLCRVVLVDNNPFSFLLQPLNGIP 827 E DG I+ V V +RP + EFL+++ + + VLFTA L YA P+ D +DR +F RL+R S V +VKDLS L ++L +V++VDN+P S++ P N +P Sbjct: 135 EIDGT--IHQVYVLKRPHVDEFLQRMGQLFECVLFTASLAKYADPVADLLDRWGVFRARLFRESCV-FHRGNYVKDLSRLGRELSKVIIVDNSPASYIFHPENAVP 237
BLAST of CV886828 vs. ExPASy Swiss-Prot
Match: CTDSL_HUMAN (CTD small phosphatase-like protein OS=Homo sapiens GN=CTDSPL PE=1 SV=2) HSP 1 Score: 83.1889 bits (204), Expect = 2.252e-15 Identity = 45/106 (42.45%), Postives = 67/106 (63.21%), Query Frame = 3 Query: 510 ECDGKPKINYVTVFERPGLHEFLKKLAEFADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPSTVSTEYREHVKDLSCLSKDLCRVVLVDNNPFSFLLQPLNGIP 827 E DG I+ V V +RP + EFL+++ + + VLFTA L YA P+ D +DR +F RL+R S V +VKDLS L ++L +V++VDN+P S++ P N +P Sbjct: 135 EIDGT--IHQVYVLKRPHVDEFLQRMGQLFECVLFTASLAKYADPVADLLDRWGVFRARLFRESCV-FHRGNYVKDLSRLGRELSKVIIVDNSPASYIFHPENAVP 237
BLAST of CV886828 vs. ExPASy Swiss-Prot
Match: CTDS1_MOUSE (Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1 OS=Mus musculus GN=Ctdsp1 PE=1 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 1.118e-14 Identity = 45/106 (42.45%), Postives = 66/106 (62.26%), Query Frame = 3 Query: 510 ECDGKPKINYVTVFERPGLHEFLKKLAEFADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPSTVSTEYREHVKDLSCLSKDLCRVVLVDNNPFSFLLQPLNGIP 827 E DG ++ V V +RP + EFL+++ E + VLFTA L YA P+ D +D+ F RL+R S V +VKDLS L +DL RV+++DN+P S++ P N +P Sbjct: 119 EIDGV--VHQVYVLKRPHVDEFLQRMGELFECVLFTASLAKYADPVADLLDKWGAFRARLFRESCV-FHRGNYVKDLSRLGRDLRRVLILDNSPASYVFHPDNAVP 221
BLAST of CV886828 vs. ExPASy Swiss-Prot
Match: CTDS1_HUMAN (Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1 OS=Homo sapiens GN=CTDSP1 PE=1 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 1.118e-14 Identity = 45/106 (42.45%), Postives = 66/106 (62.26%), Query Frame = 3 Query: 510 ECDGKPKINYVTVFERPGLHEFLKKLAEFADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPSTVSTEYREHVKDLSCLSKDLCRVVLVDNNPFSFLLQPLNGIP 827 E DG ++ V V +RP + EFL+++ E + VLFTA L YA P+ D +D+ F RL+R S V +VKDLS L +DL RV+++DN+P S++ P N +P Sbjct: 119 EIDGV--VHQVYVLKRPHVDEFLQRMGELFECVLFTASLAKYADPVADLLDKWGAFRARLFRESCV-FHRGNYVKDLSRLGRDLRRVLILDNSPASYVFHPDNAVP 221
BLAST of CV886828 vs. ExPASy Swiss-Prot
Match: CTDS2_MOUSE (Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 2 OS=Mus musculus GN=Ctdsp2 PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 7.245e-14 Identity = 41/96 (42.71%), Postives = 62/96 (64.58%), Query Frame = 3 Query: 540 VTVFERPGLHEFLKKLAEFADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPSTVSTEYREHVKDLSCLSKDLCRVVLVDNNPFSFLLQPLNGIP 827 V V +RP + EFL+++ E + VLFTA L YA P+ D +DR +F RL+R + V + +VKDLS L +DL + V++DN+P S++ P N +P Sbjct: 137 VYVLKRPYVDEFLRRMGELFECVLFTASLAKYADPVTDLLDRCGVFRARLFREACVFHQ-GCYVKDLSRLGRDLRKTVILDNSPASYIFHPENAVP 231
