CV886803

Overview
NameCV886803
Unique NameCV886803
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length834
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV886803 vs. ExPASy Swiss-Prot
Match: PME1_FICAW (Pectinesterase/pectinesterase inhibitor OS=Ficus awkeotsang PE=1 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 1.414e-45
Identity = 104/234 (44.44%), Postives = 143/234 (61.11%), Query Frame = 3
Query:  150 HQFCAKAQDQSSCIAMVSETTSINATTKMNEVDLLLIFLSKSTSNIQETIEVANHVKHRINSPRGQAALTDCVELLELSVDRITDSMAAL--KKRRTSSNEDAHAWLSGVLTNHVTCLDGLDGSAT----KLMEPRLVELMARAANSLAILVAISPYNTNVIQQYYLRKEIQFPSWVTSRDRLLLRPSQXXXXXXXXXXXXDGSGNYKTVKEAVASAPDNSQTRYVIYVKKGTY 833
            H+ C ++ ++ SC+AM+SE T +N     N   LL  FL K+T  IQ+  E AN    RIN+P+ + AL DC EL++LS +R+ DS++ L  +   T S+ED H WLSGVLTNHVTCLDGL+  +T     LME  L EL+ RA  SLAI V + P  +NVI+         FP+WVT+ DR LL+ +             DGSG+Y+T+ EAVA+ PDNS+ R ++ V+ G Y
Sbjct:   45 HKICDQSVNKESCLAMISEVTGLNMADHRN---LLKSFLEKTTPRIQKAFETANDASRRINNPQERTALLDCAELMDLSKERVVDSISILFHQNLTTRSHEDLHVWLSGVLTNHVTCLDGLEEGSTDYIKTLMESHLNELILRARTSLAIFVTLFPAKSNVIEPV----TGNFPTWVTAGDRRLLQ-TLGKDIEPDIVVAKDGSGDYETLNEAVAAIPDNSKKRVIVLVRTGIY 270          
BLAST of CV886803 vs. ExPASy Swiss-Prot
Match: PME21_SOLLC (Pectinesterase 2.1 OS=Solanum lycopersicum GN=PME2.1 PE=2 SV=2)

HSP 1 Score: 173.326 bits (438), Expect = 1.463e-42
Identity = 106/229 (46.29%), Postives = 142/229 (62.01%), Query Frame = 3
Query:  159 CAKAQDQSSCIAMVSETTSINATTKMNE-VDLLLIFLSKSTSNIQETIEVANHVKHRINSPRGQAALTDCVELLELSVDRITDSMAALKKRRTSSNEDAHAWLSGVLTNHVTCLDGLDGSATKLM--EPRLVELMARAANSLAILVAISPYNTNVIQQYYLRKEI-QFPSWVTSRDRLLLRPSQXXXXXXXXXXXXDGSGNYKTVKEAVASAPDNSQTRYVIYVKKGTY 833
            C  AQD   C++ VS+  S    T  ++ + +L  FL  S   +   I V   +K++IN  R Q ALTDC+ELL+LSVD + DS+AA+ KR  S + +A +WLSGVLTNHVTCLD LD S TK M     L EL++RA  +LA+L +++  N  V     LR  + + PSWV+SRDR L+  S             DG+G Y+T+ EAVA+APD S+TRYVIYVK+GTY
Sbjct:   54 CKTAQDSQLCLSYVSDLISNEIVTSDSDGLSILKKFLVYSVHQMNNAIPVVRKIKNQINDIREQGALTDCLELLDLSVDLVCDSIAAIDKRSRSEHANAQSWLSGVLTNHVTCLDELD-SFTKAMINGTNLDELISRAKVALAMLASVTTPNDEV-----LRPGLGKMPSWVSSRDRKLME-SSGKDIGANAVVAKDGTGKYRTLAEAVAAAPDKSKTRYVIYVKRGTY 275          
BLAST of CV886803 vs. ExPASy Swiss-Prot
Match: PME22_SOLLC (Pectinesterase 2.2 OS=Solanum lycopersicum GN=PME2.2 PE=3 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 2.759e-41
Identity = 103/229 (44.98%), Postives = 143/229 (62.45%), Query Frame = 3
