CV886745

Overview
NameCV886745
Unique NameCV886745
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length693
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV886745 vs. ExPASy Swiss-Prot
Match: GSTU6_ORYSJ (Probable glutathione S-transferase GSTU6 OS=Oryza sativa subsp. japonica GN=GSTU6 PE=2 SV=2)

HSP 1 Score: 228.409 bits (581), Expect = 2.791e-59
Identity = 113/219 (51.60%), Postives = 150/219 (68.49%), Query Frame = 2
Query:    5 SPFVMRARIALKIKSVEYEFLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWSSSG---PSILPSDPYDRAVARFWAAYVDEKLFPA-LKSIGSADGAEAKEAAIEQLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLGWVRVTEKMIEVKLLDEVKTPGLFKWAERFCADAAVKDVMP-ETDKLAEFAKVLAKLRAS 646
            SP+ +R R+ L +KS+ YE++EENLG KS+LLL SNPVHK +PVL+H  +PV ES +IV+Y+DE W       PS++PSDPY+RAVARFWAAYVD+K+ PA L  +  +   E + AA+ Q +  L  LE AF +CSKGKPFFGG  +GF+D+  G YLGW    +K+I  +L+D  +TP L  W ERF A  A K V+P + DKL EF + L +  AS
Sbjct:   15 SPYAIRVRVVLNLKSLPYEYVEENLGDKSDLLLASNPVHKSVPVLLHAGRPVNESQVIVQYIDEVWPGGAGGRPSVMPSDPYERAVARFWAAYVDDKVRPAWLAILFGSKTEEERAAAVAQAVAALETLEGAFGECSKGKPFFGGDGVGFVDVVLGGYLGWFTAIDKLIGRRLIDPARTPALAAWEERFRATDAAKGVVPDDADKLLEFRQTLLRWSAS 233          
BLAST of CV886745 vs. ExPASy Swiss-Prot
Match: GSTX6_SOYBN (Probable glutathione S-transferase OS=Glycine max GN=HSP26-A PE=2 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 8.424e-48
Identity = 97/207 (46.86%), Postives = 139/207 (67.15%), Query Frame = 2
Query:    5 SPFVMRARIALKIKSVEYEFLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILPSDPYDRAVARFWAAYVDEKLFPAL-KSIGSADGAEAKEAAIEQLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLGWVRVTEKMIEVKLLDEVKTPGLFKWAERFCADAAVKDVMPETDKLAEFAK 622
            SPFV R +IALK+K VEY+FLEENLG+KS+LLLK NPVHKK+PV +HN++P+ ESL+IVEY+DE W ++   ILPSDPY RA+ARFW+ ++D+K+  A+ KS+ + D  E +E  +E+  E L  LE+      K K FFGG + G +DIA      W+ + +++  ++L    K P L+KW++ F     V +V+P  D L  + K
Sbjct:   16 SPFVCRVQIALKLKGVEYKFLEENLGNKSDLLLKYNPVHKKVPVFVHNEQPIAESLVIVEYIDETWKNN--PILPSDPYQRALARFWSKFIDDKIVGAVSKSVFTVDEKE-REKNVEETYEALQFLENEL----KDKKFFGGEEFGLVDIAAVFIAFWIPIFQEIAGLQLFTSEKFPILYKWSQEFLNHPFVHEVLPPRDPLFAYFK 215          
BLAST of CV886745 vs. ExPASy Swiss-Prot
Match: GSTX4_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 2.710e-46
Identity = 99/209 (47.37%), Postives = 129/209 (61.72%), Query Frame = 2
Query:    2 PSPFVMRARIALKIKSVEYEFLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILPSDPYDRAVARFWAAYVDEKLFPALKSIGSADGAEAKEAAIEQLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLGWVRVTEKMIEVKLLDEVKTPGLFKWAERFCADAAVKDVMPETDKLAEFAKVL 628
            PS F MR RIAL  K ++YE+ EE+L +KS LLL+ NP+HKKIPVLIHN KP+CES+I VEY++E W    P++LPSDPYDRA ARFWA Y+D+KL+   + + +  G E +EAA +  IE L +LE A       KP+FGG   GF+DIA   Y  W    E         E + P    WA+R     +V   +P+  K+ EF KVL
