CV886742

Overview
NameCV886742
Unique NameCV886742
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length931
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CV886742 vs. ExPASy Swiss-Prot
Match: Y5994_ARATH (Uncharacterized protein At5g49945 OS=Arabidopsis thaliana GN=At5g49945 PE=1 SV=1)

HSP 1 Score: 276.174 bits (705), Expect = 1.893e-73
Identity = 132/183 (72.13%), Postives = 165/183 (90.16%), Query Frame = -2 
Query:  376 GLMAAPSGGGKKWVADELGVFSESKEVAGDLITDTVLEQVFGEKAFEKHGKDFISMHFSDQHPGTHRKMLLFKFALPDANNMADMTRLVALVPYYIDLIGRYKLSPQARSKTEAARQKAAQEAYKELQNARQEALQRKKADRKKMIEEADAKLSAEAIRKKEAKERARQMKKAVPKMKMTRGH 924
            G+++ P+G  +KWV++E  + SESKEVA DLITDTVL+QVFG+KA +K+GK+F+SMH SDQHPG H+KM+LFKF+LPDA +M D+ RLVAL+PYYIDL+GRY+LS QAR+KTE+ RQKAA+EAYKEL NARQEALQ+KKA++KKM+EEA+AK+SAE IRKKEAKERARQ+KKAVPKMKM+R H
Sbjct:  300 GIVSPPAG--RKWVSEEFALISESKEVAADLITDTVLDQVFGDKAVDKYGKNFMSMHISDQHPGKHKKMMLFKFSLPDAKHMDDIVRLVALIPYYIDLVGRYRLSSQARNKTESGRQKAAEEAYKELHNARQEALQKKKAEKKKMMEEAEAKMSAEVIRKKEAKERARQVKKAVPKMKMSRSH 480
The following BLAST results are available for this feature:
BLAST of CV886742 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y5994_ARATH1.893e-7372.13Uncharacterized protein At5g49945 OS=Arabidopsis t... [more]
back to top
Properties
Property NameValue
Genbank descriptionUCRCS04_2_024H10_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_024_T7_H10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV886742 ID=CV886742; Name=CV886742; organism=Citrus sinensis; type=EST; length=931bp
TTTTTTTTTTTTATCTATATACCGAGAAAATTACTTAACTGGGGTAAGTA
TTCCAACAAACGAATCAGACATTAAAGCACCGAAAAGTATAATATCGCTA
AGAAAATGCTCCAAAACTATGTAAAACAGGTGTCCATGATAAGCTTTATA
AAGGTTTCTAAAGGACTAAACTTGGGTGCACTTCAAAAACCACAGAGATG
TGGTAATGCTGGAGACTAGCTAATACAATTTGACAAAAGTACATTTGCCA
GGAGGATACATGAGAAGGCCAAGAACCTATGTAAAGGCTAGGTAGGCCAA
GTATGACACAAAAAATAGAGATAAAACTAGAAGGCAAATTCCAGAGTGCC
ACATGACAGAGCAGGAAATTGACTAGTGACCTCGGGTCATCTTCATCTTC
GGCACAGCTTTCTTCATCTGACGAGCACGCTCTTTCGCTTCCTTCTTGCG
AATAGCCTCTGCAGATAGCTTTGCATCTGCCTCCTCAATCATCTTCTTCC
TATCTGCCTTCTTTCTCTGCAAGGCTTCCTGCCTAGCATTTTGAAGTTCT
TTGTATGCCTCTTGGGCTGCCTTCTGTCTGGCTGCCTCTGTTTTAGATCG
AGCCTGTGGACTGAGCTTGTAACGTCCGATCAAATCAATGTAATAGGGTA
CAAGAGCAACCAATCGAGTCATATCAGCCATGTTGTTGGCATCAGGTAGG
GCAAACTTAAACAACAGCATCTTCCTATGTGTGCCAGGGTGTTGATCAGA
AAAATGCATTGATATGAAATCCTTTCCATGTTTTTCAAAAGCTTTTTCGC
CGAACACCTGTTCAAGCACAGTATCTGTGATCAAATCCCCAGCAACCTCC
TTACTCTCCGAAAACACACCCAATTCATCCGCCACCCACTTCTTCCCACC
ACCACTCGGCGCTGCCATCAACCCACCAGTA
back to top