Query:  159 CAKAQDQSSCIAMVSETTSIN-ATTKMNEVDLLLIFLSKSTSNIQETIEVANHVKHRINSPRGQAALTDCVELLELSVDRITDSMAALKKRRTSSNEDAHAWLSGVLTNHVTCLDGLDGSATKLM--EPRLVELMARAANSLAILVAISPYNTNVIQQYYLRKEI-QFPSWVTSRDRLLLRPSQXXXXXXXXXXXXDGSGNYKTVKEAVASAPDNSQTRYVIYVKKGTY 833
            C  AQD   C++ VS+  S    TT  + + +L+ FL      +   I V + +K++IN  R + ALTDC+ELL+ SVD ++DS+AA+ KR  S + +A +WLSGVLTNHVTCLD LD S TK M     L EL++RA  +LA+L +++  N +V     LR  + + PSWV+SRDR L+  S             DG+G Y+T+ EAVA+APD S+TRYVIYVK+G Y
Sbjct:   54 CKTAQDSQLCLSYVSDLMSNEIVTTDSDGLSILMKFLVNYVHQMNNAIPVVSKMKNQINDIRQEGALTDCLELLDQSVDLVSDSIAAIDKRTHSEHANAQSWLSGVLTNHVTCLDELD-SFTKAMINGTNLDELISRAKVALAMLASVTTPNDDV-----LRPGLGKMPSWVSSRDRKLME-SSGKDIGANAVVAKDGTGKYRTLAEAVAAAPDKSKTRYVIYVKRGIY 275          
BLAST of CV886803 vs. ExPASy Swiss-Prot
Match: PME18_ARATH (Pectinesterase/pectinesterase inhibitor 18 OS=Arabidopsis thaliana GN=PME18 PE=1 SV=2)

HSP 1 Score: 167.162 bits (422), Expect = 1.049e-40
Identity = 106/286 (37.06%), Postives = 157/286 (54.90%), Query Frame = 3
Query:    3 PLLLKLHTPKASKRKXXXXXXXXXXXMCSATFVAIHCIKAINSNNHWSL---HQFCAKAQDQSSCIAMVSETTSINATTKMNEVDLLLIFLSKSTSNIQETIEVANHVKHRINSPRGQAALTDCVELLELSVDRITDSMAALK--KRRTSSNEDAHAWLSGVLTNHVTCLDGLDG---SATKLMEPRLVELMARAANSLAILVAISPYNTNVIQQYYLRKEIQFPSWVTSRDRLLLRPS-QXXXXXXXXXXXXDGSGNYKTVKEAVASAPDNSQTRYVIYVKKGTY 833
            PLL K   PK  K K           + S  F     I    +NN  SL    Q C  A DQ SC A++SE T+++ + K+N +DLL +FL  S   ++ T+ + +  + R N  R +A   DC E++++S DR+  SM  L+       S  + H WLS VLTN++TCL+ +     ++ ++++P+L +L++RA  +LAI V++ P   ++      R    FPSW+T+ DR LL  S +            DG+G +KTV EAVA+AP+NS TRYVIYVKKG Y
Sbjct:    7 PLLSK---PKYLKHKNLCLVLSFVAILGSVAFFTAQLISVNTNNNDDSLLTTSQICHGAHDQDSCQALLSEFTTLSLS-KLNRLDLLHVFLKNSVWRLESTMTMVSEARIRSNGVRDKAGFADCEEMMDVSKDRMMSSMEELRGGNYNLESYSNVHTWLSSVLTNYMTCLESISDVSVNSKQIVKPQLEDLVSRARVALAIFVSVLPARDDLKMIISNR----FPSWLTALDRKLLESSPKTLKVTANVVVAKDGTGKFKTVNEAVAAAPENSNTRYVIYVKKGVY 284          
BLAST of CV886803 vs. ExPASy Swiss-Prot
Match: PME3_SOLLC (Pectinesterase 3 OS=Solanum lycopersicum GN=PME3 PE=3 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 6.796e-40
Identity = 97/226 (42.92%), Postives = 136/226 (60.18%), Query Frame = 3
Query:  159 CAKAQDQSSCIAMVSETTSINATTKMNEVDLLLIFLSKSTSNIQETIEVANHVKHRINSPRGQAALTDCVELLELSVDRITDSMAALKKRRTSSNEDAHAWLSGVLTNHVTCLDGLDGSATKLMEPRLV-ELMARAANSLAILVAISPYNTNVIQQYYLRKEIQFPSWVTSRDRLLLRPSQXXXXXXXXXXXXDGSGNYKTVKEAVASAPDNSQTRYVIYVKKGTY 833
            C  AQD   C++ VSE      TT+ + V +L  FL K    +   I V   +K++IN  R Q ALTDC+ELL+ SVD ++DS+AA+ KR  S + +A +WLSGVLTNHVTCLD L   +       ++ EL+ RA  +LA+L +++  N  V++Q   +     P WV+SRDR L+  S             DG+G+Y+T+ EAVA+APD ++TRYVIYVK G Y
