CV886741

Overview
NameCV886741
Unique NameCV886741
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length866
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CV886741 vs. ExPASy Swiss-Prot
Match: Y5994_ARATH (Uncharacterized protein At5g49945 OS=Arabidopsis thaliana GN=At5g49945 PE=1 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 3.558e-47
Identity = 98/176 (55.68%), Postives = 114/176 (64.77%), Query Frame = 2 
Query:  380 FDYWDEDEFEGVPIQ--------------HPAPETDPTSIPEDALADQXXXXXXXXXXXXXXXXXXXXXXXXIEIVCVTFLIMFVINYFTGKRENENLALAWAAKFATKDSIFEKNFSLLGVGEGDDSPLLLKEGQNVFKFYASGRRYCSGLLATMELKSRHDLISRFYNMIVPCK 865
            F+YWDEDEFEG+P++              H  P+T       +A  D                         +EI CV FLI   INYF GKRENE+LALAWAAKFA+KD+IF+KNFS+LGV E +DSPLLLKE  NVFKFYASGRRYC GLLATMELKSRHDLISR +N++VPCK
Sbjct:   96 FEYWDEDEFEGLPVEIETLESPLITENGTHADPKTPDLKTSSEAQGDTNDQTKKKKSYA-------------VEIACVCFLIALAINYFVGKRENESLALAWAAKFASKDTIFQKNFSMLGVSELEDSPLLLKEALNVFKFYASGRRYCHGLLATMELKSRHDLISRVFNLVVPCK 258
The following BLAST results are available for this feature:
BLAST of CV886741 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y5994_ARATH3.558e-4755.68Uncharacterized protein At5g49945 OS=Arabidopsis t... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS04_2_024H10_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_024_T3_H10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV886741 ID=CV886741; Name=CV886741; organism=Citrus sinensis; type=EST; length=866bp
GTCTCTCGTAAAACTCACCAGCCCAACAACCCCCAAAAACTGAGTACTCC
AATCGTCCAAAATGACGCACGTGCGCCTTTTGATTCTCTCTCTCTTACTC
ATCTCTCTTTCCTTCACGCCCCCCCGCGCCGCCGCCACTACCGACTCCCA
CTTCGAAGGCTTCGACGCCGAAGACGACGTCGTCGAGGAGGACGACGAAC
AAACCCTAGACCTCCACAAACTCACCGATCTCCCCTTAACCCAATCCGAT
CCCTCATCATCACCACCCATCACAACAACCACTCCAGATACGAACCCAGA
TCCGAACCCGAACCCGACTCCCTCCCCCTCGGATCCCCAATCTAAAACCC
CTTCCTCCTCCCCGTCCCAAACGACGTCGTTTGACTACTGGGACGAAGAC
GAGTTCGAAGGCGTACCTATCCAACACCCCGCTCCCGAAACCGACCCGAC
GTCAATTCCCGAAGATGCCCTCGCCGATCAAACCACTTCGGAAAGCAAAA
CGACGGGGGAATCCAAAAACGTGGCCGTTTCGAAGAAATCCTCGTCGTAC
AAGATCGAGATTGTCTGCGTTACTTTTTTGATCATGTTTGTGATTAATTA
CTTCACTGGCAAGCGCGAGAATGAGAATCTGGCGCTTGCTTGGGCGGCGA
AGTTTGCGACAAAAGATTCGATTTTCGAGAAGAATTTCAGCTTGTTAGGC
GTGGGAGAAGGCGATGACTCGCCGTTGCTGTTGAAGGAAGGGCAGAACGT
GTTCAAATTCTACGCGAGCGGGCGGAGGTACTGTTCGGGGCTGTTGGCCA
CGATGGAGCTGAAGAGCAGGCACGATTTGATATCGAGGTTTTATAACATG
ATCGTGCCTTGCAAGG
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