EG026652

Overview
NameEG026652
Unique NameEG026652
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length408
Libraries
Library NameType
AbsCFruitcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2614 contig Csv1_Contig2614:249..657. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EG026652 vs. ExPASy Swiss-Prot
Match: MT3_CARPA (Metallothionein-like protein type 3 OS=Carica papaya PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.914e-14
Identity = 33/52 (63.46%), Postives = 40/52 (76.92%), Query Frame = 1 
Query:    1 QCVKNGSSYAADFVETDLSFVSTVVVMDVQAAETEGNCKCGPTCACVNCTCG 156
            QCVK GSSY AD +ET+ S ++  VVMD  AAE +G CKCGP+C+C NCTCG
Sbjct:   15 QCVKKGSSYTADIIETEKSIMT--VVMDAPAAENDGKCKCGPSCSCTNCTCG 64
[Close]
BLAST of EG026652 vs. ExPASy Swiss-Prot
Match: MT3_MUSAC (Metallothionein-like protein type 3 OS=Musa acuminata PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 1.981e-11
Identity = 29/53 (54.72%), Postives = 37/53 (69.81%), Query Frame = 1 
Query:    1 QCVKNGSSYAADFVETDLSFVSTVVVMDVQAAETEGNCKCGPTCACVNCTCGS 159
            QCVK G+SY  D VET+ S+V  V+V   +AAE +G CKCG  CAC +C CG+
Sbjct:   14 QCVKKGNSYGIDIVETEKSYVDEVIVA-AEAAEHDGKCKCGAACACTDCKCGN 65
The following BLAST results are available for this feature:
BLAST of EG026652 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
MT3_CARPA1.914e-1463.46Metallothionein-like protein type 3 OS=Carica papa... [more]
MT3_MUSAC1.981e-1154.72Metallothionein-like protein type 3 OS=Musa acumin... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAK2BE09FM1 AbsCFruit Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG026652 ID=EG026652; Name=EG026652; organism=Citrus sinensis; type=EST; length=408bp
CAGTGTGTGAAGAATGGAAGCAGCTATGCTGCTGACTTCGTCGAGACTGA
CTTGAGCTTTGTCAGCACCGTTGTTGTCATGGACGTTCAGGCTGCTGAGA
CTGAAGGTAACTGCAAGTGCGGCCCCACCTGCGCTTGTGTGAACTGCACT
TGTGGTAGTCACTAATAAGCAAACTCATGCAGCAAAAAATAAGAAGCTGC
AAGTGTGCCTAAATATTGTGGGGGTTAAGAATAATGTAAGGGTGATTAAA
AAAAAAGAAAAATTCTCTACTTCGTTTTTATGATGGTCTACTACTAGTGT
GTGGAGTGATGTGCGTGTTGTGTCACCCATCACTCGTAATGTTTTGTGTT
TCCTTCTTCATAATCATGTAATATATGGCCATGGCCATGACCGTGGCCTT
GTGTGGTT
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