Sbjct:   54 CKTAQDSQLCLSYVSEIV----TTESDGVTVLKKFLVKYVHQMNNAIPVVRKIKNQINDIRQQGALTDCLELLDQSVDLVSDSIAAIDKRSRSEHANAQSWLSGVLTNHVTCLDELTSFSLSTKNGTVLDELITRAKVALAMLASVTTPNDEVLRQGLGK----MPYWVSSRDRKLME-SSGKDIIANRVVAQDGTGDYQTLAEAVAAAPDKNKTRYVIYVKMGIY 270          
BLAST of CV886803 vs. ExPASy Swiss-Prot
Match: PME1_SOLLC (Pectinesterase 1 OS=Solanum lycopersicum GN=PME1.9 PE=1 SV=5)

HSP 1 Score: 164.466 bits (415), Expect = 6.796e-40
Identity = 100/228 (43.86%), Postives = 140/228 (61.40%), Query Frame = 3
Query:  159 CAKAQDQSSCIAMVSETTSIN-ATTKMNEVDLLLIFLSKSTSNIQETIEVANHVKHRINSPRGQAALTDCVELLELSVDRITDSMAALKKRRTSSNEDAHAWLSGVLTNHVTCLDGLDGSATKLM--EPRLVELMARAANSLAILVAISPYNTNVIQQYYLRKEIQFPSWVTSRDRLLLRPSQXXXXXXXXXXXXDGSGNYKTVKEAVASAPDNSQTRYVIYVKKGTY 833
            C  AQD   C++ VS+  S    TT+ +   +L+ FL      +   I V   +K++IN  R   ALTDC+ELL+ SVD  +DS+AA+ KR  S + +A +WLSGVLTNHVTCLD LD S TK M     L EL++RA  +LA+L +++  + +V    ++    + PSWV+S DR L+  S             DG+G+Y+T+ EAVA+APD S+TRYVIYVK+GTY
Sbjct:   50 CKTAQDSQLCLSYVSDLISNEIVTTESDGHSILMKFLVNYVHQMNNAIPVVRKMKNQINDIRQHGALTDCLELLDQSVDFASDSIAAIDKRSRSEHANAQSWLSGVLTNHVTCLDELD-SFTKAMINGTNLEELISRAKVALAMLASLTTQDEDV----FMTVLGKMPSWVSSMDRKLME-SSGKDIIANAVVAQDGTGDYQTLAEAVAAAPDKSKTRYVIYVKRGTY 271          
BLAST of CV886803 vs. ExPASy Swiss-Prot
Match: PME42_ARATH (Probable pectinesterase/pectinesterase inhibitor 42 OS=Arabidopsis thaliana GN=PME42 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 7.812e-20
Identity = 69/231 (29.87%), Postives = 117/231 (50.65%), Query Frame = 3
Query:  174 DQSSCIAMVSET-TSINATTKMNEVDLLLIFLSKSTSNIQET-IEVANHVKHRINSPRGQAALTDCV----ELLELSVDRITDSMAALKKRR---TSSNEDAHAWLSGVLTNHVTCLDGL-DGSATKLMEPRLVELMARAANSLAILVAISPYNTNVIQQYYLRKEIQFPSWVTSRDRL-LLRPSQXXXXXXXXXXXXDGSGNYKTVKEAVASAPDNSQTRYVIYVKKGTY 833
            D+ SC   + E  T+ ++ +++   DLL+I L  S   I    I V    K        +  L +      E++E + DR+  S+  L         S E+ H WLSGVLT+++TC+D + DG+  + +EP+L +L+++A  +LA+ ++ISP +   +           PSW++  D+  L   ++            DG+G Y TV  A+A+AP +S  R++IY+K G Y
Sbjct:   27 DKHSCQNFLLELKTASSSLSEIRRRDLLIIVLKNSVRKIDMAMIGVMEDTKQHEEMENDKLCLKEDTNLFEEMMESAKDRMIRSVEELLGGEFPYLGSYENIHTWLSGVLTSYITCIDEIGDGAYKRRVEPQLQDLISKAKVALALFISISPRDNTELNSVVPNS----PSWLSHVDKKDLYLNAEALKKIADVVVAKDGTGKYNTVNAAIAAAPQHSHKRFIIYIKTGIY 253          
BLAST of CV886803 vs. ExPASy Swiss-Prot
Match: PME19_ARATH (Probable pectinesterase/pectinesterase inhibitor 19 OS=Arabidopsis thaliana GN=PME19 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.473e-18