Sbjct:   13 PSMFGMRLRIALAEKEIKYEYKEEDLRNKSPLLLQMNPIHKKIPVLIHNGKPICESIIAVEYIEEVWKDKAPNLLPSDPYDRAQARFWADYIDKKLYDFGRKLWTTKG-EEQEAAKKDFIECLKVLEGAL----GDKPYFGGESFGFVDIALIGYYSWFYAYETF--GNFSTEAECPKFVAWAKRCMQRESVAKSLPDQPKVLEFVKVL 214          
BLAST of CV886745 vs. ExPASy Swiss-Prot
Match: GSTXC_TOBAC (Probable glutathione S-transferase parC OS=Nicotiana tabacum GN=PARC PE=2 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 1.756e-45
Identity = 97/209 (46.41%), Postives = 129/209 (61.72%), Query Frame = 2
Query:    2 PSPFVMRARIALKIKSVEYEFLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILPSDPYDRAVARFWAAYVDEKLFPALKSIGSADGAEAKEAAIEQLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLGWVRVTEKMIEVKLLDEVKTPGLFKWAERFCADAAVKDVMPETDKLAEFAKVL 628
            PS F MR RIAL  K ++YE+ +E+L +KS LLL+ NP+HKKIPVLIHN KP+CES+I VEY++E W    PS+LPSDPYDRA ARFWA Y+D+KL+   + + +  G E +EAA +  IE L +LE A       +P+FGG   GF+DIA   +  W    E         E + P    WA+R     +V   +P+  K+ EF KVL
Sbjct:   13 PSMFGMRLRIALAEKEIKYEYKQEDLRNKSPLLLQMNPIHKKIPVLIHNGKPICESIIAVEYIEEVWKDKAPSLLPSDPYDRAQARFWADYIDKKLYDFGRKLWATKG-EEQEAAKKDFIECLKVLEGAL----GDRPYFGGESFGFVDIALIGFYSWFYAYETF--GNFSTEAECPKFVAWAKRCMQRESVAKSLPDQPKVLEFVKVL 214          
BLAST of CV886745 vs. ExPASy Swiss-Prot
Match: GSTX2_MAIZE (Probable glutathione S-transferase BZ2 OS=Zea mays GN=BZ2 PE=3 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 1.818e-42
Identity = 93/217 (42.86%), Postives = 136/217 (62.67%), Query Frame = 2
Query:    5 SPFVMRARIALKIKSVEYEFLEENLG-SKSELLLKSNPVHKKIPVLIHND-KPVCESLIIVEYVDEAWSSSGPS-----ILPSDPYDRAVARFWAAYVDEKLFPALKSIGSADGAEAKEAAIEQLIEGLVLLEDAFVKCSKGKPFFGGSQI--GFLDIAFGCYLGWVRVTEKMIEVKLLDEVKTPGLFKWAERFCADAAVKDVMPETDKLAEFAKVL 628
            SPF  RAR+AL ++ V YE L+E LG  KS+ LL +NPV+ KIPVL+  D + +CES +IV+Y+++    SG +     +LP DPY+RA+ RFW A++D+K +PAL ++  A    A+  A E     L LLE+AF   S G+ FF G     G LD+A GC+L  +R  E++  + L+D   TP L  W++RF A  A K V+P+T+K+ +F + L
Sbjct:    9 SPFTARARLALDLRGVAYELLDEPLGPKKSDRLLAANPVYGKIPVLLLPDGRAICESAVIVQYIEDVARESGGAEAGSLLLPDDPYERAMHRFWTAFIDDKFWPALDAVSLAPTPGARAQAAEDTRAALSLLEEAFKDRSNGRAFFSGGDAAPGLLDLALGCFLPALRACERLHGLSLIDASATPLLDGWSQRFAAHPAAKRVLPDTEKVVQFTRFL 225          
BLAST of CV886745 vs. ExPASy Swiss-Prot
Match: GSTX1_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 6.465e-40
Identity = 89/204 (43.63%), Postives = 126/204 (61.76%), Query Frame = 2
Query:    5 SPFVMRARIALKIKSVEYEFLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILPSDPYDRAVARFWAAYVDEKLFPALKSIGSADGAEAKEAAIEQLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLGWVRVTEKMIEVKLLDEVKTPGLFKWAERFCADAAVKDVMPETDKLAEF 616
            SPF  R   ALKIK V+YE++EE+  +KS LLL+SNP+HKK+PVLIHN K + ES++I+EY+DE +   GPSILP DPYDRA+ARFWA ++D+K+   +K+       E +E   E++ E L +L++      K K FF G + GF DIA      W+ V E+   V L+   K P   KW   +   + +K+ +P  D+L  F
Sbjct:   12 SPFSRRVEWALKIKGVKYEYIEEDRDNKSSLLLQSNPIHKKVPVLIHNGKRIVESMVILEYIDETF--EGPSILPKDPYDRALARFWAKFLDDKVPAVVKTF--LRKGEEQEKDKEEVCEMLKVLDNEL----KDKKFFVGDKFGFADIAANLVAFWLGVFEEASGVVLVTSEKFPNFCKWRGEYINCSQIKESLPPRDELLAF 207          
