CV886750
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV886750 vs. ExPASy Swiss-Prot
Match: PFD2_ARATH (Probable prefoldin subunit 2 OS=Arabidopsis thaliana GN=At3g22480 PE=2 SV=1) HSP 1 Score: 193.356 bits (490), Expect = 1.067e-48 Identity = 98/139 (70.50%), Postives = 117/139 (84.17%), Query Frame = -3 Query: 141 REPVNEQIVANMYTSMRSELNQIYSKITELEMEASEHSLVINAIKPLDPSRKCYRMIGGVPVERTISEVLPAVQRNKEGIEEVIARLNEALAAKKKEISDFEAKYKIRIRKPESESKDDGNRKEGSAQGVLVGPAGSSE 557 REP NEQ V NMY RSEL+QIYS IT+LEM+ SEHSLVINAI+PLD SRKC+RMIGGV VERTI EVLPAVQRNK+G+EEV+ +L E L KKK++++FEAKYKIRI K E ++K+ GN+KEG+AQGVLVG A SS+ Sbjct: 11 REPPNEQAVLNMYEGKRSELSQIYSNITDLEMQVSEHSLVINAIQPLDQSRKCFRMIGGVLVERTIKEVLPAVQRNKDGLEEVVRKLYETLEKKKKDLTEFEAKYKIRITKQE-DNKEGGNKKEGNAQGVLVGAASSSQ 148
BLAST of CV886750 vs. ExPASy Swiss-Prot
Match: PFD2_HUMAN (Prefoldin subunit 2 OS=Homo sapiens GN=PFDN2 PE=1 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.558e-26 Identity = 61/131 (46.56%), Postives = 89/131 (67.94%), Query Frame = -3 Query: 162 EQIVANMYTSMRSELNQIYSKITELEMEASEHSLVINAIKPLDPSRKCYRMIGGVPVERTISEVLPAVQRNKEGIEEVIARLNEALAAKKKEISDFEAKYKIRI----RKPESESKDDGNRKEGSAQGVLV 542 EQ++A + +R E + SK ELEME +EHSLVI+ +K +D +RKCYRM+GGV VERT+ EVLPA++ NKE I+++I L + L AK KE+++F K+ IR+ KP ++ +G + S+ GVLV Sbjct: 24 EQVIAG-FNRLRQEQRGLASKAAELEMELNEHSLVIDTLKEVDETRKCYRMVGGVLVERTVKEVLPALENNKEQIQKIIETLTQQLQAKGKELNEFREKHNIRLMGEDEKPAAKENSEGAGAKASSAGVLV 153
BLAST of CV886750 vs. ExPASy Swiss-Prot
Match: PFD2_BOVIN (Prefoldin subunit 2 OS=Bos taurus GN=PFDN2 PE=2 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.558e-26 Identity = 61/131 (46.56%), Postives = 89/131 (67.94%), Query Frame = -3 Query: 162 EQIVANMYTSMRSELNQIYSKITELEMEASEHSLVINAIKPLDPSRKCYRMIGGVPVERTISEVLPAVQRNKEGIEEVIARLNEALAAKKKEISDFEAKYKIRI----RKPESESKDDGNRKEGSAQGVLV 542 EQ++A + +R E + SK ELEME +EHSLVI+ +K +D +RKCYRM+GGV VERT+ EVLPA++ NKE I+++I L + L AK KE+++F K+ IR+ KP ++ +G + S+ GVLV Sbjct: 24 EQVIAG-FNRLRQEQRGLASKAAELEMELNEHSLVIDTLKEVDETRKCYRMVGGVLVERTVKEVLPALENNKEQIQKIIETLTQQLQAKGKELNEFREKHNIRLMGEDEKPAAKENSEGAGAKASSAGVLV 153
BLAST of CV886750 vs. ExPASy Swiss-Prot