Identity = 71/232 (30.60%), Postives = 119/232 (51.29%), Query Frame = 3
Query:  174 DQSSCIAMVSETTSINAT-TKMNEVDLLLIFLSKSTSNIQET-IEVANHVKHRINSPRGQAALTDCV----ELLELSVDRITDSMAAL---KKRRTSSNEDAHAWLSGVLTNHVTCLDGL-DGSATKLMEPRLVELMARAANSLAILVAISPY-NTNVIQQYYLRKEIQFPSWVTSRDRL-LLRPSQXXXXXXXXXXXXDGSGNYKTVKEAVASAPDNSQTRYVIYVKKGTY 833
            D+ SC   + E  + +++ +++   DLL+I L  S   I    I V +  K           + +      E++E + DR+  S+  L   +     S E+ H WLS VLT+++TC+D + +G+  + +EP+L +L++RA  +LA+ ++ISP  NT +I           PSW+   D+  L   ++            DG+G Y TV  A+A+AP +SQ R+VIY+K G Y
Sbjct:   27 DKQSCQNFLLELKAGSSSLSEIRRRDLLIIVLKNSVRRIDMVMIGVMDDTKQHEEMENDLLGVKEDTKLFEEMMESTKDRMIRSVEELLGGEFPNRGSYENVHTWLSSVLTSYITCIDEIGEGAYKRRVEPKLEDLISRARIALALFISISPRDNTELISVIP-----NSPSWLFHVDKKDLYLNAEALKKIADVVVAKDGTGKYSTVNAAIAAAPQHSQKRFVIYIKTGIY 253          
BLAST of CV886803 vs. ExPASy Swiss-Prot
Match: PME1_ARATH (Pectinesterase 1 OS=Arabidopsis thaliana GN=PME1 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 9.550e-18
Identity = 76/256 (29.69%), Postives = 117/256 (45.70%), Query Frame = 3
Query:  144 SLHQFCAKAQDQSSCIAMVSETTSINATTKMNEVDLLLIFLSKSTSNIQETIEVANHVKHRINSPRGQAALTDCVELLELSVDRITDSMAAL----KKRRTSSN--EDAHAWLSGVLTNHVTCLDGLDGS-------ATKLMEPRLVELMARA----ANSLAIL---------VAISPYNTNVIQQYYLRKEIQFPSWVTSRDRLLLRPSQXXXXXXXXXXXXDGSGNYKTVKEAVASAPDNSQTRYVIYVKKGTY 833
            SL   C+  +   SCI+ +S+  S N T       L L  +     +I +  E    +       R ++AL  C +L+E ++DR+ D+++A+    KK+  SS+  ED   WLS  +T+H TC D LD         A   +   L   M+R+    +NSLAI+         + I  +    +  ++ ++ + F  W  +R RLL    Q            DG+G+  TV EAVA  P  S   +VIYVK GTY
Sbjct:   72 SLKAICSVTRFPESCISSISKLPSSNTTDPETLFKLSLKVIIDELDSISDLPE---KLSKETEDERIKSALRVCGDLIEDALDRLNDTVSAIDDEEKKKTLSSSKIEDLKTWLSATVTDHETCFDSLDELKQNKTEYANSTITQNLKSAMSRSTEFTSNSLAIVSKILSALSDLGIPIHRRRRLMSHHHQQSVDFEKW--ARRRLL----QTAGLKPDVTVAGDGTGDVLTVNEAVAKVPKKSLKMFVIYVKSGTY 318          
BLAST of CV886803 vs. ExPASy Swiss-Prot
Match: PME_PRUPE (Pectinesterase/pectinesterase inhibitor PPE8B OS=Prunus persica PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.779e-17
Identity = 63/198 (31.82%), Postives = 96/198 (48.48%), Query Frame = 3
Query:  264 LSKSTSNIQETIEVANHVKHRINSPRGQAALTDCVELLELSVDRITDSMAALKKRRTSSNE------DAHAWLSGVLTNHVTCLDGLDGSATKLMEPRLVELMARAANSLA--ILVAISPYNTNVIQQYYLRKEIQFPSWVTSRDRLLLRPSQXXXXXXXXXXXXDGSGNYKTVKEAVASAPDNSQTRYVIYVKKGTY 833