BLAST of CV886745 vs. ExPASy Swiss-Prot
Match: GSTX3_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 8.443e-40
Identity = 91/218 (41.74%), Postives = 132/218 (60.55%), Query Frame = 2
Query:    5 SPFVMRARIALKIKSVEYEFLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILPSDPYDRAVARFWAAYVDEKLFPALKSIGSADGAEAKEAAIEQLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLGWVRVTEKMIEVKLLDEVKTPGLFKWAERFCADAAVKDVMPETDKL-----AEFAKVLAKLRA 643
            SPF  R   ALK+K V+YE++EE+  +KS LLL+SNPVHKK+PVLIHN KP+ ES++I+EY+DE +   GPSILP DPYDRA+ARFW+ ++ +K+   + +       E +E   E++ E L +L++      K K FF G + GF DIA      W+ V E+   V L+   K P   +W + +   + VK+ +P  D+L     A F  V+A + A
Sbjct:   12 SPFTHRVEWALKLKGVKYEYIEEDRDNKSSLLLQSNPVHKKVPVLIHNGKPIVESMVILEYIDETF--EGPSILPKDPYDRALARFWSKFLGDKVAAVVNTFFRK--GEEQEKGKEEVYEMLKVLDNEL----KDKKFFVGDKFGFADIAANLVGFWLGVFEEGYGVVLVTSEKFPNFSRWRDEYINCSQVKESLPSRDELLAFFRARFQAVVASISA 221          
BLAST of CV886745 vs. ExPASy Swiss-Prot
Match: GSTX1_SOLTU (Probable glutathione S-transferase OS=Solanum tuberosum GN=PRP1 PE=2 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.440e-39
Identity = 92/201 (45.77%), Postives = 124/201 (61.69%), Query Frame = 2
Query:    5 SPFVMRARIALKIKSVEYEFLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILPSDPYDRAVARFWAAYVDEKLFPALKSIGSADGAEAKEAAIEQLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLGWVRVTEKMIEVKLLDEVKTPGLFKWAERFCADAAVKDVMPETDKL 607
            SPF  R   ALKIK V+YEF+EE+L +KS LLL+SNP+HKKIPVLIHN K +CES++I+EY+DEA+   GPSILP DPYDRA+ARFWA YV++K     KS  S    E +E A E+  E L +L++ F    K K  F G + GF DI       ++ + E++  + L    K P    W + +C     ++  P  D+L
Sbjct:   12 SPFSHRVEWALKIKGVKYEFIEEDLQNKSPLLLQSNPIHKKIPVLIHNGKCICESMVILEYIDEAF--EGPSILPKDPYDRALARFWAKYVEDKGAAVWKSFFSK--GEEQEKAKEEAYEMLKILDNEF----KDKKCFVGDKFGFADIVANGAALYLGILEEVSGIVLATSEKFPNFCAWRDEYCTQN--EEYFPSRDEL 202          
BLAST of CV886745 vs. ExPASy Swiss-Prot
Match: GSTXA_TOBAC (Probable glutathione S-transferase parA OS=Nicotiana tabacum GN=PARA PE=2 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 2.457e-39
Identity = 89/205 (43.41%), Postives = 120/205 (58.54%), Query Frame = 2
Query:    2 PSPFVMRARIALKIKSVEYEFLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILPSDPYDRAVARFWAAYVDEKLFPALKSIGSADGAEAKEAAIEQLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLGWVRVTEKMIEVKLLDEVKTPGLFKWAERFCADAAVKDVMPETDKLAEF 616
            PS F MR RIAL +K ++YE  EENL  KS LLL+ NPVHKKIP+LIHN K +CESL I+EY+DE W    P +LPSDPY+R+ ARFWA Y+D+K++   + + S  G E +E A ++ IE L  LE         K +FGG  +GF+D+A   +  W    E      +  E + P L  WA+      +V   +P   K+  F
Sbjct:   13 PSSFGMRLRIALALKGIKYEAKEENLSDKSPLLLEMNPVHKKIPILIHNSKAICESLNILEYIDEVWHDKCP-LLPSDPYERSQARFWADYIDKKIYSTGRRVWSGKG-EDQEEAKKEFIEILKTLEGEL----GNKTYFGGDNLGFVDVALVPFTSWFYSYETCANFSI--EAECPKLVVWAKTCMESESVSKSLPHPHKIYGF 209          