Match: PFD2_RAT (Prefoldin subunit 2 OS=Rattus norvegicus GN=Pfdn2 PE=2 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.340e-26 Identity = 61/131 (46.56%), Postives = 90/131 (68.70%), Query Frame = -3 Query: 162 EQIVANMYTSMRSELNQIYSKITELEMEASEHSLVINAIKPLDPSRKCYRMIGGVPVERTISEVLPAVQRNKEGIEEVIARLNEALAAKKKEISDFEAKYKIRI----RKPESESKDDGNRKEGSAQGVLV 542 EQ++A + +R E + SK ELEME +EHSLVI+ +K +D +RKCYRM+GGV VERT+ EVLPA++ NKE I+++I L++ L AK KE+++F K+ IR+ KP ++ +G + S+ GVLV Sbjct: 24 EQVIAG-FNRLRQEQRGLASKAAELEMELNEHSLVIDTLKEVDETRKCYRMVGGVLVERTVKEVLPALEGNKEQIQKIIETLSQQLQAKGKELNEFREKHNIRLMGEDEKPAAKENSEGAGAKSSSAGVLV 153
BLAST of CV886750 vs. ExPASy Swiss-Prot
Match: PFD2_MOUSE (Prefoldin subunit 2 OS=Mus musculus GN=Pfdn2 PE=2 SV=2) HSP 1 Score: 118.627 bits (296), Expect = 3.340e-26 Identity = 61/131 (46.56%), Postives = 90/131 (68.70%), Query Frame = -3 Query: 162 EQIVANMYTSMRSELNQIYSKITELEMEASEHSLVINAIKPLDPSRKCYRMIGGVPVERTISEVLPAVQRNKEGIEEVIARLNEALAAKKKEISDFEAKYKIRI----RKPESESKDDGNRKEGSAQGVLV 542 EQ++A + +R E + SK ELEME +EHSLVI+ +K +D +RKCYRM+GGV VERT+ EVLPA++ NKE I+++I L++ L AK KE+++F K+ IR+ KP ++ +G + S+ GVLV Sbjct: 24 EQVIAG-FNRLRQEQRGLASKAAELEMELNEHSLVIDTLKEVDETRKCYRMVGGVLVERTVKEVLPALEGNKEQIQKIIETLSQQLQAKGKELNEFREKHNIRLMGEDEKPAAKENSEGAGAKASSAGVLV 153
BLAST of CV886750 vs. ExPASy Swiss-Prot
Match: PFD2_DICDI (Probable prefoldin subunit 2 OS=Dictyostelium discoideum GN=pfdn2 PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.075e-24 Identity = 51/112 (45.54%), Postives = 84/112 (75.00%), Query Frame = -3 Query: 231 TERREPVNEQIVANMYTSMRSELNQIYSKITELEMEASEHSLVINAIKPLDPSRKCYRMIGGVPVERTISEVLPAVQRNKEGIEEVIARLNEALAAKKKEISDFEAKYKIRI 566 +++++ + E + Y ++S+ QI S+I+E E + E+ LVINAI+ L+ +RKC+RM+GGV VERT+ EVLP +++N++GI+EV+ +L+E L+ K KE++DF A YKI+I Sbjct: 2 SQQKQQLTENQIIEHYKDLKSQQQQIISRISEFESDVGEYGLVINAIQNLESNRKCFRMVGGVLVERTVGEVLPQIKQNRDGIKEVVKKLDENLSIKTKELNDFVALYKIKI 113
BLAST of CV886750 vs. ExPASy Swiss-Prot
Match: PFD2_DROME (Probable prefoldin subunit 2 OS=Drosophila melanogaster GN=l(3)01239 PE=1 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 9.118e-16 Identity = 40/114 (35.09%), Postives = 68/114 (59.65%), Query Frame = -3 Query: 228 TERREP-VNEQIVANMYTSMRSELNQIYSKITELEMEASEHSLVINAIKPLDPSRKCYRMIGGVPVERTISEVLPAVQRNKEGIEEVIARLNEALAAKKKEISDFEAKYKIRIR 566 TE +P ++++ + + +R+E + + + LEM+ EH VI ++ DP RKC+R IGGV ERT+ EVLP + NK+ I + I + L+ K E++ F+ ++ I+IR Sbjct: 3 TESAKPALSQEAIVAQFQQLRNEQRNLVNSLNTLEMDLREHKTVIETLEAADPERKCFRQIGGVLCERTVKEVLPQLVENKDFIAKTIQMVTNDLSKKGSELNKFKEEHNIKIR 116