BLAST of CV886828 vs. ExPASy Swiss-Prot
Match: CTDS2_HUMAN (Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 2 OS=Homo sapiens GN=CTDSP2 PE=1 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 7.245e-14 Identity = 41/96 (42.71%), Postives = 62/96 (64.58%), Query Frame = 3 Query: 540 VTVFERPGLHEFLKKLAEFADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPSTVSTEYREHVKDLSCLSKDLCRVVLVDNNPFSFLLQPLNGIP 827 V V +RP + EFL+++ E + VLFTA L YA P+ D +DR +F RL+R S V + +VKDLS L +DL + +++DN+P S++ P N +P Sbjct: 138 VYVLKRPYVDEFLRRMGELFECVLFTASLAKYADPVTDLLDRCGVFRARLFRESCVFHQ-GCYVKDLSRLGRDLRKTLILDNSPASYIFHPENAVP 232
BLAST of CV886828 vs. ExPASy Swiss-Prot
Match: CTSL2_DICDI (CTD small phosphatase-like protein 2 OS=Dictyostelium discoideum GN=ctdspl2 PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.753e-13 Identity = 41/92 (44.57%), Postives = 59/92 (64.13%), Query Frame = 3 Query: 552 ERPGLHEFLKKLAEFADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPSTVSTEYREHVKDLSCLSKDLCRVVLVDNNPFSFLLQPLNGIP 827 +RP EFL K+++ ++++FTA E YA L++ ID N RLYR S V + ++KDLS L +DL +VV++DN+P SF Q NGIP Sbjct: 431 KRPFFEEFLHKVSDIFEVIIFTASQEVYANKLLNMIDPNNKIKYRLYRDSCVYVD-GNYLKDLSVLGRDLKQVVIIDNSPQSFGFQVDNGIP 521
BLAST of CV886828 vs. ExPASy Swiss-Prot
Match: YA22_SCHPO (Uncharacterized protein C2F7.02c OS=Schizosaccharomyces pombe GN=SPAC2F7.02c PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 4.696e-13 Identity = 37/96 (38.54%), Postives = 62/96 (64.58%), Query Frame = 3 Query: 540 VTVFERPGLHEFLKKLAEFADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPSTVSTEYREHVKDLSCLSKDLCRVVLVDNNPFSFLLQPLNGIP 827 V V +RPG+ EFLKK+ + ++V+FTA L YA P++D +D ++ RL+R + + E VKDLS L ++L +++DN+P S++ P + +P Sbjct: 194 VRVVKRPGVDEFLKKMGDMFEIVVFTASLAKYADPVLDMLDHSHVIRHRLFREACCNYE-GNFVKDLSQLGRNLEDSIIIDNSPSSYIFHPSHAVP 288
BLAST of CV886828 vs. ExPASy Swiss-Prot
Match: CTDS_DICDI (Probable C-terminal domain small phosphatase OS=Dictyostelium discoideum GN=fcpA PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 6.133e-13 Identity = 41/99 (41.41%), Postives = 61/99 (61.62%), Query Frame = 3 Query: 531 INYVTVFERPGLHEFLKKLAEFADLVLFTAGLEGYARPLVDKIDRENLFSLRLYRPSTVSTEYREHVKDLSCLSKDLCRVVLVDNNPFSFLLQPLNGIP 827 I+ V V +RP + +FL+ +AE ++V+FTA L YA P++D +D + RL+R S +VKDLS L +DL ++VDN+P S+L P N IP Sbjct: 170 IHQVYVVKRPFVDDFLRAIAEKFEIVVFTASLAKYADPVLDFLDTGRVIHYRLFRES-CHNHKGNYVKDLSRLGRDLKSTIIVDNSPSSYLFHPENAIP 267 The following BLAST results are available for this feature:
BLAST of CV886828 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
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Sequences
The
following sequences are available for this feature:
EST sequence >CV886828 ID=CV886828; Name=CV886828; organism=Citrus sinensis; type=EST; length=904bpback to top |