BLAST of CV886745 vs. ExPASy Swiss-Prot
Match: GSTX2_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 2.457e-39
Identity = 89/204 (43.63%), Postives = 125/204 (61.27%), Query Frame = 2
Query:    5 SPFVMRARIALKIKSVEYEFLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILPSDPYDRAVARFWAAYVDEKLFPALKSIGSADGAEAKEAAIEQLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLGWVRVTEKMIEVKLLDEVKTPGLFKWAERFCADAAVKDVMPETDKLAEF 616
            SPF  R   ALKIK V+YE++EE+  +KS LLL+SNPV+KK+PVLIHN KP+ ES+II+EY+DE +   GPSILP DPYDRA+ARFWA ++D+K+   + +       E +E   E++ E L +L++      K K FF G + GF DIA      W+ V E+     L+   K P   KW + +   + V + +P  D+L  F
Sbjct:   12 SPFSHRVEWALKIKGVKYEYIEEDRDNKSSLLLQSNPVYKKVPVLIHNGKPIVESMIILEYIDETF--EGPSILPKDPYDRALARFWAKFLDDKVAAVVNTFFRK--GEEQEKGKEEVYEMLKVLDNEL----KDKKFFAGDKFGFADIAANLVGFWLGVFEEGYGDVLVKSEKFPNFSKWRDEYINCSQVNESLPPRDELLAF 207          
The following BLAST results are available for this feature:
BLAST of CV886745 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
GSTU6_ORYSJ2.791e-5951.60Probable glutathione S-transferase GSTU6 OS=Oryza ... [more]
GSTX6_SOYBN8.424e-4846.86Probable glutathione S-transferase OS=Glycine max ... [more]
GSTX4_TOBAC2.710e-4647.37Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTXC_TOBAC1.756e-4546.41Probable glutathione S-transferase parC OS=Nicotia... [more]
GSTX2_MAIZE1.818e-4242.86Probable glutathione S-transferase BZ2 OS=Zea mays... [more]
GSTX1_TOBAC6.465e-4043.63Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTX3_TOBAC8.443e-4041.74Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTX1_SOLTU1.440e-3945.77Probable glutathione S-transferase OS=Solanum tube... [more]
GSTXA_TOBAC2.457e-3943.41Probable glutathione S-transferase parA OS=Nicotia... [more]
GSTX2_TOBAC2.457e-3943.63Probable glutathione S-transferase OS=Nicotiana ta... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS04_2_024H12_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_024_T3_H12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV886745 ID=CV886745; Name=CV886745; organism=Citrus sinensis; type=EST; length=693bp
GCCAAGCCCATTTGTGATGAGGGCAAGAATCGCACTTAAGATCAAGTCTG
TGGAGTATGAGTTTCTGGAGGAGAATTTGGGATCCAAAAGCGAGCTTCTG
CTTAAATCAAACCCTGTTCACAAGAAAATCCCAGTTCTGATTCACAATGA
TAAGCCTGTTTGCGAATCTCTCATCATTGTCGAGTACGTGGATGAGGCTT
GGTCCTCTTCAGGTCCCTCTATTCTTCCTTCTGATCCTTATGACCGTGCC
GTTGCTCGTTTCTGGGCCGCTTATGTTGATGAGAAGTTGTTCCCTGCCTT
GAAAAGCATTGGTAGTGCAGATGGAGCGGAAGCTAAGGAAGCTGCGATTG
AGCAATTGATTGAAGGCTTGGTTTTGCTGGAGGATGCTTTTGTTAAGTGT
AGCAAAGGGAAGCCTTTCTTTGGTGGAAGCCAAATTGGGTTTCTTGACAT
TGCATTTGGTTGCTACTTGGGATGGGTGAGAGTGACAGAGAAAATGATTG
AGGTGAAGCTCCTTGATGAAGTCAAAACTCCTGGACTGTTCAAATGGGCT
GAGAGATTCTGTGCTGATGCCGCTGTCAAAGATGTTATGCCTGAGACTGA
TAAGCTTGCAGAGTTTGCTAAGGTTCTTGCCAAACTCAGAGCTTCTGGCA
AATGGAATTAAGAAGCTTAATTCTGTGCTTGGAGGGGCACAAA
back to top