            L  +   +Q+   + +   +     R   A++DC++LL+ S D +  S++A + ++  +N       D   WLS  L N  TC +G +G  T  +   L+        SL   +L  + P N+N  QQ       Q PSWV ++DR LL   Q            DG+GN+  V +AV +APD S  RYVIY+K+GTY
Sbjct:   60 LKDTIDAVQQVASILSQFANAFGDFRLANAISDCLDLLDFSADELNWSLSASQNQKGKNNSTGKLSSDLRTWLSAALVNQDTCSNGFEG--TNSIVQGLISAGLGQVTSLVQELLTQVHP-NSN--QQ---GPNGQIPSWVKTKDRKLL---QADGVSVDAIVAQDGTGNFTNVTDAVLAAPDYSMRRYVIYIKRGTY 246          
The following BLAST results are available for this feature:
BLAST of CV886803 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
PME1_FICAW1.414e-4544.44Pectinesterase/pectinesterase inhibitor OS=Ficus a... [more]
PME21_SOLLC1.463e-4246.29Pectinesterase 2.1 OS=Solanum lycopersicum GN=PME2... [more]
PME22_SOLLC2.759e-4144.98Pectinesterase 2.2 OS=Solanum lycopersicum GN=PME2... [more]
PME18_ARATH1.049e-4037.06Pectinesterase/pectinesterase inhibitor 18 OS=Arab... [more]
PME3_SOLLC6.796e-4042.92Pectinesterase 3 OS=Solanum lycopersicum GN=PME3 P... [more]
PME1_SOLLC6.796e-4043.86Pectinesterase 1 OS=Solanum lycopersicum GN=PME1.9... [more]
PME42_ARATH7.812e-2029.87Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME19_ARATH1.473e-1830.60Probable pectinesterase/pectinesterase inhibitor 1... [more]
PME1_ARATH9.550e-1829.69Pectinesterase 1 OS=Arabidopsis thaliana GN=PME1 P... [more]
PME_PRUPE2.779e-1731.82Pectinesterase/pectinesterase inhibitor PPE8B OS=P... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_025C09_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_025_T7_C09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV886803 ID=CV886803; Name=CV886803; organism=Citrus sinensis; type=EST; length=834bp
GGCCTCTGCTACTAAAGCTACACACGCCAAAAGCCTCTAAACGTAAAATT
CTCCTTCTAATTCTGTCCGTGGTTTCCGTGATGTGCTCGGCTACATTTGT
TGCCATACACTGTATCAAAGCTATCAACTCAAACAATCATTGGTCACTGC
ATCAATTTTGTGCTAAAGCCCAGGACCAGTCATCGTGCATAGCCATGGTT
TCAGAAACAACCTCAATTAATGCAACCACAAAAATGAACGAGGTTGATCT
GTTACTTATCTTCTTGAGCAAGTCCACATCAAACATACAAGAAACTATCG
AGGTGGCCAATCACGTCAAGCATCGGATCAACAGCCCTAGAGGACAAGCG
GCTTTGACTGATTGTGTGGAGTTGTTGGAGTTATCCGTCGATAGAATTAC
AGATTCCATGGCGGCTCTTAAAAAAAGGAGGACCAGTTCCAACGAAGATG
CGCATGCATGGCTAAGTGGCGTTCTTACTAACCACGTCACGTGCTTGGAC
GGCCTAGATGGCTCAGCTACGAAGTTGATGGAGCCAAGGCTCGTTGAGTT
GATGGCAAGAGCTGCAAATTCTCTAGCCATTTTAGTGGCAATTTCCCCAT
ACAACACCAACGTCATCCAGCAATATTACTTGAGAAAAGAAATTCAATTT
CCGTCGTGGGTGACAAGCAGGGACCGGTTGCTTTTACGGCCTTCTCAGGC
CGAAGCAGCTAAGGCCAACGTTGTGGTGGCTAAGGATGGAAGTGGAAACT
ATAAGACTGTGAAAGAGGCCGTGGCATCAGCACCAGACAACAGCCAGACA
AGGTACGTTATTTATGTGAAGAAAGGAACGTACA
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