BLAST of CV886750 vs. ExPASy Swiss-Prot
Match: PFD2_SCHPO (Probable prefoldin subunit 2 OS=Schizosaccharomyces pombe GN=SPAC227.10 PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.555e-15 Identity = 40/108 (37.04%), Postives = 65/108 (60.19%), Query Frame = -3 Query: 231 EPVNEQIVANMYTSMRSELNQIYSKITELEMEASEHSLVINAIKPLDPSRKCYRMIGGVPVERTISEVLPAVQRNKEGIEEVIARLNEALAAKKKEISDFEAKYKIRI 554 +P +QI+ Y S +S L QI KI +LE +A EH LV++ + +D +R+C+RMI GV VERT+ V+P ++ +EGI+ + L + + E F+ KI++ Sbjct: 4 QPSRQQILQTQYNSYKSRLQQIAQKIVDLETDADEHKLVMDTLNSMDNNRRCFRMIHGVLVERTVGTVVPILKTTQEGIQTAMNGLLDQYKQLEAEFQKFQKDNKIQV 111
BLAST of CV886750 vs. ExPASy Swiss-Prot
Match: PFD2_YEAST (Prefoldin subunit 2 OS=Saccharomyces cerevisiae GN=GIM4 PE=1 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 1.456e-13 Identity = 37/99 (37.37%), Postives = 57/99 (57.58%), Query Frame = -3 Query: 225 YTSMRSELNQIYSKITELEMEASEHSLVINAIKPLDPSRKCYRMIGGVPVERTISEVLPAVQRNKEGIEEVIARLNEALAAKKKEISDFEAKYKIRIRK 521 Y + L ++ +KI EL + EH++VI +K +P+RKCYRMIGG VE + LP ++ KE IE I+++ E L KE ++ KI++ K Sbjct: 12 YNEYKQILEELQTKIIELGHDKDEHTIVIKTLKDAEPTRKCYRMIGGALVESDVQTSLPILETKKENIEGTISKMKETLIQTAKEFEKWKKDNKIQVVK 110
BLAST of CV886750 vs. ExPASy Swiss-Prot
Match: PFD2_CAEEL (Probable prefoldin subunit 2 OS=Caenorhabditis elegans GN=tag-355 PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.964e-11 Identity = 33/108 (30.56%), Postives = 60/108 (55.56%), Query Frame = -3 Query: 231 EPVNEQIVANMYTSMRSELNQIYSKITELEMEASEHSLVINAIKPLDPSRKCYRMIGGVPVERTISEVLPAVQRNKEGIEEVIARLNEALAAKKKEISDFEAKYKIRI 554 E ++ V + ++R + I +++T +E E E V+ IK L+P +KC+R+I VE T+ +V+P +Q N + V +LN+ L K KE++ + + IR+ Sbjct: 13 EQEEQRKVVEKFKALRDQQQDIAAEVTRIEEERREFGRVLEVIKDLEPDQKCFRLISDTLVEYTVKDVIPDLQNNIANLTIVSKQLNDQLVEKGKELNTHKTTHNIRL 120 The following BLAST results are available for this feature:
BLAST of CV886750 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CV886750 ID=CV886750; Name=CV886750; organism=Citrus sinensis; type=EST; length=724bpback to top |